RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PLEKHG3A1L390 1219 aa20.42■□□□□ 0.86
PRPF39-204ENST00000553605 MARCH10Q8NA82 808 aaPredicted RBP20.42■□□□□ 0.86
PRPF39-204ENST00000553605 CEP350Q5VT06 3117 aa20.41■□□□□ 0.86
PRPF39-204ENST00000553605 ZBTB7CA1YPR0 619 aa20.41■□□□□ 0.86
PRPF39-204ENST00000553605 GPR162Q16538 588 aa20.41■□□□□ 0.86
PRPF39-204ENST00000553605 TOM1L2Q6ZVM7 507 aa20.41■□□□□ 0.86
PRPF39-204ENST00000553605 KDM2AQ9Y2K7 1162 aa20.41■□□□□ 0.86
PRPF39-204ENST00000553605 LRRC37A3O60309 1634 aa20.41■□□□□ 0.86
PRPF39-204ENST00000553605 BCL9O00512 1426 aa20.39■□□□□ 0.85
PRPF39-204ENST00000553605 MAP3K5Q99683 1374 aa20.38■□□□□ 0.85
PRPF39-204ENST00000553605 CDCA7Q9BWT1 371 aaPredicted RBP20.37■□□□□ 0.85
PRPF39-204ENST00000553605 AATKQ6ZMQ8 1374 aa20.36■□□□□ 0.85
PRPF39-204ENST00000553605 DCAF11Q8TEB1 546 aa20.36■□□□□ 0.85
PRPF39-204ENST00000553605 TOPAZ1Q8N9V7 1692 aa20.34■□□□□ 0.85
PRPF39-204ENST00000553605 ARHGEF28Q8N1W1 1705 aaKnown RBP20.33■□□□□ 0.84
PRPF39-204ENST00000553605 WDR17Q8IZU2 1322 aa20.32■□□□□ 0.84
PRPF39-204ENST00000553605 EXOC5O00471 708 aa20.31■□□□□ 0.84
PRPF39-204ENST00000553605 NLRP6P59044 892 aa20.31■□□□□ 0.84
PRPF39-204ENST00000553605 STAC3Q96MF2 364 aa20.31■□□□□ 0.84
PRPF39-204ENST00000553605 AXIN2Q9Y2T1 843 aa20.31■□□□□ 0.84
PRPF39-204ENST00000553605 AKAP12Q02952 1782 aa20.31■□□□□ 0.84
PRPF39-204ENST00000553605 PELP1Q8IZL8 1130 aaKnown RBP20.3■□□□□ 0.84
PRPF39-204ENST00000553605 KLHL34Q8N239 644 aa20.29■□□□□ 0.84
PRPF39-204ENST00000553605 GOLGB1Q14789 3259 aaKnown RBP20.28■□□□□ 0.84
PRPF39-204ENST00000553605 BRD4O60885 1362 aaPredicted RBP20.28■□□□□ 0.84
PRPF39-204ENST00000553605 CARD10Q9BWT7 1032 aa20.27■□□□□ 0.84
PRPF39-204ENST00000553605 WNK3Q9BYP7 1800 aa20.27■□□□□ 0.84
PRPF39-204ENST00000553605 PPIP5K1Q6PFW1 1433 aa20.27■□□□□ 0.83
PRPF39-204ENST00000553605 SRPK2P78362 688 aaKnown RBP20.26■□□□□ 0.83
PRPF39-204ENST00000553605 SHANK3Q9BYB0 1731 aa20.25■□□□□ 0.83
PRPF39-204ENST00000553605 CSB-PGBD3P0DP91 1061 aa20.25■□□□□ 0.83
PRPF39-204ENST00000553605 SLIT3O75094 1523 aa20.25■□□□□ 0.83
PRPF39-204ENST00000553605 COL18A1P39060 1754 aa20.25■□□□□ 0.83
PRPF39-204ENST00000553605 POLD1P28340 1107 aa20.24■□□□□ 0.83
PRPF39-204ENST00000553605 ZNF827Q17R98 1081 aa20.24■□□□□ 0.83
PRPF39-204ENST00000553605 SLC16A10Q8TF71 515 aa20.24■□□□□ 0.83
PRPF39-204ENST00000553605 ACSBG1Q96GR2 724 aa20.24■□□□□ 0.83
PRPF39-204ENST00000553605 ARHGEF25Q86VW2 580 aa20.22■□□□□ 0.83
PRPF39-204ENST00000553605 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
PRPF39-204ENST00000553605 PAPPAQ13219 1627 aa20.22■□□□□ 0.83
PRPF39-204ENST00000553605 USP6P35125 1406 aa20.2■□□□□ 0.82
PRPF39-204ENST00000553605 CPSF1Q10570 1443 aaKnown RBP20.2■□□□□ 0.82
PRPF39-204ENST00000553605 GRIN3BO60391 1043 aa20.2■□□□□ 0.82
PRPF39-204ENST00000553605 NLGN2Q8NFZ4 835 aa20.2■□□□□ 0.82
PRPF39-204ENST00000553605 LRRC4BQ9NT99 713 aa20.2■□□□□ 0.82
PRPF39-204ENST00000553605 CABP1Q9NZU7 370 aa20.2■□□□□ 0.82
PRPF39-204ENST00000553605 NHSQ6T4R5 1651 aa20.19■□□□□ 0.82
PRPF39-204ENST00000553605 CCDC7Q96M83 1385 aa20.19■□□□□ 0.82
PRPF39-204ENST00000553605 TNS2Q63HR2 1409 aa20.19■□□□□ 0.82
PRPF39-204ENST00000553605 KCNH5Q8NCM2 988 aa20.18■□□□□ 0.82
PRPF39-204ENST00000553605 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
PRPF39-204ENST00000553605 YBX3P16989 372 aaKnown RBP eCLIP20.17■□□□□ 0.82
PRPF39-204ENST00000553605 HSPA6P17066 643 aa20.17■□□□□ 0.82
PRPF39-204ENST00000553605 SOX12O15370 315 aa20.16■□□□□ 0.82
PRPF39-204ENST00000553605 RGPD5Q99666 1765 aa20.16■□□□□ 0.82
PRPF39-204ENST00000553605 ATP10DQ9P241 1426 aa20.14■□□□□ 0.81
PRPF39-204ENST00000553605 PNPLA7Q6ZV29 1317 aa20.14■□□□□ 0.81
PRPF39-204ENST00000553605 GPBP1L1Q9HC44 474 aaPredicted RBP20.14■□□□□ 0.81
PRPF39-204ENST00000553605 PIK3C2AO00443 1686 aa20.13■□□□□ 0.81
PRPF39-204ENST00000553605 TRPM1Q7Z4N2 1603 aa20.13■□□□□ 0.81
PRPF39-204ENST00000553605 CENPJQ9HC77 1338 aaPredicted RBP20.12■□□□□ 0.81
PRPF39-204ENST00000553605 BTAF1O14981 1849 aa20.12■□□□□ 0.81
PRPF39-204ENST00000553605 SLC27A3Q5K4L6 730 aa20.12■□□□□ 0.81
PRPF39-204ENST00000553605 TFCP2L1Q9NZI6 479 aa20.12■□□□□ 0.81
PRPF39-204ENST00000553605 COL24A1Q17RW2 1714 aa20.12■□□□□ 0.81
PRPF39-204ENST00000553605 NBPF1Q3BBV0 1214 aa20.11■□□□□ 0.81
PRPF39-204ENST00000553605 ABCC6O95255 1503 aa20.11■□□□□ 0.81
PRPF39-204ENST00000553605 IL2RBP14784 551 aa20.1■□□□□ 0.81
PRPF39-204ENST00000553605 TTC21BQ7Z4L5 1316 aa20.09■□□□□ 0.81
PRPF39-204ENST00000553605 QSER1Q2KHR3 1735 aa20.09■□□□□ 0.81
PRPF39-204ENST00000553605 ZNF692Q9BU19 519 aaPredicted RBP20.08■□□□□ 0.81
PRPF39-204ENST00000553605 NLRP2Q9NX02 1062 aa20.08■□□□□ 0.81
PRPF39-204ENST00000553605 RAB3GAP2Q9H2M9 1393 aa20.08■□□□□ 0.8
PRPF39-204ENST00000553605 ZNF526Q8TF50 670 aaPredicted RBP20.07■□□□□ 0.8
PRPF39-204ENST00000553605 KAT6BQ8WYB5 2073 aa20.07■□□□□ 0.8
PRPF39-204ENST00000553605 KCNQ4P56696 695 aa20.06■□□□□ 0.8
PRPF39-204ENST00000553605 KIAA1210Q9ULL0 1709 aa20.05■□□□□ 0.8
PRPF39-204ENST00000553605 QRICH2Q9H0J4 1663 aa20.05■□□□□ 0.8
PRPF39-204ENST00000553605 ERBB3P21860 1342 aa20.04■□□□□ 0.8
PRPF39-204ENST00000553605 TTC21AQ8NDW8 1320 aa20.04■□□□□ 0.8
PRPF39-204ENST00000553605 NFAT5O94916 1531 aa20.04■□□□□ 0.8
PRPF39-204ENST00000553605 MSH5O43196 834 aa20.03■□□□□ 0.8
PRPF39-204ENST00000553605 ADCY9O60503 1353 aa20.02■□□□□ 0.8
PRPF39-204ENST00000553605 DDX54Q8TDD1 881 aaKnown RBP20.01■□□□□ 0.79
PRPF39-204ENST00000553605 TUBGCP6Q96RT7 1819 aa20■□□□□ 0.79
PRPF39-204ENST00000553605 EVC2Q86UK5 1308 aa20■□□□□ 0.79
PRPF39-204ENST00000553605 COL23A1Q86Y22 540 aaPredicted RBP19.99■□□□□ 0.79
PRPF39-204ENST00000553605 SYTL4Q96C24 671 aaPredicted RBP19.99■□□□□ 0.79
PRPF39-204ENST00000553605 CD2APQ9Y5K6 639 aa19.99■□□□□ 0.79
PRPF39-204ENST00000553605 PRIM1P49642 420 aaKnown RBP19.98■□□□□ 0.79
PRPF39-204ENST00000553605 ANKRD24Q8TF21 1146 aa19.98■□□□□ 0.79
PRPF39-204ENST00000553605 MSL1Q68DK7 614 aa19.97■□□□□ 0.79
PRPF39-204ENST00000553605 KIF3CO14782 793 aa19.96■□□□□ 0.79
PRPF39-204ENST00000553605 APLP1P51693 650 aa19.96■□□□□ 0.79
PRPF39-204ENST00000553605 CCNL1Q9UK58 526 aaPredicted RBP19.96■□□□□ 0.79
PRPF39-204ENST00000553605 KTN1Q86UP2 1357 aaKnown RBP19.95■□□□□ 0.78
PRPF39-204ENST00000553605 DNAJC5GQ8N7S2 189 aa19.94■□□□□ 0.78
PRPF39-204ENST00000553605 ANKRD36BQ8N2N9 1353 aa19.94■□□□□ 0.78
PRPF39-204ENST00000553605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.92■□□□□ 0.78
PRPF39-204ENST00000553605 LY75O60449 1722 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 435.2 ms