RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 NPC1L1Q9UHC9 1359 aa18.85■□□□□ 0.61
TUBB3-202ENST00000553656 MAP3K19Q56UN5 1328 aa18.85■□□□□ 0.61
TUBB3-202ENST00000553656 CNGB1Q14028 1251 aaPredicted RBP18.85■□□□□ 0.61
TUBB3-202ENST00000553656 RRS1Q15050 365 aaKnown RBP18.85■□□□□ 0.61
TUBB3-202ENST00000553656 NRAPQ86VF7 1730 aa18.85■□□□□ 0.61
TUBB3-202ENST00000553656 CAMTA1Q9Y6Y1 1673 aa18.85■□□□□ 0.61
TUBB3-202ENST00000553656 ATRNO75882 1429 aa18.84■□□□□ 0.61
TUBB3-202ENST00000553656 POTEAQ6S8J7 498 aa18.84■□□□□ 0.61
TUBB3-202ENST00000553656 COL5A2P05997 1499 aaPredicted RBP18.84■□□□□ 0.61
TUBB3-202ENST00000553656 RTL1A6NKG5 1358 aa18.83■□□□□ 0.61
TUBB3-202ENST00000553656 CSB-PGBD3P0DP91 1061 aa18.83■□□□□ 0.6
TUBB3-202ENST00000553656 FBLN1P23142 703 aa18.83■□□□□ 0.6
TUBB3-202ENST00000553656 RXRBP28702 533 aa18.83■□□□□ 0.6
TUBB3-202ENST00000553656 VPS72Q15906 364 aa18.83■□□□□ 0.6
TUBB3-202ENST00000553656 BLMP54132 1417 aaPredicted RBP18.83■□□□□ 0.6
TUBB3-202ENST00000553656 PPM1GO15355 546 aaPredicted RBP18.82■□□□□ 0.6
TUBB3-202ENST00000553656 RBM6P78332 1123 aaKnown RBP18.82■□□□□ 0.6
TUBB3-202ENST00000553656 IP6K1Q92551 441 aa18.82■□□□□ 0.6
TUBB3-202ENST00000553656 COL18A1P39060 1754 aa18.82■□□□□ 0.6
TUBB3-202ENST00000553656 KIF24Q5T7B8 1368 aa18.81■□□□□ 0.6
TUBB3-202ENST00000553656 GJD4Q96KN9 370 aaPredicted RBP18.81■□□□□ 0.6
TUBB3-202ENST00000553656 AXIN2Q9Y2T1 843 aa18.81■□□□□ 0.6
TUBB3-202ENST00000553656 HOXC9P31274 260 aa18.8■□□□□ 0.6
TUBB3-202ENST00000553656 FLT4P35916 1363 aa18.8■□□□□ 0.6
TUBB3-202ENST00000553656 LARP1Q6PKG0 1096 aaKnown RBP18.79■□□□□ 0.6
TUBB3-202ENST00000553656 TOM1L2Q6ZVM7 507 aa18.79■□□□□ 0.6
TUBB3-202ENST00000553656 WDR17Q8IZU2 1322 aa18.78■□□□□ 0.6
TUBB3-202ENST00000553656 SMG6Q86US8 1419 aaKnown RBP18.78■□□□□ 0.6
TUBB3-202ENST00000553656 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
TUBB3-202ENST00000553656 RGPD5Q99666 1765 aa18.78■□□□□ 0.6
TUBB3-202ENST00000553656 ERBB3P21860 1342 aa18.77■□□□□ 0.6
TUBB3-202ENST00000553656 SPATA31A5Q5VU36 1347 aa18.77■□□□□ 0.6
TUBB3-202ENST00000553656 SPATA31A7Q8IWB4 1347 aa18.77■□□□□ 0.6
TUBB3-202ENST00000553656 CRB1P82279 1406 aa18.77■□□□□ 0.6
TUBB3-202ENST00000553656 ANKRD24Q8TF21 1146 aa18.77■□□□□ 0.6
TUBB3-202ENST00000553656 LTV1Q96GA3 475 aaPredicted RBP18.77■□□□□ 0.6
TUBB3-202ENST00000553656 USP35Q9P2H5 1018 aa18.77■□□□□ 0.6
TUBB3-202ENST00000553656 POLKQ9UBT6 870 aa18.77■□□□□ 0.6
TUBB3-202ENST00000553656 MAP2P11137 1827 aaKnown RBP18.77■□□□□ 0.59
TUBB3-202ENST00000553656 SPATA31A1Q5TZJ5 1347 aa18.75■□□□□ 0.59
TUBB3-202ENST00000553656 A0A0G2JS52 829 aa18.75■□□□□ 0.59
TUBB3-202ENST00000553656 MYT1Q01538 1121 aa18.75■□□□□ 0.59
TUBB3-202ENST00000553656 INSRP06213 1382 aa18.75■□□□□ 0.59
TUBB3-202ENST00000553656 GLI3P10071 1580 aa18.75■□□□□ 0.59
TUBB3-202ENST00000553656 PEAK1Q9H792 1746 aa18.74■□□□□ 0.59
TUBB3-202ENST00000553656 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
TUBB3-202ENST00000553656 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
TUBB3-202ENST00000553656 NLRP2Q9NX02 1062 aa18.74■□□□□ 0.59
TUBB3-202ENST00000553656 FAM208AQ9UK61 1670 aaKnown RBP18.73■□□□□ 0.59
TUBB3-202ENST00000553656 CDK12Q9NYV4 1490 aaPredicted RBP18.73■□□□□ 0.59
TUBB3-202ENST00000553656 FAM98CQ17RN3 349 aaKnown RBP18.72■□□□□ 0.59
TUBB3-202ENST00000553656 CARD10Q9BWT7 1032 aa18.72■□□□□ 0.59
TUBB3-202ENST00000553656 THRAP3Q9Y2W1 955 aaKnown RBP18.72■□□□□ 0.59
TUBB3-202ENST00000553656 MTHFSP49914 203 aa18.7■□□□□ 0.58
TUBB3-202ENST00000553656 RGS12O14924 1447 aa18.69■□□□□ 0.58
TUBB3-202ENST00000553656 RALBP1Q15311 655 aa18.69■□□□□ 0.58
TUBB3-202ENST00000553656 BARGINQ6ZT62 677 aa18.69■□□□□ 0.58
TUBB3-202ENST00000553656 PARD3Q8TEW0 1356 aa18.68■□□□□ 0.58
TUBB3-202ENST00000553656 PPP2R1AP30153 589 aa18.67■□□□□ 0.58
TUBB3-202ENST00000553656 SEPT12Q8IYM1 358 aa18.67■□□□□ 0.58
TUBB3-202ENST00000553656 CFAP53Q96M91 514 aa18.67■□□□□ 0.58
TUBB3-202ENST00000553656 CDCA7Q9BWT1 371 aaPredicted RBP18.67■□□□□ 0.58
TUBB3-202ENST00000553656 ONECUT3O60422 494 aaPredicted RBP18.66■□□□□ 0.58
TUBB3-202ENST00000553656 ILDR2Q71H61 639 aa18.66■□□□□ 0.58
TUBB3-202ENST00000553656 EIF4A2Q14240 407 aaKnown RBP18.65■□□□□ 0.58
TUBB3-202ENST00000553656 THSD7AQ9UPZ6 1657 aa18.64■□□□□ 0.57
TUBB3-202ENST00000553656 NBPF6Q5VWK0 638 aa18.64■□□□□ 0.57
TUBB3-202ENST00000553656 NBPF4Q96M43 638 aa18.64■□□□□ 0.57
TUBB3-202ENST00000553656 IL2RBP14784 551 aa18.63■□□□□ 0.57
TUBB3-202ENST00000553656 WNK3Q9BYP7 1800 aa18.63■□□□□ 0.57
TUBB3-202ENST00000553656 DIAPH1O60610 1272 aaKnown RBP18.62■□□□□ 0.57
TUBB3-202ENST00000553656 USHBP1Q8N6Y0 703 aa18.62■□□□□ 0.57
TUBB3-202ENST00000553656 RAPGEF4Q8WZA2 1011 aa18.62■□□□□ 0.57
TUBB3-202ENST00000553656 RGPD2P0DJD1 1756 aa18.62■□□□□ 0.57
TUBB3-202ENST00000553656 MYBBP1AQ9BQG0 1328 aaKnown RBP18.61■□□□□ 0.57
TUBB3-202ENST00000553656 PDE3BQ13370 1112 aa18.61■□□□□ 0.57
TUBB3-202ENST00000553656 EYA1Q99502 592 aa18.61■□□□□ 0.57
TUBB3-202ENST00000553656 DISP2A7MBM2 1401 aa18.6■□□□□ 0.57
TUBB3-202ENST00000553656 DDB1Q16531 1140 aa18.6■□□□□ 0.57
TUBB3-202ENST00000553656 KRT27Q7Z3Y8 459 aa18.6■□□□□ 0.57
TUBB3-202ENST00000553656 PRKRIP1Q9H875 184 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-202ENST00000553656 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
TUBB3-202ENST00000553656 ANP32CO43423 234 aa18.59■□□□□ 0.57
TUBB3-202ENST00000553656 IL13P35225 146 aa18.59■□□□□ 0.57
TUBB3-202ENST00000553656 IGSF1Q8N6C5 1336 aa18.58■□□□□ 0.57
TUBB3-202ENST00000553656 EXOC5O00471 708 aa18.58■□□□□ 0.56
TUBB3-202ENST00000553656 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-202ENST00000553656 NUDCQ9Y266 331 aa18.58■□□□□ 0.56
TUBB3-202ENST00000553656 LRRC37A3O60309 1634 aa18.58■□□□□ 0.56
TUBB3-202ENST00000553656 BRWD3Q6RI45 1802 aa18.57■□□□□ 0.56
TUBB3-202ENST00000553656 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
TUBB3-202ENST00000553656 TNS2Q63HR2 1409 aa18.57■□□□□ 0.56
TUBB3-202ENST00000553656 MEGF6O75095 1541 aa18.56■□□□□ 0.56
TUBB3-202ENST00000553656 U2SURPO15042 1029 aaKnown RBP18.56■□□□□ 0.56
TUBB3-202ENST00000553656 NCAPD2Q15021 1401 aa18.56■□□□□ 0.56
TUBB3-202ENST00000553656 SULT6B1Q6IMI4 303 aa18.55■□□□□ 0.56
TUBB3-202ENST00000553656 OVOS2A0A0G2JMS6 1433 aa18.54■□□□□ 0.56
TUBB3-202ENST00000553656 RGPD1P0DJD0 1748 aa18.54■□□□□ 0.56
TUBB3-202ENST00000553656 ZCRB1Q8TBF4 217 aaKnown RBP18.52■□□□□ 0.56
TUBB3-202ENST00000553656 HMOX1P09601 288 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms