RNA–Protein interactions for RNA: ENST00000553297.1

NID2-202, Transcript of nidogen 2, humanhuman

TSL 2

Gene NID2, Length 798 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID2-202ENST00000553297 HDGFL2Q7Z4V5 671 aaPredicted RBP13.18□□□□□ -0.3
NID2-202ENST00000553297 TNS1Q9HBL0 1735 aaKnown RBP13.18□□□□□ -0.3
NID2-202ENST00000553297 AATKQ6ZMQ8 1374 aa13.18□□□□□ -0.3
NID2-202ENST00000553297 TTC21BQ7Z4L5 1316 aa13.17□□□□□ -0.3
NID2-202ENST00000553297 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
NID2-202ENST00000553297 TRIM37O94972 964 aa13.17□□□□□ -0.3
NID2-202ENST00000553297 SBNO2Q9Y2G9 1366 aa13.17□□□□□ -0.3
NID2-202ENST00000553297 MON2Q7Z3U7 1717 aa13.16□□□□□ -0.3
NID2-202ENST00000553297 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
NID2-202ENST00000553297 APBA3O96018 575 aa13.16□□□□□ -0.3
NID2-202ENST00000553297 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
NID2-202ENST00000553297 CPSF1Q10570 1443 aaKnown RBP13.15□□□□□ -0.3
NID2-202ENST00000553297 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.3
NID2-202ENST00000553297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.15□□□□□ -0.3
NID2-202ENST00000553297 TERF2IPQ9NYB0 399 aa13.15□□□□□ -0.3
NID2-202ENST00000553297 PARD3Q8TEW0 1356 aa13.15□□□□□ -0.3
NID2-202ENST00000553297 DISP2A7MBM2 1401 aa13.14□□□□□ -0.31
NID2-202ENST00000553297 DDB1Q16531 1140 aa13.14□□□□□ -0.31
NID2-202ENST00000553297 CDCA7Q9BWT1 371 aaPredicted RBP13.14□□□□□ -0.31
NID2-202ENST00000553297 RGPD5Q99666 1765 aa13.14□□□□□ -0.31
NID2-202ENST00000553297 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
NID2-202ENST00000553297 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
NID2-202ENST00000553297 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
NID2-202ENST00000553297 NBPF14Q5TI25 921 aa13.13□□□□□ -0.31
NID2-202ENST00000553297 LRP5O75197 1615 aa13.13□□□□□ -0.31
NID2-202ENST00000553297 OVOS2A0A0G2JMS6 1433 aa13.13□□□□□ -0.31
NID2-202ENST00000553297 OVOS2A0A0J9YW53 1432 aa13.13□□□□□ -0.31
NID2-202ENST00000553297 OVOS2Q6IE36 1432 aa13.13□□□□□ -0.31
NID2-202ENST00000553297 COL18A1P39060 1754 aa13.12□□□□□ -0.31
NID2-202ENST00000553297 LRRC37A3O60309 1634 aa13.11□□□□□ -0.31
NID2-202ENST00000553297 R3HDM1Q15032 1099 aaKnown RBP13.11□□□□□ -0.31
NID2-202ENST00000553297 ARHGEF25Q86VW2 580 aa13.11□□□□□ -0.31
NID2-202ENST00000553297 ABCC6O95255 1503 aa13.11□□□□□ -0.31
NID2-202ENST00000553297 LTN1O94822 1766 aa13.11□□□□□ -0.31
NID2-202ENST00000553297 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
NID2-202ENST00000553297 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
NID2-202ENST00000553297 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
NID2-202ENST00000553297 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
NID2-202ENST00000553297 CAMKK2Q96RR4 588 aa13.09□□□□□ -0.31
NID2-202ENST00000553297 CARD10Q9BWT7 1032 aa13.09□□□□□ -0.31
NID2-202ENST00000553297 USP54Q70EL1 1684 aa13.08□□□□□ -0.31
NID2-202ENST00000553297 RREB1Q92766 1687 aa13.08□□□□□ -0.31
NID2-202ENST00000553297 NFAT5O94916 1531 aa13.08□□□□□ -0.31
NID2-202ENST00000553297 EXOC5O00471 708 aa13.08□□□□□ -0.32
NID2-202ENST00000553297 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
NID2-202ENST00000553297 SBF2Q86WG5 1849 aa13.07□□□□□ -0.32
NID2-202ENST00000553297 NME9Q86XW9 330 aa13.07□□□□□ -0.32
NID2-202ENST00000553297 SLC12A5Q9H2X9 1139 aa13.07□□□□□ -0.32
NID2-202ENST00000553297 NLRP2Q9NX02 1062 aa13.07□□□□□ -0.32
NID2-202ENST00000553297 NUP188Q5SRE5 1749 aa13.07□□□□□ -0.32
NID2-202ENST00000553297 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
NID2-202ENST00000553297 ST20-MTHFSA0A0A6YYL1 179 aa13.06□□□□□ -0.32
NID2-202ENST00000553297 TMF1P82094 1093 aa13.06□□□□□ -0.32
NID2-202ENST00000553297 RGPD3A6NKT7 1758 aaPredicted RBP13.06□□□□□ -0.32
NID2-202ENST00000553297 RGPD4Q7Z3J3 1758 aa13.06□□□□□ -0.32
NID2-202ENST00000553297 A0A1W2PP64 1363 aa13.06□□□□□ -0.32
NID2-202ENST00000553297 MYCNP04198 464 aaPredicted RBP13.05□□□□□ -0.32
NID2-202ENST00000553297 CDCA8Q53HL2 280 aa13.05□□□□□ -0.32
NID2-202ENST00000553297 COG3Q96JB2 828 aa13.05□□□□□ -0.32
NID2-202ENST00000553297 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
NID2-202ENST00000553297 PEAK1Q9H792 1746 aa13.05□□□□□ -0.32
NID2-202ENST00000553297 CD163L1Q9NR16 1453 aa13.04□□□□□ -0.32
NID2-202ENST00000553297 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
NID2-202ENST00000553297 ANKRD24Q8TF21 1146 aa13.03□□□□□ -0.32
NID2-202ENST00000553297 ERBB3P21860 1342 aa13.03□□□□□ -0.32
NID2-202ENST00000553297 PLSCR1O15162 318 aa13.02□□□□□ -0.33
NID2-202ENST00000553297 IL2RBP14784 551 aa13.02□□□□□ -0.33
NID2-202ENST00000553297 PPP1R1BQ9UD71 204 aaPredicted RBP13.02□□□□□ -0.33
NID2-202ENST00000553297 USP47Q96K76 1375 aa13.02□□□□□ -0.33
NID2-202ENST00000553297 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
NID2-202ENST00000553297 AMPHP49418 695 aa13.01□□□□□ -0.33
NID2-202ENST00000553297 MARCH10Q8NA82 808 aaPredicted RBP13.01□□□□□ -0.33
NID2-202ENST00000553297 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
NID2-202ENST00000553297 ANKRD36BQ8N2N9 1353 aa13.01□□□□□ -0.33
NID2-202ENST00000553297 KAT6BQ8WYB5 2073 aa13□□□□□ -0.33
NID2-202ENST00000553297 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
NID2-202ENST00000553297 TESK2Q96S53 571 aa13□□□□□ -0.33
NID2-202ENST00000553297 PCGF6Q9BYE7 350 aa13□□□□□ -0.33
NID2-202ENST00000553297 BCL9O00512 1426 aa12.99□□□□□ -0.33
NID2-202ENST00000553297 SMG6Q86US8 1419 aaKnown RBP12.99□□□□□ -0.33
NID2-202ENST00000553297 SPON1Q9HCB6 807 aa12.99□□□□□ -0.33
NID2-202ENST00000553297 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
NID2-202ENST00000553297 KIF20BQ96Q89 1820 aa12.99□□□□□ -0.33
NID2-202ENST00000553297 IP6K1Q92551 441 aa12.98□□□□□ -0.33
NID2-202ENST00000553297 STK32BQ9NY57 414 aa12.98□□□□□ -0.33
NID2-202ENST00000553297 NHSQ6T4R5 1651 aa12.98□□□□□ -0.33
NID2-202ENST00000553297 CLSPNQ9HAW4 1339 aa12.97□□□□□ -0.33
NID2-202ENST00000553297 KCNQ2O43526 872 aa12.96□□□□□ -0.33
NID2-202ENST00000553297 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.33
NID2-202ENST00000553297 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
NID2-202ENST00000553297 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
NID2-202ENST00000553297 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
NID2-202ENST00000553297 MAP3K19Q56UN5 1328 aa12.94□□□□□ -0.34
NID2-202ENST00000553297 HOXC9P31274 260 aa12.94□□□□□ -0.34
NID2-202ENST00000553297 TXNRD1Q16881 649 aa12.94□□□□□ -0.34
NID2-202ENST00000553297 POLR3GLQ9BT43 218 aa12.94□□□□□ -0.34
NID2-202ENST00000553297 GGNBP2Q9H3C7 697 aa12.94□□□□□ -0.34
NID2-202ENST00000553297 BTAF1O14981 1849 aa12.94□□□□□ -0.34
NID2-202ENST00000553297 SYTL4Q96C24 671 aaPredicted RBP12.93□□□□□ -0.34
NID2-202ENST00000553297 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms