RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
DDX54-210ENST00000552375 SOX12O15370 315 aa19.69■□□□□ 0.74
DDX54-210ENST00000552375 FAM182BQ5T319 152 aa19.69■□□□□ 0.74
DDX54-210ENST00000552375 TERF2IPQ9NYB0 399 aa19.69■□□□□ 0.74
DDX54-210ENST00000552375 COL18A1P39060 1754 aa19.69■□□□□ 0.74
DDX54-210ENST00000552375 DISP2A7MBM2 1401 aa19.68■□□□□ 0.74
DDX54-210ENST00000552375 NME9Q86XW9 330 aa19.68■□□□□ 0.74
DDX54-210ENST00000552375 WDR17Q8IZU2 1322 aa19.68■□□□□ 0.74
DDX54-210ENST00000552375 BAG6P46379 1132 aa19.67■□□□□ 0.74
DDX54-210ENST00000552375 AXIN2Q9Y2T1 843 aa19.67■□□□□ 0.74
DDX54-210ENST00000552375 OVOS2A0A0J9YW53 1432 aa19.67■□□□□ 0.74
DDX54-210ENST00000552375 OVOS2Q6IE36 1432 aa19.67■□□□□ 0.74
DDX54-210ENST00000552375 RGPD1P0DJD0 1748 aa19.66■□□□□ 0.74
DDX54-210ENST00000552375 PDE3BQ13370 1112 aa19.65■□□□□ 0.74
DDX54-210ENST00000552375 FAM196AQ6ZSG2 479 aa19.65■□□□□ 0.74
DDX54-210ENST00000552375 TOM1L2Q6ZVM7 507 aa19.65■□□□□ 0.74
DDX54-210ENST00000552375 MYOM1P52179 1685 aa19.65■□□□□ 0.74
DDX54-210ENST00000552375 PARP4Q9UKK3 1724 aaKnown RBP19.65■□□□□ 0.74
DDX54-210ENST00000552375 TNS1Q9HBL0 1735 aaKnown RBP19.63■□□□□ 0.73
DDX54-210ENST00000552375 ANKRD36BQ8N2N9 1353 aa19.63■□□□□ 0.73
DDX54-210ENST00000552375 TMF1P82094 1093 aa19.63■□□□□ 0.73
DDX54-210ENST00000552375 LRRC37A3O60309 1634 aa19.62■□□□□ 0.73
DDX54-210ENST00000552375 OVOS2A0A0G2JMS6 1433 aa19.6■□□□□ 0.73
DDX54-210ENST00000552375 TRIM37O94972 964 aa19.6■□□□□ 0.73
DDX54-210ENST00000552375 CSB-PGBD3P0DP91 1061 aa19.6■□□□□ 0.73
DDX54-210ENST00000552375 CARD10Q9BWT7 1032 aa19.6■□□□□ 0.73
DDX54-210ENST00000552375 ERBB3P21860 1342 aa19.59■□□□□ 0.73
DDX54-210ENST00000552375 EN1Q05925 392 aaPredicted RBP19.59■□□□□ 0.73
DDX54-210ENST00000552375 CDCA7Q9BWT1 371 aaPredicted RBP19.59■□□□□ 0.73
DDX54-210ENST00000552375 CCDC7Q96M83 1385 aa19.58■□□□□ 0.73
DDX54-210ENST00000552375 WNK3Q9BYP7 1800 aa19.58■□□□□ 0.72
DDX54-210ENST00000552375 PARD3Q8TEW0 1356 aa19.57■□□□□ 0.72
DDX54-210ENST00000552375 C11orf95C9JLR9 678 aaPredicted RBP19.57■□□□□ 0.72
DDX54-210ENST00000552375 DDB1Q16531 1140 aa19.57■□□□□ 0.72
DDX54-210ENST00000552375 CDCA8Q53HL2 280 aa19.57■□□□□ 0.72
DDX54-210ENST00000552375 KIF20BQ96Q89 1820 aa19.56■□□□□ 0.72
DDX54-210ENST00000552375 PEAK1Q9H792 1746 aa19.56■□□□□ 0.72
DDX54-210ENST00000552375 TNS2Q63HR2 1409 aa19.54■□□□□ 0.72
DDX54-210ENST00000552375 COG3Q96JB2 828 aa19.54■□□□□ 0.72
DDX54-210ENST00000552375 RGPD5Q99666 1765 aa19.54■□□□□ 0.72
DDX54-210ENST00000552375 BCL9O00512 1426 aa19.53■□□□□ 0.72
DDX54-210ENST00000552375 LTN1O94822 1766 aa19.53■□□□□ 0.72
DDX54-210ENST00000552375 APBA3O96018 575 aa19.53■□□□□ 0.72
DDX54-210ENST00000552375 CAMKK2Q96RR4 588 aa19.53■□□□□ 0.72
DDX54-210ENST00000552375 HSPA5P11021 654 aaKnown RBP19.52■□□□□ 0.72
DDX54-210ENST00000552375 EZH2Q15910 746 aaKnown RBP19.52■□□□□ 0.72
DDX54-210ENST00000552375 ANKRD24Q8TF21 1146 aa19.51■□□□□ 0.71
DDX54-210ENST00000552375 POLR3GLQ9BT43 218 aa19.5■□□□□ 0.71
DDX54-210ENST00000552375 NLRP2Q9NX02 1062 aa19.5■□□□□ 0.71
DDX54-210ENST00000552375 MAP3K19Q56UN5 1328 aa19.5■□□□□ 0.71
DDX54-210ENST00000552375 RTL1A6NKG5 1358 aa19.49■□□□□ 0.71
DDX54-210ENST00000552375 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
DDX54-210ENST00000552375 MARCH10Q8NA82 808 aaPredicted RBP19.49■□□□□ 0.71
DDX54-210ENST00000552375 IP6K1Q92551 441 aa19.49■□□□□ 0.71
DDX54-210ENST00000552375 PSDA5PKW4 1024 aaPredicted RBP19.48■□□□□ 0.71
DDX54-210ENST00000552375 RREB1Q92766 1687 aa19.48■□□□□ 0.71
DDX54-210ENST00000552375 FYB1O15117 783 aa19.47■□□□□ 0.71
DDX54-210ENST00000552375 NSD3Q9BZ95 1437 aa19.47■□□□□ 0.71
DDX54-210ENST00000552375 EXOC5O00471 708 aa19.46■□□□□ 0.71
DDX54-210ENST00000552375 IL2RBP14784 551 aa19.46■□□□□ 0.71
DDX54-210ENST00000552375 GGNBP2Q9H3C7 697 aa19.46■□□□□ 0.71
DDX54-210ENST00000552375 LRP5O75197 1615 aa19.46■□□□□ 0.71
DDX54-210ENST00000552375 HOXC9P31274 260 aa19.45■□□□□ 0.7
DDX54-210ENST00000552375 FAM208AQ9UK61 1670 aaKnown RBP19.45■□□□□ 0.7
DDX54-210ENST00000552375 AMPHP49418 695 aa19.44■□□□□ 0.7
DDX54-210ENST00000552375 R3HDM1Q15032 1099 aaKnown RBP19.44■□□□□ 0.7
DDX54-210ENST00000552375 BCL11BQ9C0K0 894 aaPredicted RBP19.44■□□□□ 0.7
DDX54-210ENST00000552375 NUP188Q5SRE5 1749 aa19.44■□□□□ 0.7
DDX54-210ENST00000552375 RGPD3A6NKT7 1758 aaPredicted RBP19.44■□□□□ 0.7
DDX54-210ENST00000552375 RGPD4Q7Z3J3 1758 aa19.44■□□□□ 0.7
DDX54-210ENST00000552375 FBLN1P23142 703 aa19.42■□□□□ 0.7
DDX54-210ENST00000552375 RRS1Q15050 365 aaKnown RBP19.42■□□□□ 0.7
DDX54-210ENST00000552375 LTV1Q96GA3 475 aaPredicted RBP19.42■□□□□ 0.7
DDX54-210ENST00000552375 CARD14Q9BXL6 1004 aa19.42■□□□□ 0.7
DDX54-210ENST00000552375 PTF1AQ7RTS3 328 aa19.41■□□□□ 0.7
DDX54-210ENST00000552375 ANKRD26Q9UPS8 1709 aa19.4■□□□□ 0.7
DDX54-210ENST00000552375 SBF2Q86WG5 1849 aa19.4■□□□□ 0.7
DDX54-210ENST00000552375 PLSCR1O15162 318 aa19.4■□□□□ 0.7
DDX54-210ENST00000552375 KIF24Q5T7B8 1368 aa19.4■□□□□ 0.7
DDX54-210ENST00000552375 SMG6Q86US8 1419 aaKnown RBP19.4■□□□□ 0.7
DDX54-210ENST00000552375 FLT4P35916 1363 aa19.38■□□□□ 0.69
DDX54-210ENST00000552375 NBPF14Q5TI25 921 aa19.38■□□□□ 0.69
DDX54-210ENST00000552375 NHSQ6T4R5 1651 aa19.38■□□□□ 0.69
DDX54-210ENST00000552375 CGNL1Q0VF96 1302 aa19.37■□□□□ 0.69
DDX54-210ENST00000552375 MEGF6O75095 1541 aa19.36■□□□□ 0.69
DDX54-210ENST00000552375 INSRP06213 1382 aa19.36■□□□□ 0.69
DDX54-210ENST00000552375 RGPD2P0DJD1 1756 aa19.34■□□□□ 0.69
DDX54-210ENST00000552375 KCNQ2O43526 872 aa19.34■□□□□ 0.69
DDX54-210ENST00000552375 ACSBG1Q96GR2 724 aa19.33■□□□□ 0.68
DDX54-210ENST00000552375 ANO8Q9HCE9 1232 aaPredicted RBP19.33■□□□□ 0.68
DDX54-210ENST00000552375 HSP90AB2PQ58FF8 381 aa19.32■□□□□ 0.68
DDX54-210ENST00000552375 NBPF6Q5VWK0 638 aa19.32■□□□□ 0.68
DDX54-210ENST00000552375 NBPF4Q96M43 638 aa19.32■□□□□ 0.68
DDX54-210ENST00000552375 EMILIN1Q9Y6C2 1016 aa19.32■□□□□ 0.68
DDX54-210ENST00000552375 PROM2Q8N271 834 aa19.31■□□□□ 0.68
DDX54-210ENST00000552375 MAP2P11137 1827 aaKnown RBP19.3■□□□□ 0.68
DDX54-210ENST00000552375 TXNRD1Q16881 649 aa19.3■□□□□ 0.68
DDX54-210ENST00000552375 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
DDX54-210ENST00000552375 KIF7Q2M1P5 1343 aa19.29■□□□□ 0.68
DDX54-210ENST00000552375 USHBP1Q8N6Y0 703 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms