RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 TTC21AQ8NDW8 1320 aa17.71■□□□□ 0.43
SIX1-202ENST00000553535 APBA3O96018 575 aa17.7■□□□□ 0.42
SIX1-202ENST00000553535 ARHGEF25Q86VW2 580 aa17.7■□□□□ 0.42
SIX1-202ENST00000553535 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
SIX1-202ENST00000553535 PARP4Q9UKK3 1724 aaKnown RBP17.7■□□□□ 0.42
SIX1-202ENST00000553535 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
SIX1-202ENST00000553535 KCNH5Q8NCM2 988 aa17.69■□□□□ 0.42
SIX1-202ENST00000553535 LRP5O75197 1615 aa17.68■□□□□ 0.42
SIX1-202ENST00000553535 KTN1Q86UP2 1357 aaKnown RBP17.68■□□□□ 0.42
SIX1-202ENST00000553535 R3HDM1Q15032 1099 aaKnown RBP17.67■□□□□ 0.42
SIX1-202ENST00000553535 PARD3Q8TEW0 1356 aa17.67■□□□□ 0.42
SIX1-202ENST00000553535 TOM1L2Q6ZVM7 507 aa17.66■□□□□ 0.42
SIX1-202ENST00000553535 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
SIX1-202ENST00000553535 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
SIX1-202ENST00000553535 C11orf95C9JLR9 678 aaPredicted RBP17.66■□□□□ 0.42
SIX1-202ENST00000553535 MON2Q7Z3U7 1717 aa17.65■□□□□ 0.42
SIX1-202ENST00000553535 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
SIX1-202ENST00000553535 SOX12O15370 315 aa17.64■□□□□ 0.41
SIX1-202ENST00000553535 CD163L1Q9NR16 1453 aa17.63■□□□□ 0.41
SIX1-202ENST00000553535 PEAK1Q9H792 1746 aa17.63■□□□□ 0.41
SIX1-202ENST00000553535 USP31Q70CQ4 1352 aa17.63■□□□□ 0.41
SIX1-202ENST00000553535 DDB1Q16531 1140 aa17.63■□□□□ 0.41
SIX1-202ENST00000553535 NFAT5O94916 1531 aa17.63■□□□□ 0.41
SIX1-202ENST00000553535 RREB1Q92766 1687 aa17.62■□□□□ 0.41
SIX1-202ENST00000553535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.62■□□□□ 0.41
SIX1-202ENST00000553535 CARD10Q9BWT7 1032 aa17.62■□□□□ 0.41
SIX1-202ENST00000553535 SLC12A5Q9H2X9 1139 aa17.62■□□□□ 0.41
SIX1-202ENST00000553535 SBF2Q86WG5 1849 aa17.62■□□□□ 0.41
SIX1-202ENST00000553535 PUS7Q96PZ0 661 aaKnown RBP17.62■□□□□ 0.41
SIX1-202ENST00000553535 CDCA7Q9BWT1 371 aaPredicted RBP17.62■□□□□ 0.41
SIX1-202ENST00000553535 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
SIX1-202ENST00000553535 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
SIX1-202ENST00000553535 OVOS2A0A0J9YW53 1432 aa17.61■□□□□ 0.41
SIX1-202ENST00000553535 OVOS2Q6IE36 1432 aa17.61■□□□□ 0.41
SIX1-202ENST00000553535 TMC1Q8TDI8 760 aa17.61■□□□□ 0.41
SIX1-202ENST00000553535 WNK3Q9BYP7 1800 aa17.6■□□□□ 0.41
SIX1-202ENST00000553535 NME9Q86XW9 330 aa17.6■□□□□ 0.41
SIX1-202ENST00000553535 USP54Q70EL1 1684 aa17.59■□□□□ 0.41
SIX1-202ENST00000553535 NUP188Q5SRE5 1749 aa17.59■□□□□ 0.41
SIX1-202ENST00000553535 CSB-PGBD3P0DP91 1061 aa17.59■□□□□ 0.41
SIX1-202ENST00000553535 HDGFL2Q7Z4V5 671 aaPredicted RBP17.59■□□□□ 0.41
SIX1-202ENST00000553535 MARCH10Q8NA82 808 aaPredicted RBP17.59■□□□□ 0.41
SIX1-202ENST00000553535 ABCC6O95255 1503 aa17.58■□□□□ 0.4
SIX1-202ENST00000553535 PLSCR1O15162 318 aa17.57■□□□□ 0.4
SIX1-202ENST00000553535 NBPF14Q5TI25 921 aa17.57■□□□□ 0.4
SIX1-202ENST00000553535 TESK2Q96S53 571 aa17.57■□□□□ 0.4
SIX1-202ENST00000553535 PTF1AQ7RTS3 328 aa17.57■□□□□ 0.4
SIX1-202ENST00000553535 BCL11BQ9C0K0 894 aaPredicted RBP17.57■□□□□ 0.4
SIX1-202ENST00000553535 TERF2IPQ9NYB0 399 aa17.57■□□□□ 0.4
SIX1-202ENST00000553535 BCL9O00512 1426 aa17.56■□□□□ 0.4
SIX1-202ENST00000553535 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
SIX1-202ENST00000553535 EDC4Q6P2E9 1401 aaKnown RBP17.56■□□□□ 0.4
SIX1-202ENST00000553535 ST20-MTHFSA0A0A6YYL1 179 aa17.55■□□□□ 0.4
SIX1-202ENST00000553535 EXOC5O00471 708 aa17.55■□□□□ 0.4
SIX1-202ENST00000553535 TRIM26Q12899 539 aaPredicted RBP17.55■□□□□ 0.4
SIX1-202ENST00000553535 A0A1W2PP64 1363 aa17.55■□□□□ 0.4
SIX1-202ENST00000553535 ERBB3P21860 1342 aa17.53■□□□□ 0.4
SIX1-202ENST00000553535 RGPD3A6NKT7 1758 aaPredicted RBP17.53■□□□□ 0.4
SIX1-202ENST00000553535 LTN1O94822 1766 aa17.53■□□□□ 0.4
SIX1-202ENST00000553535 RGPD4Q7Z3J3 1758 aa17.53■□□□□ 0.4
SIX1-202ENST00000553535 SLC24A1O60721 1099 aa17.53■□□□□ 0.4
SIX1-202ENST00000553535 PROM2Q8N271 834 aa17.52■□□□□ 0.39
SIX1-202ENST00000553535 NLRP2Q9NX02 1062 aa17.51■□□□□ 0.39
SIX1-202ENST00000553535 NINLQ9Y2I6 1382 aa17.51■□□□□ 0.39
SIX1-202ENST00000553535 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
SIX1-202ENST00000553535 IP6K1Q92551 441 aa17.49■□□□□ 0.39
SIX1-202ENST00000553535 TNS2Q63HR2 1409 aa17.48■□□□□ 0.39
SIX1-202ENST00000553535 IL2RBP14784 551 aa17.48■□□□□ 0.39
SIX1-202ENST00000553535 KCNQ2O43526 872 aa17.47■□□□□ 0.39
SIX1-202ENST00000553535 ANO8Q9HCE9 1232 aaPredicted RBP17.47■□□□□ 0.39
SIX1-202ENST00000553535 KAT6BQ8WYB5 2073 aa17.46■□□□□ 0.39
SIX1-202ENST00000553535 SPON1Q9HCB6 807 aa17.46■□□□□ 0.39
SIX1-202ENST00000553535 TXNRD1Q16881 649 aa17.45■□□□□ 0.38
SIX1-202ENST00000553535 COG3Q96JB2 828 aa17.45■□□□□ 0.38
SIX1-202ENST00000553535 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
SIX1-202ENST00000553535 FBLN1P23142 703 aa17.44■□□□□ 0.38
SIX1-202ENST00000553535 TMF1P82094 1093 aa17.43■□□□□ 0.38
SIX1-202ENST00000553535 ACSBG1Q96GR2 724 aa17.43■□□□□ 0.38
SIX1-202ENST00000553535 MAP3K19Q56UN5 1328 aa17.43■□□□□ 0.38
SIX1-202ENST00000553535 USP47Q96K76 1375 aa17.42■□□□□ 0.38
SIX1-202ENST00000553535 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
SIX1-202ENST00000553535 HOXC9P31274 260 aa17.41■□□□□ 0.38
SIX1-202ENST00000553535 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
SIX1-202ENST00000553535 PDGFDQ9GZP0 370 aaPredicted RBP17.41■□□□□ 0.38
SIX1-202ENST00000553535 CASZ1Q86V15 1759 aa17.41■□□□□ 0.38
SIX1-202ENST00000553535 FYB1O15117 783 aa17.4■□□□□ 0.38
SIX1-202ENST00000553535 AMPHP49418 695 aa17.4■□□□□ 0.38
SIX1-202ENST00000553535 SLC15A2Q16348 729 aa17.4■□□□□ 0.38
SIX1-202ENST00000553535 FAM208AQ9UK61 1670 aaKnown RBP17.4■□□□□ 0.38
SIX1-202ENST00000553535 DSG3P32926 999 aa17.39■□□□□ 0.37
SIX1-202ENST00000553535 STK32BQ9NY57 414 aa17.39■□□□□ 0.37
SIX1-202ENST00000553535 PPP1R1BQ9UD71 204 aaPredicted RBP17.39■□□□□ 0.37
SIX1-202ENST00000553535 TIMELESSQ9UNS1 1208 aa17.38■□□□□ 0.37
SIX1-202ENST00000553535 RGPD2P0DJD1 1756 aa17.37■□□□□ 0.37
SIX1-202ENST00000553535 BTAF1O14981 1849 aa17.37■□□□□ 0.37
SIX1-202ENST00000553535 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
SIX1-202ENST00000553535 CAPN15O75808 1086 aa17.36■□□□□ 0.37
SIX1-202ENST00000553535 CDCA8Q53HL2 280 aa17.36■□□□□ 0.37
SIX1-202ENST00000553535 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
SIX1-202ENST00000553535 RRS1Q15050 365 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms