RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 NFAT5O94916 1531 aa18.17■□□□□ 0.5
ACTN1-207ENST00000553290 ZRANB1Q9UGI0 708 aa18.16■□□□□ 0.5
ACTN1-207ENST00000553290 AXIN2Q9Y2T1 843 aa18.16■□□□□ 0.5
ACTN1-207ENST00000553290 PDE3BQ13370 1112 aa18.15■□□□□ 0.5
ACTN1-207ENST00000553290 CDCA8Q53HL2 280 aa18.15■□□□□ 0.5
ACTN1-207ENST00000553290 FAM182BQ5T319 152 aa18.15■□□□□ 0.5
ACTN1-207ENST00000553290 TOM1L2Q6ZVM7 507 aa18.15■□□□□ 0.5
ACTN1-207ENST00000553290 CCER1Q8TC90 406 aaPredicted RBP18.15■□□□□ 0.5
ACTN1-207ENST00000553290 WDR17Q8IZU2 1322 aa18.15■□□□□ 0.5
ACTN1-207ENST00000553290 ABCC6O95255 1503 aa18.14■□□□□ 0.49
ACTN1-207ENST00000553290 BAG6P46379 1132 aa18.14■□□□□ 0.49
ACTN1-207ENST00000553290 FAM196AQ6ZSG2 479 aa18.14■□□□□ 0.49
ACTN1-207ENST00000553290 DEFB132Q7Z7B7 95 aa18.14■□□□□ 0.49
ACTN1-207ENST00000553290 RGPD1P0DJD0 1748 aa18.13■□□□□ 0.49
ACTN1-207ENST00000553290 RGPD5Q99666 1765 aa18.13■□□□□ 0.49
ACTN1-207ENST00000553290 PARP4Q9UKK3 1724 aaKnown RBP18.12■□□□□ 0.49
ACTN1-207ENST00000553290 ANKRD36BQ8N2N9 1353 aa18.12■□□□□ 0.49
ACTN1-207ENST00000553290 CSB-PGBD3P0DP91 1061 aa18.11■□□□□ 0.49
ACTN1-207ENST00000553290 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
ACTN1-207ENST00000553290 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
ACTN1-207ENST00000553290 C11orf95C9JLR9 678 aaPredicted RBP18.1■□□□□ 0.49
ACTN1-207ENST00000553290 CDCA7Q9BWT1 371 aaPredicted RBP18.09■□□□□ 0.49
ACTN1-207ENST00000553290 CARD10Q9BWT7 1032 aa18.09■□□□□ 0.49
ACTN1-207ENST00000553290 LTN1O94822 1766 aa18.09■□□□□ 0.49
ACTN1-207ENST00000553290 COG3Q96JB2 828 aa18.08■□□□□ 0.48
ACTN1-207ENST00000553290 DISP2A7MBM2 1401 aa18.07■□□□□ 0.48
ACTN1-207ENST00000553290 TRIM37O94972 964 aa18.07■□□□□ 0.48
ACTN1-207ENST00000553290 DDB1Q16531 1140 aa18.07■□□□□ 0.48
ACTN1-207ENST00000553290 WNK3Q9BYP7 1800 aa18.07■□□□□ 0.48
ACTN1-207ENST00000553290 TNS1Q9HBL0 1735 aaKnown RBP18.06■□□□□ 0.48
ACTN1-207ENST00000553290 CCDC7Q96M83 1385 aa18.06■□□□□ 0.48
ACTN1-207ENST00000553290 ERBB3P21860 1342 aa18.05■□□□□ 0.48
ACTN1-207ENST00000553290 EN1Q05925 392 aaPredicted RBP18.05■□□□□ 0.48
ACTN1-207ENST00000553290 LRRC37A3O60309 1634 aa18.05■□□□□ 0.48
ACTN1-207ENST00000553290 OVOS2A0A0G2JMS6 1433 aa18.04■□□□□ 0.48
ACTN1-207ENST00000553290 FYB1O15117 783 aa18.02■□□□□ 0.48
ACTN1-207ENST00000553290 APBA3O96018 575 aa18.02■□□□□ 0.48
ACTN1-207ENST00000553290 EIF4G2P78344 907 aaKnown RBP eCLIP18.02■□□□□ 0.48
ACTN1-207ENST00000553290 ANKRD24Q8TF21 1146 aa18.02■□□□□ 0.48
ACTN1-207ENST00000553290 IP6K1Q92551 441 aa18.02■□□□□ 0.48
ACTN1-207ENST00000553290 NLRP2Q9NX02 1062 aa18.02■□□□□ 0.48
ACTN1-207ENST00000553290 EXOC5O00471 708 aa18.01■□□□□ 0.47
ACTN1-207ENST00000553290 MYOM1P52179 1685 aa18.01■□□□□ 0.47
ACTN1-207ENST00000553290 PARD3Q8TEW0 1356 aa18.01■□□□□ 0.47
ACTN1-207ENST00000553290 PEAK1Q9H792 1746 aa18.01■□□□□ 0.47
ACTN1-207ENST00000553290 CAMKK2Q96RR4 588 aa18■□□□□ 0.47
ACTN1-207ENST00000553290 EZH2Q15910 746 aaKnown RBP17.99■□□□□ 0.47
ACTN1-207ENST00000553290 GGNBP2Q9H3C7 697 aa17.99■□□□□ 0.47
ACTN1-207ENST00000553290 SRCAPQ6ZRS2 3230 aa17.99■□□□□ 0.47
ACTN1-207ENST00000553290 MAP3K19Q56UN5 1328 aa17.98■□□□□ 0.47
ACTN1-207ENST00000553290 AMPHP49418 695 aa17.98■□□□□ 0.47
ACTN1-207ENST00000553290 MARCH10Q8NA82 808 aaPredicted RBP17.98■□□□□ 0.47
ACTN1-207ENST00000553290 SBF2Q86WG5 1849 aa17.98■□□□□ 0.47
ACTN1-207ENST00000553290 KIF20BQ96Q89 1820 aa17.98■□□□□ 0.47
ACTN1-207ENST00000553290 BCL9O00512 1426 aa17.98■□□□□ 0.47
ACTN1-207ENST00000553290 FAM208AQ9UK61 1670 aaKnown RBP17.97■□□□□ 0.47
ACTN1-207ENST00000553290 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
ACTN1-207ENST00000553290 IL2RBP14784 551 aa17.97■□□□□ 0.47
ACTN1-207ENST00000553290 HOXC9P31274 260 aa17.97■□□□□ 0.47
ACTN1-207ENST00000553290 RTL1A6NKG5 1358 aa17.96■□□□□ 0.47
ACTN1-207ENST00000553290 FBLN1P23142 703 aa17.96■□□□□ 0.47
ACTN1-207ENST00000553290 CARD14Q9BXL6 1004 aa17.96■□□□□ 0.47
ACTN1-207ENST00000553290 TNS2Q63HR2 1409 aa17.96■□□□□ 0.47
ACTN1-207ENST00000553290 LTV1Q96GA3 475 aaPredicted RBP17.95■□□□□ 0.46
ACTN1-207ENST00000553290 BCL11BQ9C0K0 894 aaPredicted RBP17.95■□□□□ 0.46
ACTN1-207ENST00000553290 NSD3Q9BZ95 1437 aa17.95■□□□□ 0.46
ACTN1-207ENST00000553290 POLR3GLQ9BT43 218 aa17.94■□□□□ 0.46
ACTN1-207ENST00000553290 RREB1Q92766 1687 aa17.93■□□□□ 0.46
ACTN1-207ENST00000553290 RRS1Q15050 365 aaKnown RBP17.93■□□□□ 0.46
ACTN1-207ENST00000553290 PSDA5PKW4 1024 aaPredicted RBP17.92■□□□□ 0.46
ACTN1-207ENST00000553290 PLSCR1O15162 318 aa17.92■□□□□ 0.46
ACTN1-207ENST00000553290 CGNL1Q0VF96 1302 aa17.92■□□□□ 0.46
ACTN1-207ENST00000553290 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
ACTN1-207ENST00000553290 RGPD3A6NKT7 1758 aaPredicted RBP17.91■□□□□ 0.46
ACTN1-207ENST00000553290 RGPD4Q7Z3J3 1758 aa17.91■□□□□ 0.46
ACTN1-207ENST00000553290 R3HDM1Q15032 1099 aaKnown RBP17.9■□□□□ 0.46
ACTN1-207ENST00000553290 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
ACTN1-207ENST00000553290 SMG6Q86US8 1419 aaKnown RBP17.89■□□□□ 0.46
ACTN1-207ENST00000553290 NUP188Q5SRE5 1749 aa17.89■□□□□ 0.46
ACTN1-207ENST00000553290 FLT4P35916 1363 aa17.89■□□□□ 0.45
ACTN1-207ENST00000553290 RGPD2P0DJD1 1756 aa17.88■□□□□ 0.45
ACTN1-207ENST00000553290 INSRP06213 1382 aa17.88■□□□□ 0.45
ACTN1-207ENST00000553290 PTF1AQ7RTS3 328 aa17.87■□□□□ 0.45
ACTN1-207ENST00000553290 HSP90AB2PQ58FF8 381 aa17.86■□□□□ 0.45
ACTN1-207ENST00000553290 NBPF6Q5VWK0 638 aa17.86■□□□□ 0.45
ACTN1-207ENST00000553290 NBPF4Q96M43 638 aa17.86■□□□□ 0.45
ACTN1-207ENST00000553290 LRP5O75197 1615 aa17.86■□□□□ 0.45
ACTN1-207ENST00000553290 NHSQ6T4R5 1651 aa17.85■□□□□ 0.45
ACTN1-207ENST00000553290 PANK3Q9H999 370 aa17.85■□□□□ 0.45
ACTN1-207ENST00000553290 KCNQ2O43526 872 aa17.84■□□□□ 0.45
ACTN1-207ENST00000553290 DDX54Q8TDD1 881 aaKnown RBP17.84■□□□□ 0.45
ACTN1-207ENST00000553290 ACSBG1Q96GR2 724 aa17.84■□□□□ 0.45
ACTN1-207ENST00000553290 EMILIN1Q9Y6C2 1016 aa17.84■□□□□ 0.45
ACTN1-207ENST00000553290 KAT6BQ8WYB5 2073 aa17.83■□□□□ 0.45
ACTN1-207ENST00000553290 ZCRB1Q8TBF4 217 aaKnown RBP17.83■□□□□ 0.44
ACTN1-207ENST00000553290 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
ACTN1-207ENST00000553290 ANKRD26Q9UPS8 1709 aa17.83■□□□□ 0.44
ACTN1-207ENST00000553290 PPM1GO15355 546 aaPredicted RBP17.82■□□□□ 0.44
ACTN1-207ENST00000553290 RAPGEF4Q8WZA2 1011 aa17.82■□□□□ 0.44
ACTN1-207ENST00000553290 MEGF6O75095 1541 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms