RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 ANKRD36BQ8N2N9 1353 aa18.37■□□□□ 0.53
HNRNPC-205ENST00000553300 COL18A1P39060 1754 aa18.36■□□□□ 0.53
HNRNPC-205ENST00000553300 SOX12O15370 315 aa18.36■□□□□ 0.53
HNRNPC-205ENST00000553300 NFAT5O94916 1531 aa18.36■□□□□ 0.53
HNRNPC-205ENST00000553300 ABCC6O95255 1503 aa18.36■□□□□ 0.53
HNRNPC-205ENST00000553300 WDR17Q8IZU2 1322 aa18.35■□□□□ 0.53
HNRNPC-205ENST00000553300 TOM1L2Q6ZVM7 507 aa18.35■□□□□ 0.53
HNRNPC-205ENST00000553300 AXIN2Q9Y2T1 843 aa18.35■□□□□ 0.53
HNRNPC-205ENST00000553300 PDE3BQ13370 1112 aa18.34■□□□□ 0.53
HNRNPC-205ENST00000553300 ZRANB1Q9UGI0 708 aa18.34■□□□□ 0.53
HNRNPC-205ENST00000553300 FAM196AQ6ZSG2 479 aa18.33■□□□□ 0.53
HNRNPC-205ENST00000553300 C11orf95C9JLR9 678 aaPredicted RBP18.32■□□□□ 0.52
HNRNPC-205ENST00000553300 CDCA7Q9BWT1 371 aaPredicted RBP18.32■□□□□ 0.52
HNRNPC-205ENST00000553300 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
HNRNPC-205ENST00000553300 COG3Q96JB2 828 aa18.31■□□□□ 0.52
HNRNPC-205ENST00000553300 OVOS2A0A0J9YW53 1432 aa18.31■□□□□ 0.52
HNRNPC-205ENST00000553300 OVOS2Q6IE36 1432 aa18.31■□□□□ 0.52
HNRNPC-205ENST00000553300 BAG6P46379 1132 aa18.3■□□□□ 0.52
HNRNPC-205ENST00000553300 EIF4G2P78344 907 aaKnown RBP eCLIP18.3■□□□□ 0.52
HNRNPC-205ENST00000553300 CARD10Q9BWT7 1032 aa18.3■□□□□ 0.52
HNRNPC-205ENST00000553300 FAM182BQ5T319 152 aa18.29■□□□□ 0.52
HNRNPC-205ENST00000553300 RGPD5Q99666 1765 aa18.28■□□□□ 0.52
HNRNPC-205ENST00000553300 PARP4Q9UKK3 1724 aaKnown RBP18.28■□□□□ 0.52
HNRNPC-205ENST00000553300 RGPD1P0DJD0 1748 aa18.27■□□□□ 0.52
HNRNPC-205ENST00000553300 CCDC7Q96M83 1385 aa18.27■□□□□ 0.52
HNRNPC-205ENST00000553300 DDB1Q16531 1140 aa18.27■□□□□ 0.51
HNRNPC-205ENST00000553300 DEFB132Q7Z7B7 95 aa18.27■□□□□ 0.51
HNRNPC-205ENST00000553300 LTN1O94822 1766 aa18.26■□□□□ 0.51
HNRNPC-205ENST00000553300 FYB1O15117 783 aa18.26■□□□□ 0.51
HNRNPC-205ENST00000553300 ERBB3P21860 1342 aa18.26■□□□□ 0.51
HNRNPC-205ENST00000553300 IP6K1Q92551 441 aa18.25■□□□□ 0.51
HNRNPC-205ENST00000553300 DISP2A7MBM2 1401 aa18.24■□□□□ 0.51
HNRNPC-205ENST00000553300 TRIM37O94972 964 aa18.23■□□□□ 0.51
HNRNPC-205ENST00000553300 HSPA5P11021 654 aaKnown RBP18.23■□□□□ 0.51
HNRNPC-205ENST00000553300 ANKRD24Q8TF21 1146 aa18.23■□□□□ 0.51
HNRNPC-205ENST00000553300 NLRP2Q9NX02 1062 aa18.23■□□□□ 0.51
HNRNPC-205ENST00000553300 EXOC5O00471 708 aa18.22■□□□□ 0.51
HNRNPC-205ENST00000553300 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
HNRNPC-205ENST00000553300 OVOS2A0A0G2JMS6 1433 aa18.21■□□□□ 0.51
HNRNPC-205ENST00000553300 WNK3Q9BYP7 1800 aa18.2■□□□□ 0.5
HNRNPC-205ENST00000553300 MYOM1P52179 1685 aa18.2■□□□□ 0.5
HNRNPC-205ENST00000553300 MAP3K19Q56UN5 1328 aa18.2■□□□□ 0.5
HNRNPC-205ENST00000553300 AMPHP49418 695 aa18.2■□□□□ 0.5
HNRNPC-205ENST00000553300 CARD14Q9BXL6 1004 aa18.2■□□□□ 0.5
HNRNPC-205ENST00000553300 LRRC37A3O60309 1634 aa18.2■□□□□ 0.5
HNRNPC-205ENST00000553300 PARD3Q8TEW0 1356 aa18.19■□□□□ 0.5
HNRNPC-205ENST00000553300 EN1Q05925 392 aaPredicted RBP18.19■□□□□ 0.5
HNRNPC-205ENST00000553300 RTL1A6NKG5 1358 aa18.19■□□□□ 0.5
HNRNPC-205ENST00000553300 APBA3O96018 575 aa18.18■□□□□ 0.5
HNRNPC-205ENST00000553300 HOXC9P31274 260 aa18.18■□□□□ 0.5
HNRNPC-205ENST00000553300 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
HNRNPC-205ENST00000553300 TNS1Q9HBL0 1735 aaKnown RBP18.18■□□□□ 0.5
HNRNPC-205ENST00000553300 BCL9O00512 1426 aa18.18■□□□□ 0.5
HNRNPC-205ENST00000553300 NSD3Q9BZ95 1437 aa18.18■□□□□ 0.5
HNRNPC-205ENST00000553300 KIF20BQ96Q89 1820 aa18.18■□□□□ 0.5
HNRNPC-205ENST00000553300 CGNL1Q0VF96 1302 aa18.18■□□□□ 0.5
HNRNPC-205ENST00000553300 IL2RBP14784 551 aa18.17■□□□□ 0.5
HNRNPC-205ENST00000553300 SRCAPQ6ZRS2 3230 aa18.17■□□□□ 0.5
HNRNPC-205ENST00000553300 KIF24Q5T7B8 1368 aa18.17■□□□□ 0.5
HNRNPC-205ENST00000553300 FAM208AQ9UK61 1670 aaKnown RBP18.17■□□□□ 0.5
HNRNPC-205ENST00000553300 CAMKK2Q96RR4 588 aa18.17■□□□□ 0.5
HNRNPC-205ENST00000553300 MARCH10Q8NA82 808 aaPredicted RBP18.16■□□□□ 0.5
HNRNPC-205ENST00000553300 PEAK1Q9H792 1746 aa18.16■□□□□ 0.5
HNRNPC-205ENST00000553300 FBLN1P23142 703 aa18.15■□□□□ 0.5
HNRNPC-205ENST00000553300 RRS1Q15050 365 aaKnown RBP18.15■□□□□ 0.5
HNRNPC-205ENST00000553300 LTV1Q96GA3 475 aaPredicted RBP18.15■□□□□ 0.5
HNRNPC-205ENST00000553300 EZH2Q15910 746 aaKnown RBP18.14■□□□□ 0.49
HNRNPC-205ENST00000553300 BCL11BQ9C0K0 894 aaPredicted RBP18.14■□□□□ 0.49
HNRNPC-205ENST00000553300 TNS2Q63HR2 1409 aa18.14■□□□□ 0.49
HNRNPC-205ENST00000553300 SMG6Q86US8 1419 aaKnown RBP18.13■□□□□ 0.49
HNRNPC-205ENST00000553300 SBF2Q86WG5 1849 aa18.12■□□□□ 0.49
HNRNPC-205ENST00000553300 PLSCR1O15162 318 aa18.12■□□□□ 0.49
HNRNPC-205ENST00000553300 FLT4P35916 1363 aa18.12■□□□□ 0.49
HNRNPC-205ENST00000553300 PANK3Q9H999 370 aa18.11■□□□□ 0.49
HNRNPC-205ENST00000553300 INSRP06213 1382 aa18.11■□□□□ 0.49
HNRNPC-205ENST00000553300 HSP90AB2PQ58FF8 381 aa18.08■□□□□ 0.49
HNRNPC-205ENST00000553300 NBPF14Q5TI25 921 aa18.07■□□□□ 0.48
HNRNPC-205ENST00000553300 NSD2O96028 1365 aa18.07■□□□□ 0.48
HNRNPC-205ENST00000553300 NBPF6Q5VWK0 638 aa18.06■□□□□ 0.48
HNRNPC-205ENST00000553300 NBPF4Q96M43 638 aa18.06■□□□□ 0.48
HNRNPC-205ENST00000553300 RGPD3A6NKT7 1758 aaPredicted RBP18.06■□□□□ 0.48
HNRNPC-205ENST00000553300 RGPD4Q7Z3J3 1758 aa18.06■□□□□ 0.48
HNRNPC-205ENST00000553300 EMILIN1Q9Y6C2 1016 aa18.05■□□□□ 0.48
HNRNPC-205ENST00000553300 WASHC2AQ641Q2 1341 aa18.05■□□□□ 0.48
HNRNPC-205ENST00000553300 RREB1Q92766 1687 aa18.05■□□□□ 0.48
HNRNPC-205ENST00000553300 ZCRB1Q8TBF4 217 aaKnown RBP18.04■□□□□ 0.48
HNRNPC-205ENST00000553300 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
HNRNPC-205ENST00000553300 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
HNRNPC-205ENST00000553300 MAP2P11137 1827 aaKnown RBP18.04■□□□□ 0.48
HNRNPC-205ENST00000553300 PSDA5PKW4 1024 aaPredicted RBP18.04■□□□□ 0.48
HNRNPC-205ENST00000553300 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
HNRNPC-205ENST00000553300 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
HNRNPC-205ENST00000553300 KAT6BQ8WYB5 2073 aa18.03■□□□□ 0.48
HNRNPC-205ENST00000553300 ANKRD26Q9UPS8 1709 aa18.03■□□□□ 0.48
HNRNPC-205ENST00000553300 RGPD2P0DJD1 1756 aa18.03■□□□□ 0.48
HNRNPC-205ENST00000553300 DDX54Q8TDD1 881 aaKnown RBP18.03■□□□□ 0.48
HNRNPC-205ENST00000553300 POLKQ9UBT6 870 aa18.03■□□□□ 0.48
HNRNPC-205ENST00000553300 KIF7Q2M1P5 1343 aa18.02■□□□□ 0.48
HNRNPC-205ENST00000553300 TATP17735 454 aaPredicted RBP18.02■□□□□ 0.47
HNRNPC-205ENST00000553300 PTF1AQ7RTS3 328 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms