RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
LINC02407-202ENST00000553247 GGCXP38435 758 aa12.15□□□□□ -0.46
LINC02407-202ENST00000553247 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
LINC02407-202ENST00000553247 AAASQ9NRG9 546 aa12.15□□□□□ -0.46
LINC02407-202ENST00000553247 TBX22Q9Y458 520 aa12.15□□□□□ -0.46
LINC02407-202ENST00000553247 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
LINC02407-202ENST00000553247 FAM187AA6NFU0 413 aa12.14□□□□□ -0.47
LINC02407-202ENST00000553247 SLC26A8Q96RN1 970 aa12.14□□□□□ -0.47
LINC02407-202ENST00000553247 TMEM131LA2VDJ0 1609 aa12.14□□□□□ -0.47
LINC02407-202ENST00000553247 RIMS2Q9UQ26 1411 aa12.13□□□□□ -0.47
LINC02407-202ENST00000553247 LRRC7Q96NW7 1537 aa12.13□□□□□ -0.47
LINC02407-202ENST00000553247 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
LINC02407-202ENST00000553247 PRR20EP86478 221 aa12.13□□□□□ -0.47
LINC02407-202ENST00000553247 PRR20CP86479 221 aa12.13□□□□□ -0.47
LINC02407-202ENST00000553247 PRR20DP86480 221 aa12.13□□□□□ -0.47
LINC02407-202ENST00000553247 PRR20BP86481 221 aa12.13□□□□□ -0.47
LINC02407-202ENST00000553247 PRR20AP86496 221 aa12.13□□□□□ -0.47
LINC02407-202ENST00000553247 PLEKHG1Q9ULL1 1385 aa12.13□□□□□ -0.47
LINC02407-202ENST00000553247 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
LINC02407-202ENST00000553247 TRIM52Q96A61 297 aa12.12□□□□□ -0.47
LINC02407-202ENST00000553247 STRCP1A6NGW2 1772 aa12.11□□□□□ -0.47
LINC02407-202ENST00000553247 STK25O00506 426 aa12.1□□□□□ -0.47
LINC02407-202ENST00000553247 PPP1R15AO75807 674 aaPredicted RBP12.1□□□□□ -0.47
LINC02407-202ENST00000553247 HSPA1LP34931 641 aa12.1□□□□□ -0.47
LINC02407-202ENST00000553247 ZNF516Q92618 1163 aa12.1□□□□□ -0.47
LINC02407-202ENST00000553247 BCANQ96GW7 911 aa12.09□□□□□ -0.47
LINC02407-202ENST00000553247 PROSER2Q86WR7 435 aaPredicted RBP12.08□□□□□ -0.48
LINC02407-202ENST00000553247 PIK3R4Q99570 1358 aa12.07□□□□□ -0.48
LINC02407-202ENST00000553247 MYO5BQ9ULV0 1848 aa12.07□□□□□ -0.48
LINC02407-202ENST00000553247 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
LINC02407-202ENST00000553247 MPHOSPH9Q99550 1183 aa12.07□□□□□ -0.48
LINC02407-202ENST00000553247 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
LINC02407-202ENST00000553247 RPGRIP1LQ68CZ1 1315 aa12.07□□□□□ -0.48
LINC02407-202ENST00000553247 HRCP23327 699 aa12.06□□□□□ -0.48
LINC02407-202ENST00000553247 NUTM2DQ5VT03 806 aaPredicted RBP12.06□□□□□ -0.48
LINC02407-202ENST00000553247 ALKQ9UM73 1620 aa12.06□□□□□ -0.48
LINC02407-202ENST00000553247 TRPM2O94759 1503 aa12.06□□□□□ -0.48
LINC02407-202ENST00000553247 SPHKAPQ2M3C7 1700 aa12.06□□□□□ -0.48
LINC02407-202ENST00000553247 TMEM94Q12767 1356 aa12.05□□□□□ -0.48
LINC02407-202ENST00000553247 EVI5O60447 810 aa12.05□□□□□ -0.48
LINC02407-202ENST00000553247 SLC19A1P41440 591 aa12.05□□□□□ -0.48
LINC02407-202ENST00000553247 PIP4K2BP78356 416 aa12.05□□□□□ -0.48
LINC02407-202ENST00000553247 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
LINC02407-202ENST00000553247 NCOA3Q9Y6Q9 1424 aa12.04□□□□□ -0.48
LINC02407-202ENST00000553247 ZNF326Q5BKZ1 582 aaKnown RBP12.04□□□□□ -0.48
LINC02407-202ENST00000553247 NKTRP30414 1462 aaKnown RBP12.03□□□□□ -0.48
LINC02407-202ENST00000553247 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
LINC02407-202ENST00000553247 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
LINC02407-202ENST00000553247 CHD2O14647 1828 aaKnown RBP12.02□□□□□ -0.48
LINC02407-202ENST00000553247 NWD1Q149M9 1564 aa12.02□□□□□ -0.49
LINC02407-202ENST00000553247 AMOTL2Q9Y2J4 779 aa12.02□□□□□ -0.49
LINC02407-202ENST00000553247 XIRP1Q702N8 1843 aaKnown RBP12.02□□□□□ -0.49
LINC02407-202ENST00000553247 FAM135BQ49AJ0 1406 aa12.02□□□□□ -0.49
LINC02407-202ENST00000553247 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
LINC02407-202ENST00000553247 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
LINC02407-202ENST00000553247 DIP2AQ14689 1571 aa12.01□□□□□ -0.49
LINC02407-202ENST00000553247 LCE2CQ5TA81 110 aa12□□□□□ -0.49
LINC02407-202ENST00000553247 RBM33Q96EV2 1170 aaKnown RBP12□□□□□ -0.49
LINC02407-202ENST00000553247 C19orf44Q9H6X5 657 aa12□□□□□ -0.49
LINC02407-202ENST00000553247 SETBP1Q9Y6X0 1596 aa12□□□□□ -0.49
LINC02407-202ENST00000553247 SPRYD7Q5W111 196 aa11.99□□□□□ -0.49
LINC02407-202ENST00000553247 SLAIN2Q9P270 581 aa11.99□□□□□ -0.49
LINC02407-202ENST00000553247 RGS17Q9UGC6 210 aaPredicted RBP11.99□□□□□ -0.49
LINC02407-202ENST00000553247 KIF1BO60333 1816 aa11.98□□□□□ -0.49
LINC02407-202ENST00000553247 NEXMIFQ5QGS0 1516 aa11.98□□□□□ -0.49
LINC02407-202ENST00000553247 PTPRUQ92729 1446 aa11.98□□□□□ -0.49
LINC02407-202ENST00000553247 METP08581 1390 aa11.98□□□□□ -0.49
LINC02407-202ENST00000553247 MSH6P52701 1360 aa11.98□□□□□ -0.49
LINC02407-202ENST00000553247 RAB3GAP2Q9H2M9 1393 aa11.98□□□□□ -0.49
LINC02407-202ENST00000553247 TRIM6-TRIM34B2RNG4 842 aa11.97□□□□□ -0.49
LINC02407-202ENST00000553247 GMPR2Q9P2T1 348 aaKnown RBP11.97□□□□□ -0.49
LINC02407-202ENST00000553247 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
LINC02407-202ENST00000553247 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
LINC02407-202ENST00000553247 CCDC144AA2RUR9 1427 aa11.96□□□□□ -0.49
LINC02407-202ENST00000553247 SPATA31E1Q6ZUB1 1445 aa11.96□□□□□ -0.49
LINC02407-202ENST00000553247 CADPS2Q86UW7 1296 aa11.96□□□□□ -0.49
LINC02407-202ENST00000553247 DACH1Q9UI36 760 aa11.95□□□□□ -0.5
LINC02407-202ENST00000553247 ANKRD30BQ9BXX2 1392 aa11.94□□□□□ -0.5
LINC02407-202ENST00000553247 SETD1AO15047 1707 aaKnown RBP11.94□□□□□ -0.5
LINC02407-202ENST00000553247 ATF3P18847 181 aa11.93□□□□□ -0.5
LINC02407-202ENST00000553247 RGL3Q3MIN7 710 aa11.93□□□□□ -0.5
LINC02407-202ENST00000553247 FBXW7Q969H0 707 aa11.93□□□□□ -0.5
LINC02407-202ENST00000553247 EMID1Q96A84 441 aaPredicted RBP11.93□□□□□ -0.5
LINC02407-202ENST00000553247 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
LINC02407-202ENST00000553247 TNFRSF10AO00220 468 aa11.92□□□□□ -0.5
LINC02407-202ENST00000553247 TERTO14746 1132 aaKnown RBP11.92□□□□□ -0.5
LINC02407-202ENST00000553247 GDF9O60383 454 aa11.92□□□□□ -0.5
LINC02407-202ENST00000553247 C14orf37Q86TY3 774 aa11.92□□□□□ -0.5
LINC02407-202ENST00000553247 CRIPAKQ8N1N5 446 aa11.92□□□□□ -0.5
LINC02407-202ENST00000553247 PRAG1Q86YV5 1406 aa11.92□□□□□ -0.5
LINC02407-202ENST00000553247 DCCP43146 1447 aa11.9□□□□□ -0.5
LINC02407-202ENST00000553247 XRN1Q8IZH2 1706 aaKnown RBP11.9□□□□□ -0.5
LINC02407-202ENST00000553247 PPLO60437 1756 aa11.9□□□□□ -0.51
LINC02407-202ENST00000553247 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
LINC02407-202ENST00000553247 TYW1BQ6NUM6 668 aa11.89□□□□□ -0.51
LINC02407-202ENST00000553247 SIRT1Q96EB6 747 aa11.89□□□□□ -0.51
LINC02407-202ENST00000553247 C14orf93Q9H972 538 aaKnown RBP11.89□□□□□ -0.51
LINC02407-202ENST00000553247 ROBO2Q9HCK4 1378 aa11.88□□□□□ -0.51
LINC02407-202ENST00000553247 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.88□□□□□ -0.51
LINC02407-202ENST00000553247 PTCH1Q13635 1447 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms