RNA–Protein interactions for RNA: ENST00000551548.5

PFKM-224, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-224ENST00000551548 WNK3Q9BYP7 1800 aa11.9□□□□□ -0.5
PFKM-224ENST00000551548 CGNL1Q0VF96 1302 aa11.89□□□□□ -0.51
PFKM-224ENST00000551548 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
PFKM-224ENST00000551548 BRWD3Q6RI45 1802 aa11.89□□□□□ -0.51
PFKM-224ENST00000551548 VPS72Q15906 364 aa11.89□□□□□ -0.51
PFKM-224ENST00000551548 ARHGEF25Q86VW2 580 aa11.89□□□□□ -0.51
PFKM-224ENST00000551548 GJD4Q96KN9 370 aaPredicted RBP11.89□□□□□ -0.51
PFKM-224ENST00000551548 FBLN1P23142 703 aa11.88□□□□□ -0.51
PFKM-224ENST00000551548 THSD7AQ9UPZ6 1657 aa11.87□□□□□ -0.51
PFKM-224ENST00000551548 MAP2P11137 1827 aaKnown RBP11.87□□□□□ -0.51
PFKM-224ENST00000551548 FAM208AQ9UK61 1670 aaKnown RBP11.87□□□□□ -0.51
PFKM-224ENST00000551548 MAP3K19Q56UN5 1328 aa11.86□□□□□ -0.51
PFKM-224ENST00000551548 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
PFKM-224ENST00000551548 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
PFKM-224ENST00000551548 EVA1CP58658 441 aa11.86□□□□□ -0.51
PFKM-224ENST00000551548 LARP1Q6PKG0 1096 aaKnown RBP11.86□□□□□ -0.51
PFKM-224ENST00000551548 AXIN2Q9Y2T1 843 aa11.86□□□□□ -0.51
PFKM-224ENST00000551548 RGPD2P0DJD1 1756 aa11.86□□□□□ -0.51
PFKM-224ENST00000551548 NSD2O96028 1365 aa11.85□□□□□ -0.51
PFKM-224ENST00000551548 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
PFKM-224ENST00000551548 CRB1P82279 1406 aa11.85□□□□□ -0.51
PFKM-224ENST00000551548 SPATA31A1Q5TZJ5 1347 aa11.85□□□□□ -0.51
PFKM-224ENST00000551548 RTL1A6NKG5 1358 aa11.84□□□□□ -0.51
PFKM-224ENST00000551548 A0A0G2JS52 829 aa11.84□□□□□ -0.51
PFKM-224ENST00000551548 MYT1Q01538 1121 aa11.84□□□□□ -0.51
PFKM-224ENST00000551548 USP35Q9P2H5 1018 aa11.84□□□□□ -0.51
PFKM-224ENST00000551548 KNSTRNQ9Y448 316 aa11.84□□□□□ -0.51
PFKM-224ENST00000551548 BLMP54132 1417 aaPredicted RBP11.84□□□□□ -0.51
PFKM-224ENST00000551548 WDR17Q8IZU2 1322 aa11.84□□□□□ -0.51
PFKM-224ENST00000551548 LRRC37A3O60309 1634 aa11.83□□□□□ -0.52
PFKM-224ENST00000551548 CSB-PGBD3P0DP91 1061 aa11.83□□□□□ -0.52
PFKM-224ENST00000551548 AMPHP49418 695 aa11.83□□□□□ -0.52
PFKM-224ENST00000551548 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
PFKM-224ENST00000551548 ERBB3P21860 1342 aa11.83□□□□□ -0.52
PFKM-224ENST00000551548 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
PFKM-224ENST00000551548 HOXC9P31274 260 aa11.82□□□□□ -0.52
PFKM-224ENST00000551548 TNNT2P45379 298 aaPredicted RBP11.82□□□□□ -0.52
PFKM-224ENST00000551548 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
PFKM-224ENST00000551548 TOM1L2Q6ZVM7 507 aa11.82□□□□□ -0.52
PFKM-224ENST00000551548 SEPT12Q8IYM1 358 aa11.81□□□□□ -0.52
PFKM-224ENST00000551548 TCP11L2Q8N4U5 519 aa11.81□□□□□ -0.52
PFKM-224ENST00000551548 ANKRD24Q8TF21 1146 aa11.81□□□□□ -0.52
PFKM-224ENST00000551548 IP6K1Q92551 441 aa11.81□□□□□ -0.52
PFKM-224ENST00000551548 LTV1Q96GA3 475 aaPredicted RBP11.81□□□□□ -0.52
PFKM-224ENST00000551548 EMILIN1Q9Y6C2 1016 aa11.81□□□□□ -0.52
PFKM-224ENST00000551548 FLT4P35916 1363 aa11.8□□□□□ -0.52
PFKM-224ENST00000551548 SOCS7O14512 581 aa11.8□□□□□ -0.52
PFKM-224ENST00000551548 PER1O15534 1290 aaPredicted RBP11.8□□□□□ -0.52
PFKM-224ENST00000551548 CNGB1Q14028 1251 aaPredicted RBP11.8□□□□□ -0.52
PFKM-224ENST00000551548 MORC1Q86VD1 984 aa11.8□□□□□ -0.52
PFKM-224ENST00000551548 SMG6Q86US8 1419 aaKnown RBP11.79□□□□□ -0.52
PFKM-224ENST00000551548 CC2D1BQ5T0F9 858 aaKnown RBP11.79□□□□□ -0.52
PFKM-224ENST00000551548 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
PFKM-224ENST00000551548 DISP2A7MBM2 1401 aa11.78□□□□□ -0.52
PFKM-224ENST00000551548 PPM1GO15355 546 aaPredicted RBP11.78□□□□□ -0.52
PFKM-224ENST00000551548 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
PFKM-224ENST00000551548 HSP90AB2PQ58FF8 381 aa11.78□□□□□ -0.52
PFKM-224ENST00000551548 BARGINQ6ZT62 677 aa11.78□□□□□ -0.52
PFKM-224ENST00000551548 CARD10Q9BWT7 1032 aa11.78□□□□□ -0.52
PFKM-224ENST00000551548 NLRP2Q9NX02 1062 aa11.78□□□□□ -0.52
PFKM-224ENST00000551548 INSRP06213 1382 aa11.78□□□□□ -0.52
PFKM-224ENST00000551548 NPC1L1Q9UHC9 1359 aa11.78□□□□□ -0.52
PFKM-224ENST00000551548 POLKQ9UBT6 870 aa11.77□□□□□ -0.53
PFKM-224ENST00000551548 THRAP3Q9Y2W1 955 aaKnown RBP11.77□□□□□ -0.53
PFKM-224ENST00000551548 SHANK3Q9BYB0 1731 aa11.75□□□□□ -0.53
PFKM-224ENST00000551548 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
PFKM-224ENST00000551548 TNS2Q63HR2 1409 aa11.75□□□□□ -0.53
PFKM-224ENST00000551548 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
PFKM-224ENST00000551548 USHBP1Q8N6Y0 703 aa11.74□□□□□ -0.53
PFKM-224ENST00000551548 MEGF6O75095 1541 aa11.74□□□□□ -0.53
PFKM-224ENST00000551548 DDX10Q13206 875 aaKnown RBP11.73□□□□□ -0.53
PFKM-224ENST00000551548 TNS1Q9HBL0 1735 aaKnown RBP11.73□□□□□ -0.53
PFKM-224ENST00000551548 SBF2Q86WG5 1849 aa11.72□□□□□ -0.53
PFKM-224ENST00000551548 RGPD1P0DJD0 1748 aa11.72□□□□□ -0.53
PFKM-224ENST00000551548 NCAPD2Q15021 1401 aa11.72□□□□□ -0.53
PFKM-224ENST00000551548 IL2RBP14784 551 aa11.72□□□□□ -0.53
PFKM-224ENST00000551548 DDB1Q16531 1140 aa11.72□□□□□ -0.53
PFKM-224ENST00000551548 NBPF6Q5VWK0 638 aa11.72□□□□□ -0.53
PFKM-224ENST00000551548 UPF1Q92900 1129 aaKnown RBP eCLIP11.72□□□□□ -0.53
PFKM-224ENST00000551548 NBPF4Q96M43 638 aa11.72□□□□□ -0.53
PFKM-224ENST00000551548 PKD1L3Q7Z443 1732 aa11.72□□□□□ -0.53
PFKM-224ENST00000551548 COL3A1P02461 1466 aaPredicted RBP11.71□□□□□ -0.53
PFKM-224ENST00000551548 PDE3BQ13370 1112 aa11.71□□□□□ -0.53
PFKM-224ENST00000551548 EIF4A2Q14240 407 aaKnown RBP11.71□□□□□ -0.53
PFKM-224ENST00000551548 CDCA7Q9BWT1 371 aaPredicted RBP11.71□□□□□ -0.53
PFKM-224ENST00000551548 EP400Q96L91 3159 aa11.71□□□□□ -0.54
PFKM-224ENST00000551548 OVOS2A0A0G2JMS6 1433 aa11.7□□□□□ -0.54
PFKM-224ENST00000551548 MTHFSP49914 203 aa11.7□□□□□ -0.54
PFKM-224ENST00000551548 PARD3Q8TEW0 1356 aa11.69□□□□□ -0.54
PFKM-224ENST00000551548 EYA1Q99502 592 aa11.69□□□□□ -0.54
PFKM-224ENST00000551548 DOT1LQ8TEK3 1739 aa11.69□□□□□ -0.54
PFKM-224ENST00000551548 ZNF316A6NFI3 1004 aaPredicted RBP11.68□□□□□ -0.54
PFKM-224ENST00000551548 MARCH10Q8NA82 808 aaPredicted RBP11.68□□□□□ -0.54
PFKM-224ENST00000551548 NHSQ6T4R5 1651 aa11.68□□□□□ -0.54
PFKM-224ENST00000551548 IGSF1Q8N6C5 1336 aa11.67□□□□□ -0.54
PFKM-224ENST00000551548 EXOC5O00471 708 aa11.67□□□□□ -0.54
PFKM-224ENST00000551548 RAPGEF4Q8WZA2 1011 aa11.67□□□□□ -0.54
PFKM-224ENST00000551548 TATP17735 454 aaPredicted RBP11.66□□□□□ -0.54
PFKM-224ENST00000551548 PPP2R1AP30153 589 aa11.66□□□□□ -0.54
PFKM-224ENST00000551548 FAM196AQ6ZSG2 479 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms