RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 CDCA7Q9BWT1 371 aaPredicted RBP24.44■■□□□ 1.5
CACNB3-222ENST00000552465 LRRC37A3O60309 1634 aa24.43■■□□□ 1.5
CACNB3-222ENST00000552465 PDGFDQ9GZP0 370 aaPredicted RBP24.42■■□□□ 1.5
CACNB3-222ENST00000552465 ARHGEF25Q86VW2 580 aa24.41■■□□□ 1.5
CACNB3-222ENST00000552465 BCL9O00512 1426 aa24.41■■□□□ 1.5
CACNB3-222ENST00000552465 RGPD3A6NKT7 1758 aaPredicted RBP24.4■■□□□ 1.5
CACNB3-222ENST00000552465 RGPD4Q7Z3J3 1758 aa24.4■■□□□ 1.5
CACNB3-222ENST00000552465 CARD10Q9BWT7 1032 aa24.39■■□□□ 1.49
CACNB3-222ENST00000552465 COL18A1P39060 1754 aa24.39■■□□□ 1.49
CACNB3-222ENST00000552465 ZBTB7AO95365 584 aa24.38■■□□□ 1.49
CACNB3-222ENST00000552465 KCNH5Q8NCM2 988 aa24.38■■□□□ 1.49
CACNB3-222ENST00000552465 ZNF692Q9BU19 519 aaPredicted RBP24.38■■□□□ 1.49
CACNB3-222ENST00000552465 SBF2Q86WG5 1849 aa24.38■■□□□ 1.49
CACNB3-222ENST00000552465 TTC21BQ7Z4L5 1316 aa24.37■■□□□ 1.49
CACNB3-222ENST00000552465 EVC2Q86UK5 1308 aa24.37■■□□□ 1.49
CACNB3-222ENST00000552465 CPSF1Q10570 1443 aaKnown RBP24.37■■□□□ 1.49
CACNB3-222ENST00000552465 CSB-PGBD3P0DP91 1061 aa24.36■■□□□ 1.49
CACNB3-222ENST00000552465 PTGER2P43116 358 aa24.36■■□□□ 1.49
CACNB3-222ENST00000552465 TXNRD1Q16881 649 aa24.36■■□□□ 1.49
CACNB3-222ENST00000552465 CASZ1Q86V15 1759 aa24.36■■□□□ 1.49
CACNB3-222ENST00000552465 PIK3C2AO00443 1686 aa24.35■■□□□ 1.49
CACNB3-222ENST00000552465 QRICH2Q9H0J4 1663 aa24.35■■□□□ 1.49
CACNB3-222ENST00000552465 EXOC5O00471 708 aa24.35■■□□□ 1.49
CACNB3-222ENST00000552465 STK32BQ9NY57 414 aa24.35■■□□□ 1.49
CACNB3-222ENST00000552465 SOX12O15370 315 aa24.34■■□□□ 1.49
CACNB3-222ENST00000552465 ATF5Q9Y2D1 282 aaPredicted RBP24.34■■□□□ 1.49
CACNB3-222ENST00000552465 SLC15A2Q16348 729 aa24.33■■□□□ 1.49
CACNB3-222ENST00000552465 TTC21AQ8NDW8 1320 aa24.32■■□□□ 1.48
CACNB3-222ENST00000552465 L3MBTL2Q969R5 705 aa24.31■■□□□ 1.48
CACNB3-222ENST00000552465 CCDC7Q96M83 1385 aa24.29■■□□□ 1.48
CACNB3-222ENST00000552465 SYT17Q9BSW7 474 aa24.28■■□□□ 1.48
CACNB3-222ENST00000552465 WNK3Q9BYP7 1800 aa24.28■■□□□ 1.48
CACNB3-222ENST00000552465 FHDC1Q9C0D6 1143 aaPredicted RBP24.27■■□□□ 1.48
CACNB3-222ENST00000552465 MTFR1LQ9H019 292 aa24.27■■□□□ 1.48
CACNB3-222ENST00000552465 AKAP12Q02952 1782 aa24.25■■□□□ 1.47
CACNB3-222ENST00000552465 ZNF784Q8NCA9 323 aaPredicted RBP24.25■■□□□ 1.47
CACNB3-222ENST00000552465 SGIP1Q9BQI5 828 aa24.25■■□□□ 1.47
CACNB3-222ENST00000552465 NFAT5O94916 1531 aa24.25■■□□□ 1.47
CACNB3-222ENST00000552465 TRPM1Q7Z4N2 1603 aa24.24■■□□□ 1.47
CACNB3-222ENST00000552465 MYOM1P52179 1685 aa24.24■■□□□ 1.47
CACNB3-222ENST00000552465 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
CACNB3-222ENST00000552465 ACSBG1Q96GR2 724 aa24.23■■□□□ 1.47
CACNB3-222ENST00000552465 TNS2Q63HR2 1409 aa24.23■■□□□ 1.47
CACNB3-222ENST00000552465 RGPD5Q99666 1765 aa24.23■■□□□ 1.47
CACNB3-222ENST00000552465 ROCK2O75116 1388 aaKnown RBP24.2■■□□□ 1.46
CACNB3-222ENST00000552465 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.2■■□□□ 1.46
CACNB3-222ENST00000552465 NLRP2Q9NX02 1062 aa24.2■■□□□ 1.46
CACNB3-222ENST00000552465 ABCC6O95255 1503 aa24.2■■□□□ 1.46
CACNB3-222ENST00000552465 USP31Q70CQ4 1352 aa24.19■■□□□ 1.46
CACNB3-222ENST00000552465 ERBB3P21860 1342 aa24.19■■□□□ 1.46
CACNB3-222ENST00000552465 IL2RBP14784 551 aa24.18■■□□□ 1.46
CACNB3-222ENST00000552465 ARXQ96QS3 562 aa24.18■■□□□ 1.46
CACNB3-222ENST00000552465 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
CACNB3-222ENST00000552465 NHSQ6T4R5 1651 aa24.15■■□□□ 1.46
CACNB3-222ENST00000552465 NME9Q86XW9 330 aa24.15■■□□□ 1.46
CACNB3-222ENST00000552465 ZNF827Q17R98 1081 aa24.13■■□□□ 1.45
CACNB3-222ENST00000552465 ANKRD24Q8TF21 1146 aa24.13■■□□□ 1.45
CACNB3-222ENST00000552465 LRRC4BQ9NT99 713 aa24.13■■□□□ 1.45
CACNB3-222ENST00000552465 NEUROD1Q13562 356 aa24.12■■□□□ 1.45
CACNB3-222ENST00000552465 MAP3K5Q99683 1374 aa24.12■■□□□ 1.45
CACNB3-222ENST00000552465 SBNO2Q9Y2G9 1366 aa24.12■■□□□ 1.45
CACNB3-222ENST00000552465 PAPPAQ13219 1627 aa24.1■■□□□ 1.45
CACNB3-222ENST00000552465 CD163L1Q9NR16 1453 aa24.09■■□□□ 1.45
CACNB3-222ENST00000552465 TMC1Q8TDI8 760 aa24.09■■□□□ 1.45
CACNB3-222ENST00000552465 MON2Q7Z3U7 1717 aa24.08■■□□□ 1.45
CACNB3-222ENST00000552465 HDGFL2Q7Z4V5 671 aaPredicted RBP24.08■■□□□ 1.45
CACNB3-222ENST00000552465 AKT1S1Q96B36 256 aa24.08■■□□□ 1.45
CACNB3-222ENST00000552465 SLC16A10Q8TF71 515 aa24.07■■□□□ 1.44
CACNB3-222ENST00000552465 SLC12A5Q9H2X9 1139 aa24.07■■□□□ 1.44
CACNB3-222ENST00000552465 C1QTNF8P60827 252 aa24.06■■□□□ 1.44
CACNB3-222ENST00000552465 GPR162Q16538 588 aa24.06■■□□□ 1.44
CACNB3-222ENST00000552465 SLC27A3Q5K4L6 730 aa24.06■■□□□ 1.44
CACNB3-222ENST00000552465 USP54Q70EL1 1684 aa24.05■■□□□ 1.44
CACNB3-222ENST00000552465 DDX54Q8TDD1 881 aaKnown RBP24.05■■□□□ 1.44
CACNB3-222ENST00000552465 BTAF1O14981 1849 aa24.05■■□□□ 1.44
CACNB3-222ENST00000552465 SENP3-EIF4A1A0A087X0R7 540 aa24.03■■□□□ 1.44
CACNB3-222ENST00000552465 IP6K1Q92551 441 aa24.03■■□□□ 1.44
CACNB3-222ENST00000552465 EDC4Q6P2E9 1401 aaKnown RBP24.02■■□□□ 1.44
CACNB3-222ENST00000552465 POLD1P28340 1107 aa24.02■■□□□ 1.44
CACNB3-222ENST00000552465 CARD11Q9BXL7 1154 aa24.02■■□□□ 1.44
CACNB3-222ENST00000552465 TERF2IPQ9NYB0 399 aa24.02■■□□□ 1.44
CACNB3-222ENST00000552465 PNPLA7Q6ZV29 1317 aa24.01■■□□□ 1.43
CACNB3-222ENST00000552465 KLHL34Q8N239 644 aa24■■□□□ 1.43
CACNB3-222ENST00000552465 LTV1Q96GA3 475 aaPredicted RBP24■■□□□ 1.43
CACNB3-222ENST00000552465 LTN1O94822 1766 aa24■■□□□ 1.43
CACNB3-222ENST00000552465 CHD4Q14839 1912 aa24■■□□□ 1.43
CACNB3-222ENST00000552465 KCNQ4P56696 695 aa23.99■■□□□ 1.43
CACNB3-222ENST00000552465 TFCP2L1Q9NZI6 479 aa23.99■■□□□ 1.43
CACNB3-222ENST00000552465 PRIM1P49642 420 aaKnown RBP23.98■■□□□ 1.43
CACNB3-222ENST00000552465 SYTL4Q96C24 671 aaPredicted RBP23.98■■□□□ 1.43
CACNB3-222ENST00000552465 PUS7Q96PZ0 661 aaKnown RBP23.98■■□□□ 1.43
CACNB3-222ENST00000552465 A0A1W2PP64 1363 aa23.98■■□□□ 1.43
CACNB3-222ENST00000552465 ANKRD36BQ8N2N9 1353 aa23.95■■□□□ 1.42
CACNB3-222ENST00000552465 PELP1Q8IZL8 1130 aaKnown RBP23.95■■□□□ 1.42
CACNB3-222ENST00000552465 NLGN2Q8NFZ4 835 aa23.94■■□□□ 1.42
CACNB3-222ENST00000552465 KAT6BQ8WYB5 2073 aa23.94■■□□□ 1.42
CACNB3-222ENST00000552465 UTRNP46939 3433 aa23.93■■□□□ 1.42
CACNB3-222ENST00000552465 ZCRB1Q8TBF4 217 aaKnown RBP23.93■■□□□ 1.42
CACNB3-222ENST00000552465 MAP3K19Q56UN5 1328 aa23.92■■□□□ 1.42
CACNB3-222ENST00000552465 HOXC9P31274 260 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms