RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 PCDH10Q9P2E7 1040 aa17.21■□□□□ 0.35
RBFOX1-214ENST00000552089 TOPAZ1Q8N9V7 1692 aa17.21■□□□□ 0.35
RBFOX1-214ENST00000552089 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
RBFOX1-214ENST00000552089 NUTM2GQ5VZR2 741 aa17.2■□□□□ 0.34
RBFOX1-214ENST00000552089 BCL9O00512 1426 aa17.2■□□□□ 0.34
RBFOX1-214ENST00000552089 PIK3C2GO75747 1445 aa17.2■□□□□ 0.34
RBFOX1-214ENST00000552089 PRR36Q9H6K5 1346 aa17.19■□□□□ 0.34
RBFOX1-214ENST00000552089 PAPPAQ13219 1627 aa17.19■□□□□ 0.34
RBFOX1-214ENST00000552089 KIF3CO14782 793 aa17.19■□□□□ 0.34
RBFOX1-214ENST00000552089 CRB1P82279 1406 aa17.19■□□□□ 0.34
RBFOX1-214ENST00000552089 COL5A2P05997 1499 aaPredicted RBP17.19■□□□□ 0.34
RBFOX1-214ENST00000552089 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
RBFOX1-214ENST00000552089 MARCH10Q8NA82 808 aaPredicted RBP17.18■□□□□ 0.34
RBFOX1-214ENST00000552089 EIF3AQ14152 1382 aaKnown RBP17.17■□□□□ 0.34
RBFOX1-214ENST00000552089 CPDO75976 1380 aa17.17■□□□□ 0.34
RBFOX1-214ENST00000552089 TULP4Q9NRJ4 1543 aa17.16■□□□□ 0.34
RBFOX1-214ENST00000552089 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
RBFOX1-214ENST00000552089 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
RBFOX1-214ENST00000552089 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
RBFOX1-214ENST00000552089 SLC16A10Q8TF71 515 aa17.14■□□□□ 0.33
RBFOX1-214ENST00000552089 KLRG1Q96E93 195 aa17.14■□□□□ 0.33
RBFOX1-214ENST00000552089 HIRIP3Q9BW71 556 aaPredicted RBP17.14■□□□□ 0.33
RBFOX1-214ENST00000552089 POGKQ9P215 609 aa17.14■□□□□ 0.33
RBFOX1-214ENST00000552089 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
RBFOX1-214ENST00000552089 WWC3Q9ULE0 1092 aa17.13■□□□□ 0.33
RBFOX1-214ENST00000552089 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
RBFOX1-214ENST00000552089 COL24A1Q17RW2 1714 aa17.11■□□□□ 0.33
RBFOX1-214ENST00000552089 WDR90Q96KV7 1748 aa17.11■□□□□ 0.33
RBFOX1-214ENST00000552089 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
RBFOX1-214ENST00000552089 HTRA3P83110 453 aa17.09■□□□□ 0.33
RBFOX1-214ENST00000552089 MINK1Q8N4C8 1332 aaPredicted RBP17.08■□□□□ 0.33
RBFOX1-214ENST00000552089 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
RBFOX1-214ENST00000552089 TOMM70O94826 608 aa17.08■□□□□ 0.32
RBFOX1-214ENST00000552089 C14orf93Q9H972 538 aaKnown RBP17.08■□□□□ 0.32
RBFOX1-214ENST00000552089 WNK3Q9BYP7 1800 aa17.08■□□□□ 0.32
RBFOX1-214ENST00000552089 SPATA31E1Q6ZUB1 1445 aa17.08■□□□□ 0.32
RBFOX1-214ENST00000552089 USP19O94966 1318 aa17.07■□□□□ 0.32
RBFOX1-214ENST00000552089 PNPLA7Q6ZV29 1317 aa17.07■□□□□ 0.32
RBFOX1-214ENST00000552089 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
RBFOX1-214ENST00000552089 PCNTO95613 3336 aa17.07■□□□□ 0.32
RBFOX1-214ENST00000552089 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
RBFOX1-214ENST00000552089 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
RBFOX1-214ENST00000552089 CDCA7Q9BWT1 371 aaPredicted RBP17.06■□□□□ 0.32
RBFOX1-214ENST00000552089 NHSQ6T4R5 1651 aa17.06■□□□□ 0.32
RBFOX1-214ENST00000552089 WASLO00401 505 aaPredicted RBP17.05■□□□□ 0.32
RBFOX1-214ENST00000552089 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
RBFOX1-214ENST00000552089 LRRC4BQ9NT99 713 aa17.05■□□□□ 0.32
RBFOX1-214ENST00000552089 BRD4O60885 1362 aaPredicted RBP17.04■□□□□ 0.32
RBFOX1-214ENST00000552089 QSER1Q2KHR3 1735 aa17.04■□□□□ 0.32
RBFOX1-214ENST00000552089 ACSBG1Q96GR2 724 aa17.04■□□□□ 0.32
RBFOX1-214ENST00000552089 GCP02774 474 aa17.03■□□□□ 0.32
RBFOX1-214ENST00000552089 ABTB2Q8N961 1025 aa17.03■□□□□ 0.32
RBFOX1-214ENST00000552089 ITSN1Q15811 1721 aa17.02■□□□□ 0.31
RBFOX1-214ENST00000552089 ARHGEF28Q8N1W1 1705 aaKnown RBP17.02■□□□□ 0.31
RBFOX1-214ENST00000552089 TFCP2L1Q9NZI6 479 aa17.01■□□□□ 0.31
RBFOX1-214ENST00000552089 TNS2Q63HR2 1409 aa17■□□□□ 0.31
RBFOX1-214ENST00000552089 EXOC5O00471 708 aa16.99■□□□□ 0.31
RBFOX1-214ENST00000552089 USP6P35125 1406 aa16.99■□□□□ 0.31
RBFOX1-214ENST00000552089 WDR17Q8IZU2 1322 aa16.99■□□□□ 0.31
RBFOX1-214ENST00000552089 HSPA1AP0DMV8 641 aaKnown RBP16.98■□□□□ 0.31
RBFOX1-214ENST00000552089 HSPA1BP0DMV9 641 aaKnown RBP16.98■□□□□ 0.31
RBFOX1-214ENST00000552089 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
RBFOX1-214ENST00000552089 POLR3AO14802 1390 aaPredicted RBP16.97■□□□□ 0.31
RBFOX1-214ENST00000552089 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
RBFOX1-214ENST00000552089 TRAK1Q9UPV9 953 aa16.97■□□□□ 0.31
RBFOX1-214ENST00000552089 CD2APQ9Y5K6 639 aa16.97■□□□□ 0.31
RBFOX1-214ENST00000552089 BTAF1O14981 1849 aa16.96■□□□□ 0.31
RBFOX1-214ENST00000552089 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.31
RBFOX1-214ENST00000552089 ACEP12821 1306 aa16.96■□□□□ 0.31
RBFOX1-214ENST00000552089 MSL1Q68DK7 614 aa16.96■□□□□ 0.3
RBFOX1-214ENST00000552089 RBM46Q8TBY0 533 aaKnown RBP16.96■□□□□ 0.3
RBFOX1-214ENST00000552089 MSH5O43196 834 aa16.95■□□□□ 0.3
RBFOX1-214ENST00000552089 SLC27A3Q5K4L6 730 aa16.95■□□□□ 0.3
RBFOX1-214ENST00000552089 DIEXFQ68CQ4 756 aaKnown RBP16.95■□□□□ 0.3
RBFOX1-214ENST00000552089 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
RBFOX1-214ENST00000552089 CARD10Q9BWT7 1032 aa16.93■□□□□ 0.3
RBFOX1-214ENST00000552089 ADGRB1O14514 1584 aa16.93■□□□□ 0.3
RBFOX1-214ENST00000552089 ABCC6O95255 1503 aa16.92■□□□□ 0.3
RBFOX1-214ENST00000552089 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
RBFOX1-214ENST00000552089 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
RBFOX1-214ENST00000552089 C16orf71Q8IYS4 520 aaPredicted RBP16.91■□□□□ 0.3
RBFOX1-214ENST00000552089 AXIN2Q9Y2T1 843 aa16.91■□□□□ 0.3
RBFOX1-214ENST00000552089 IGSF1Q8N6C5 1336 aa16.91■□□□□ 0.3
RBFOX1-214ENST00000552089 KCNQ4P56696 695 aa16.9■□□□□ 0.3
RBFOX1-214ENST00000552089 FSTL1Q12841 308 aa16.9■□□□□ 0.3
RBFOX1-214ENST00000552089 FAM161AQ3B820 660 aa16.89■□□□□ 0.29
RBFOX1-214ENST00000552089 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
RBFOX1-214ENST00000552089 COL18A1P39060 1754 aa16.89■□□□□ 0.29
RBFOX1-214ENST00000552089 SLIT3O75094 1523 aa16.88■□□□□ 0.29
RBFOX1-214ENST00000552089 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
RBFOX1-214ENST00000552089 COL23A1Q86Y22 540 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-214ENST00000552089 CCDC7Q96M83 1385 aa16.88■□□□□ 0.29
RBFOX1-214ENST00000552089 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
RBFOX1-214ENST00000552089 PLEKHG3A1L390 1219 aa16.86■□□□□ 0.29
RBFOX1-214ENST00000552089 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
RBFOX1-214ENST00000552089 NLRP6P59044 892 aa16.84■□□□□ 0.29
RBFOX1-214ENST00000552089 CDK19Q9BWU1 502 aa16.84■□□□□ 0.29
RBFOX1-214ENST00000552089 PIK3C2AO00443 1686 aa16.83■□□□□ 0.28
RBFOX1-214ENST00000552089 TONSLQ96HA7 1378 aa16.83■□□□□ 0.28
RBFOX1-214ENST00000552089 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms