RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 FAM43AQ8N2R8 423 aa6.68□□□□□ -1.34
TMEM55B-204ENST00000553602 FRAT1Q92837 279 aaPredicted RBP6.68□□□□□ -1.34
TMEM55B-204ENST00000553602 ISY1Q9ULR0 285 aaKnown RBP6.68□□□□□ -1.34
TMEM55B-204ENST00000553602 COG6Q9Y2V7 657 aa6.68□□□□□ -1.34
TMEM55B-204ENST00000553602 KIF16BQ96L93 1317 aa6.68□□□□□ -1.34
TMEM55B-204ENST00000553602 PREX1Q8TCU6 1659 aa6.68□□□□□ -1.34
TMEM55B-204ENST00000553602 CD109Q6YHK3 1445 aa6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 CD163L1Q9NR16 1453 aa6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 CD44P16070 742 aaKnown RBP6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 MTHFSP49914 203 aa6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 ZKSCAN2Q63HK3 967 aa6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 IL27Q8NEV9 243 aa6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 PANK1Q8TE04 598 aa6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 PNNQ9H307 717 aaKnown RBP6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 DDX19BQ9UMR2 479 aa6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 PHF8Q9UPP1 1060 aa6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 A0A1W2PP64 1363 aa6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 PIK3R4Q99570 1358 aa6.67□□□□□ -1.34
TMEM55B-204ENST00000553602 ARHGEF40Q8TER5 1519 aa6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 TULP1O00294 542 aaPredicted RBP6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 EIF5BO60841 1220 aaKnown RBP6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 FRAT2O75474 233 aaPredicted RBP6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 PPP1R37O75864 691 aa6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 RLBP1P12271 317 aa6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 ALDH1L2Q3SY69 923 aa6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 SMC5Q8IY18 1101 aa6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 DZIP1LQ8IYY4 767 aaKnown RBP6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 PLEKHF1Q96S99 279 aa6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 CHMP4BQ9H444 224 aaKnown RBP6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 SLC52A1Q9NWF4 448 aa6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 PCDHB15Q9Y5E8 787 aa6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 PTCH1Q13635 1447 aa6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 LRRC7Q96NW7 1537 aa6.66□□□□□ -1.34
TMEM55B-204ENST00000553602 ARHGEF1Q92888 912 aaKnown RBP6.65□□□□□ -1.34
TMEM55B-204ENST00000553602 SLC12A5Q9H2X9 1139 aa6.65□□□□□ -1.34
TMEM55B-204ENST00000553602 PDZRN3Q9UPQ7 1066 aa6.65□□□□□ -1.34
TMEM55B-204ENST00000553602 FAM135BQ49AJ0 1406 aa6.65□□□□□ -1.35
TMEM55B-204ENST00000553602 YTHDC2Q9H6S0 1430 aaKnown RBP6.65□□□□□ -1.35
TMEM55B-204ENST00000553602 YEATS2Q9ULM3 1422 aa6.65□□□□□ -1.35
TMEM55B-204ENST00000553602 CDK12Q9NYV4 1490 aaPredicted RBP6.65□□□□□ -1.35
TMEM55B-204ENST00000553602 AGLP35573 1532 aa6.65□□□□□ -1.35
TMEM55B-204ENST00000553602 FSD2A1L4K1 749 aa6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 IPO8O15397 1037 aaKnown RBP6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 PTMSP20962 102 aa6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 SLC4A3P48751 1232 aa6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 RBM25P49756 843 aaKnown RBP6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 ATF7IPQ6VMQ6 1270 aa6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 FTSJ3Q8IY81 847 aaKnown RBP6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 PHF12Q96QT6 1004 aa6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 TBC1D2Q9BYX2 928 aa6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 TERF2IPQ9NYB0 399 aa6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 TRAK1Q9UPV9 953 aa6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 KIF24Q5T7B8 1368 aa6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 SETD1AO15047 1707 aaKnown RBP6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 KNDC1Q76NI1 1749 aa6.64□□□□□ -1.35
TMEM55B-204ENST00000553602 SEC24BO95487 1268 aa6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 TRIM27P14373 513 aa6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 TMPOP42166 694 aaKnown RBP6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 EVX2Q03828 476 aa6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 CALD1Q05682 793 aaKnown RBP6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 E2F4Q16254 413 aa6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 NRKQ7Z2Y5 1582 aa6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 ARHGAP45Q92619 1136 aa6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 SNX21Q969T3 373 aa6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 CHMP5Q9NZZ3 219 aa6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 BRPF3Q9ULD4 1205 aa6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 ALKQ9UM73 1620 aa6.63□□□□□ -1.35
TMEM55B-204ENST00000553602 SPATA31D1Q6ZQQ2 1576 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 AATKQ6ZMQ8 1374 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 DDX11L8A8MPP1 907 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 FCHSD2O94868 740 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 U2AF1L5P0DN76 240 aaPredicted RBP6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 DDIT3P35638 169 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 U2AF1Q01081 240 aaKnown RBP eCLIP6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 NUCB1Q02818 461 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 LMOD2Q6P5Q4 547 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 TMEM106CQ9BVX2 250 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 RSPH6AQ9H0K4 717 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 SMC4Q9NTJ3 1288 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 ZBTB40Q9NUA8 1239 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 TRIM35Q9UPQ4 493 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 KIF13AQ9H1H9 1805 aa6.62□□□□□ -1.35
TMEM55B-204ENST00000553602 CPSF1Q10570 1443 aaKnown RBP6.61□□□□□ -1.35
TMEM55B-204ENST00000553602 EDC4Q6P2E9 1401 aaKnown RBP6.61□□□□□ -1.35
TMEM55B-204ENST00000553602 C19orf67A6NJJ6 358 aa6.61□□□□□ -1.35
TMEM55B-204ENST00000553602 MCM4P33991 863 aa6.61□□□□□ -1.35
TMEM55B-204ENST00000553602 BMP2KLQ5H9B9 411 aa6.61□□□□□ -1.35
TMEM55B-204ENST00000553602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.61□□□□□ -1.35
TMEM55B-204ENST00000553602 C22orf23Q9BZE7 217 aa6.61□□□□□ -1.35
TMEM55B-204ENST00000553602 MYO5BQ9ULV0 1848 aa6.61□□□□□ -1.35
TMEM55B-204ENST00000553602 MON2Q7Z3U7 1717 aa6.61□□□□□ -1.35
TMEM55B-204ENST00000553602 TECPR2O15040 1411 aa6.6□□□□□ -1.35
TMEM55B-204ENST00000553602 IBTKQ9P2D0 1353 aaPredicted RBP6.6□□□□□ -1.35
TMEM55B-204ENST00000553602 MKRN3Q13064 507 aaKnown RBP6.6□□□□□ -1.35
TMEM55B-204ENST00000553602 CLEC17AQ6ZS10 378 aa6.6□□□□□ -1.35
TMEM55B-204ENST00000553602 HDGFL2Q7Z4V5 671 aaPredicted RBP6.6□□□□□ -1.35
TMEM55B-204ENST00000553602 HSCBQ8IWL3 235 aa6.6□□□□□ -1.35
TMEM55B-204ENST00000553602 SSH1Q8WYL5 1049 aa6.6□□□□□ -1.35
TMEM55B-204ENST00000553602 GCC1Q96CN9 775 aa6.6□□□□□ -1.35
TMEM55B-204ENST00000553602 MS4A4AQ96JQ5 239 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms