RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 WDR17Q8IZU2 1322 aa25.62■■□□□ 1.69
PRPF40B-215ENST00000551418 DDB1Q16531 1140 aa25.61■■□□□ 1.69
PRPF40B-215ENST00000551418 MARCH10Q8NA82 808 aaPredicted RBP25.6■■□□□ 1.69
PRPF40B-215ENST00000551418 WNK3Q9BYP7 1800 aa25.59■■□□□ 1.69
PRPF40B-215ENST00000551418 OVOS2A0A0G2JMS6 1433 aa25.59■■□□□ 1.69
PRPF40B-215ENST00000551418 OVOS2A0A0J9YW53 1432 aa25.59■■□□□ 1.69
PRPF40B-215ENST00000551418 OVOS2Q6IE36 1432 aa25.59■■□□□ 1.69
PRPF40B-215ENST00000551418 KTN1Q86UP2 1357 aaKnown RBP25.58■■□□□ 1.69
PRPF40B-215ENST00000551418 NBPF14Q5TI25 921 aa25.58■■□□□ 1.69
PRPF40B-215ENST00000551418 NFAT5O94916 1531 aa25.58■■□□□ 1.68
PRPF40B-215ENST00000551418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.57■■□□□ 1.68
PRPF40B-215ENST00000551418 KCNH5Q8NCM2 988 aa25.57■■□□□ 1.68
PRPF40B-215ENST00000551418 TTC21AQ8NDW8 1320 aa25.57■■□□□ 1.68
PRPF40B-215ENST00000551418 CSB-PGBD3P0DP91 1061 aa25.55■■□□□ 1.68
PRPF40B-215ENST00000551418 CARD10Q9BWT7 1032 aa25.55■■□□□ 1.68
PRPF40B-215ENST00000551418 MON2Q7Z3U7 1717 aa25.54■■□□□ 1.68
PRPF40B-215ENST00000551418 CD163L1Q9NR16 1453 aa25.53■■□□□ 1.68
PRPF40B-215ENST00000551418 NME9Q86XW9 330 aa25.53■■□□□ 1.68
PRPF40B-215ENST00000551418 PROM2Q8N271 834 aa25.53■■□□□ 1.68
PRPF40B-215ENST00000551418 CARD11Q9BXL7 1154 aa25.52■■□□□ 1.68
PRPF40B-215ENST00000551418 BCL11BQ9C0K0 894 aaPredicted RBP25.52■■□□□ 1.68
PRPF40B-215ENST00000551418 ANO8Q9HCE9 1232 aaPredicted RBP25.52■■□□□ 1.68
PRPF40B-215ENST00000551418 C11orf95C9JLR9 678 aaPredicted RBP25.51■■□□□ 1.67
PRPF40B-215ENST00000551418 PLSCR1O15162 318 aa25.51■■□□□ 1.67
PRPF40B-215ENST00000551418 SLC12A5Q9H2X9 1139 aa25.51■■□□□ 1.67
PRPF40B-215ENST00000551418 SBNO2Q9Y2G9 1366 aa25.49■■□□□ 1.67
PRPF40B-215ENST00000551418 TMC1Q8TDI8 760 aa25.49■■□□□ 1.67
PRPF40B-215ENST00000551418 PDGFDQ9GZP0 370 aaPredicted RBP25.49■■□□□ 1.67
PRPF40B-215ENST00000551418 CDCA7Q9BWT1 371 aaPredicted RBP25.48■■□□□ 1.67
PRPF40B-215ENST00000551418 USP31Q70CQ4 1352 aa25.47■■□□□ 1.67
PRPF40B-215ENST00000551418 RGPD3A6NKT7 1758 aaPredicted RBP25.47■■□□□ 1.67
PRPF40B-215ENST00000551418 RGPD4Q7Z3J3 1758 aa25.47■■□□□ 1.67
PRPF40B-215ENST00000551418 EXOC5O00471 708 aa25.46■■□□□ 1.67
PRPF40B-215ENST00000551418 KCNQ2O43526 872 aa25.46■■□□□ 1.67
PRPF40B-215ENST00000551418 SPON1Q9HCB6 807 aa25.45■■□□□ 1.66
PRPF40B-215ENST00000551418 BCL9O00512 1426 aa25.45■■□□□ 1.66
PRPF40B-215ENST00000551418 USP54Q70EL1 1684 aa25.44■■□□□ 1.66
PRPF40B-215ENST00000551418 LTN1O94822 1766 aa25.44■■□□□ 1.66
PRPF40B-215ENST00000551418 CCDC7Q96M83 1385 aa25.43■■□□□ 1.66
PRPF40B-215ENST00000551418 NLRP2Q9NX02 1062 aa25.42■■□□□ 1.66
PRPF40B-215ENST00000551418 ERBB3P21860 1342 aa25.41■■□□□ 1.66
PRPF40B-215ENST00000551418 CASZ1Q86V15 1759 aa25.41■■□□□ 1.66
PRPF40B-215ENST00000551418 TXNRD1Q16881 649 aa25.4■■□□□ 1.66
PRPF40B-215ENST00000551418 HDGFL2Q7Z4V5 671 aaPredicted RBP25.4■■□□□ 1.66
PRPF40B-215ENST00000551418 ACSBG1Q96GR2 724 aa25.4■■□□□ 1.66
PRPF40B-215ENST00000551418 ABCC6O95255 1503 aa25.4■■□□□ 1.66
PRPF40B-215ENST00000551418 PPP1R1BQ9UD71 204 aaPredicted RBP25.39■■□□□ 1.66
PRPF40B-215ENST00000551418 A0A1W2PP64 1363 aa25.39■■□□□ 1.65
PRPF40B-215ENST00000551418 TONSLQ96HA7 1378 aa25.39■■□□□ 1.65
PRPF40B-215ENST00000551418 TNS2Q63HR2 1409 aa25.38■■□□□ 1.65
PRPF40B-215ENST00000551418 ANKRD24Q8TF21 1146 aa25.38■■□□□ 1.65
PRPF40B-215ENST00000551418 EDC4Q6P2E9 1401 aaKnown RBP25.37■■□□□ 1.65
PRPF40B-215ENST00000551418 ZBTB7AO95365 584 aa25.37■■□□□ 1.65
PRPF40B-215ENST00000551418 TESK2Q96S53 571 aa25.36■■□□□ 1.65
PRPF40B-215ENST00000551418 FBLN1P23142 703 aa25.35■■□□□ 1.65
PRPF40B-215ENST00000551418 KAT6BQ8WYB5 2073 aa25.34■■□□□ 1.65
PRPF40B-215ENST00000551418 ST20-MTHFSA0A0A6YYL1 179 aa25.34■■□□□ 1.65
PRPF40B-215ENST00000551418 IL2RBP14784 551 aa25.34■■□□□ 1.65
PRPF40B-215ENST00000551418 TERF2IPQ9NYB0 399 aa25.34■■□□□ 1.65
PRPF40B-215ENST00000551418 NHSQ6T4R5 1651 aa25.33■■□□□ 1.65
PRPF40B-215ENST00000551418 ATF5Q9Y2D1 282 aaPredicted RBP25.33■■□□□ 1.65
PRPF40B-215ENST00000551418 PTGER2P43116 358 aa25.31■■□□□ 1.64
PRPF40B-215ENST00000551418 SLC15A2Q16348 729 aa25.31■■□□□ 1.64
PRPF40B-215ENST00000551418 LTV1Q96GA3 475 aaPredicted RBP25.31■■□□□ 1.64
PRPF40B-215ENST00000551418 PUS7Q96PZ0 661 aaKnown RBP25.31■■□□□ 1.64
PRPF40B-215ENST00000551418 STK32BQ9NY57 414 aa25.31■■□□□ 1.64
PRPF40B-215ENST00000551418 BTAF1O14981 1849 aa25.29■■□□□ 1.64
PRPF40B-215ENST00000551418 IP6K1Q92551 441 aa25.29■■□□□ 1.64
PRPF40B-215ENST00000551418 NINLQ9Y2I6 1382 aa25.29■■□□□ 1.64
PRPF40B-215ENST00000551418 MYOM1P52179 1685 aa25.28■■□□□ 1.64
PRPF40B-215ENST00000551418 YY1P25490 414 aa25.27■■□□□ 1.64
PRPF40B-215ENST00000551418 DDX54Q8TDD1 881 aaKnown RBP25.25■■□□□ 1.63
PRPF40B-215ENST00000551418 MAP3K19Q56UN5 1328 aa25.25■■□□□ 1.63
PRPF40B-215ENST00000551418 RGPD2P0DJD1 1756 aa25.25■■□□□ 1.63
PRPF40B-215ENST00000551418 LRRC4BQ9NT99 713 aa25.24■■□□□ 1.63
PRPF40B-215ENST00000551418 PAPPAQ13219 1627 aa25.23■■□□□ 1.63
PRPF40B-215ENST00000551418 ZNF827Q17R98 1081 aa25.22■■□□□ 1.63
PRPF40B-215ENST00000551418 COG3Q96JB2 828 aa25.22■■□□□ 1.63
PRPF40B-215ENST00000551418 HOXC9P31274 260 aa25.21■■□□□ 1.63
PRPF40B-215ENST00000551418 SGIP1Q9BQI5 828 aa25.21■■□□□ 1.63
PRPF40B-215ENST00000551418 KCNQ4P56696 695 aa25.19■■□□□ 1.62
PRPF40B-215ENST00000551418 FAM208AQ9UK61 1670 aaKnown RBP25.19■■□□□ 1.62
PRPF40B-215ENST00000551418 AMPHP49418 695 aa25.18■■□□□ 1.62
PRPF40B-215ENST00000551418 FHDC1Q9C0D6 1143 aaPredicted RBP25.18■■□□□ 1.62
PRPF40B-215ENST00000551418 MTFR1LQ9H019 292 aa25.18■■□□□ 1.62
PRPF40B-215ENST00000551418 RRS1Q15050 365 aaKnown RBP25.17■■□□□ 1.62
PRPF40B-215ENST00000551418 GGNBP2Q9H3C7 697 aa25.17■■□□□ 1.62
PRPF40B-215ENST00000551418 FYB1O15117 783 aa25.16■■□□□ 1.62
PRPF40B-215ENST00000551418 SYT17Q9BSW7 474 aa25.16■■□□□ 1.62
PRPF40B-215ENST00000551418 ANKRD36BQ8N2N9 1353 aa25.16■■□□□ 1.62
PRPF40B-215ENST00000551418 SHANK3Q9BYB0 1731 aa25.15■■□□□ 1.62
PRPF40B-215ENST00000551418 DCAF8L1A6NGE4 600 aa25.15■■□□□ 1.62
PRPF40B-215ENST00000551418 PRIM1P49642 420 aaKnown RBP25.15■■□□□ 1.62
PRPF40B-215ENST00000551418 MEGF6O75095 1541 aa25.13■■□□□ 1.61
PRPF40B-215ENST00000551418 NBPF6Q5VWK0 638 aa25.13■■□□□ 1.61
PRPF40B-215ENST00000551418 USHBP1Q8N6Y0 703 aa25.13■■□□□ 1.61
PRPF40B-215ENST00000551418 AKT1S1Q96B36 256 aa25.13■■□□□ 1.61
PRPF40B-215ENST00000551418 SYTL4Q96C24 671 aaPredicted RBP25.13■■□□□ 1.61
PRPF40B-215ENST00000551418 NBPF4Q96M43 638 aa25.13■■□□□ 1.61
PRPF40B-215ENST00000551418 DOT1LQ8TEK3 1739 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms