RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CRB1P82279 1406 aa26.43■■□□□ 1.82
DDX54-208ENST00000551344 COL18A1P39060 1754 aa26.43■■□□□ 1.82
DDX54-208ENST00000551344 USP54Q70EL1 1684 aa26.42■■□□□ 1.82
DDX54-208ENST00000551344 TOM1L2Q6ZVM7 507 aa26.42■■□□□ 1.82
DDX54-208ENST00000551344 COG3Q96JB2 828 aa26.42■■□□□ 1.82
DDX54-208ENST00000551344 WDR17Q8IZU2 1322 aa26.41■■□□□ 1.82
DDX54-208ENST00000551344 HSPA5P11021 654 aaKnown RBP26.41■■□□□ 1.82
DDX54-208ENST00000551344 EP400Q96L91 3159 aa26.41■■□□□ 1.82
DDX54-208ENST00000551344 THSD7AQ9UPZ6 1657 aa26.41■■□□□ 1.82
DDX54-208ENST00000551344 OVOS2A0A0J9YW53 1432 aa26.4■■□□□ 1.82
DDX54-208ENST00000551344 BLMP54132 1417 aaPredicted RBP26.4■■□□□ 1.82
DDX54-208ENST00000551344 OVOS2Q6IE36 1432 aa26.4■■□□□ 1.82
DDX54-208ENST00000551344 FYB1O15117 783 aa26.38■■□□□ 1.81
DDX54-208ENST00000551344 PDE3BQ13370 1112 aa26.38■■□□□ 1.81
DDX54-208ENST00000551344 SF3B2Q13435 895 aaKnown RBP26.38■■□□□ 1.81
DDX54-208ENST00000551344 CSB-PGBD3P0DP91 1061 aa26.37■■□□□ 1.81
DDX54-208ENST00000551344 ABCC6O95255 1503 aa26.37■■□□□ 1.81
DDX54-208ENST00000551344 CARD10Q9BWT7 1032 aa26.36■■□□□ 1.81
DDX54-208ENST00000551344 FAM196AQ6ZSG2 479 aa26.35■■□□□ 1.81
DDX54-208ENST00000551344 FAM182BQ5T319 152 aa26.34■■□□□ 1.81
DDX54-208ENST00000551344 CDCA7Q9BWT1 371 aaPredicted RBP26.34■■□□□ 1.81
DDX54-208ENST00000551344 CARD14Q9BXL6 1004 aa26.33■■□□□ 1.81
DDX54-208ENST00000551344 IP6K1Q92551 441 aa26.32■■□□□ 1.8
DDX54-208ENST00000551344 GGNBP2Q9H3C7 697 aa26.32■■□□□ 1.8
DDX54-208ENST00000551344 POLR3GLQ9BT43 218 aa26.3■■□□□ 1.8
DDX54-208ENST00000551344 ERBB3P21860 1342 aa26.3■■□□□ 1.8
DDX54-208ENST00000551344 RGPD5Q99666 1765 aa26.29■■□□□ 1.8
DDX54-208ENST00000551344 C11orf95C9JLR9 678 aaPredicted RBP26.29■■□□□ 1.8
DDX54-208ENST00000551344 CCDC7Q96M83 1385 aa26.29■■□□□ 1.8
DDX54-208ENST00000551344 DDB1Q16531 1140 aa26.28■■□□□ 1.8
DDX54-208ENST00000551344 ANKRD24Q8TF21 1146 aa26.28■■□□□ 1.8
DDX54-208ENST00000551344 DEFB132Q7Z7B7 95 aa26.27■■□□□ 1.8
DDX54-208ENST00000551344 MAP3K19Q56UN5 1328 aa26.27■■□□□ 1.8
DDX54-208ENST00000551344 FBLN1P23142 703 aa26.26■■□□□ 1.79
DDX54-208ENST00000551344 BAG6P46379 1132 aa26.26■■□□□ 1.79
DDX54-208ENST00000551344 AMPHP49418 695 aa26.26■■□□□ 1.79
DDX54-208ENST00000551344 NLRP2Q9NX02 1062 aa26.26■■□□□ 1.79
DDX54-208ENST00000551344 LTN1O94822 1766 aa26.25■■□□□ 1.79
DDX54-208ENST00000551344 MYOM1P52179 1685 aa26.25■■□□□ 1.79
DDX54-208ENST00000551344 NSD3Q9BZ95 1437 aa26.25■■□□□ 1.79
DDX54-208ENST00000551344 PARP4Q9UKK3 1724 aaKnown RBP26.24■■□□□ 1.79
DDX54-208ENST00000551344 HOXC9P31274 260 aa26.23■■□□□ 1.79
DDX54-208ENST00000551344 CGNL1Q0VF96 1302 aa26.22■■□□□ 1.79
DDX54-208ENST00000551344 EXOC5O00471 708 aa26.22■■□□□ 1.79
DDX54-208ENST00000551344 TRIM37O94972 964 aa26.22■■□□□ 1.79
DDX54-208ENST00000551344 RRS1Q15050 365 aaKnown RBP26.21■■□□□ 1.79
DDX54-208ENST00000551344 DISP2A7MBM2 1401 aa26.21■■□□□ 1.79
DDX54-208ENST00000551344 LTV1Q96GA3 475 aaPredicted RBP26.19■■□□□ 1.78
DDX54-208ENST00000551344 PANK3Q9H999 370 aa26.19■■□□□ 1.78
DDX54-208ENST00000551344 RTL1A6NKG5 1358 aa26.19■■□□□ 1.78
DDX54-208ENST00000551344 IL2RBP14784 551 aa26.17■■□□□ 1.78
DDX54-208ENST00000551344 EN1Q05925 392 aaPredicted RBP26.17■■□□□ 1.78
DDX54-208ENST00000551344 RGPD1P0DJD0 1748 aa26.17■■□□□ 1.78
DDX54-208ENST00000551344 OVOS2A0A0G2JMS6 1433 aa26.16■■□□□ 1.78
DDX54-208ENST00000551344 MARCH10Q8NA82 808 aaPredicted RBP26.16■■□□□ 1.78
DDX54-208ENST00000551344 KIF24Q5T7B8 1368 aa26.16■■□□□ 1.78
DDX54-208ENST00000551344 APBA3O96018 575 aa26.15■■□□□ 1.78
DDX54-208ENST00000551344 KIF20BQ96Q89 1820 aa26.15■■□□□ 1.78
DDX54-208ENST00000551344 LRRC37A3O60309 1634 aa26.14■■□□□ 1.77
DDX54-208ENST00000551344 BCL9O00512 1426 aa26.12■■□□□ 1.77
DDX54-208ENST00000551344 WNK3Q9BYP7 1800 aa26.11■■□□□ 1.77
DDX54-208ENST00000551344 HSP90AB2PQ58FF8 381 aa26.11■■□□□ 1.77
DDX54-208ENST00000551344 CAMKK2Q96RR4 588 aa26.11■■□□□ 1.77
DDX54-208ENST00000551344 INSRP06213 1382 aa26.1■■□□□ 1.77
DDX54-208ENST00000551344 FLT4P35916 1363 aa26.1■■□□□ 1.77
DDX54-208ENST00000551344 KIF7Q2M1P5 1343 aa26.1■■□□□ 1.77
DDX54-208ENST00000551344 EZH2Q15910 746 aaKnown RBP26.09■■□□□ 1.77
DDX54-208ENST00000551344 PEAK1Q9H792 1746 aa26.08■■□□□ 1.77
DDX54-208ENST00000551344 TNS2Q63HR2 1409 aa26.08■■□□□ 1.77
DDX54-208ENST00000551344 BCL11BQ9C0K0 894 aaPredicted RBP26.08■■□□□ 1.77
DDX54-208ENST00000551344 EMILIN1Q9Y6C2 1016 aa26.08■■□□□ 1.77
DDX54-208ENST00000551344 TNS1Q9HBL0 1735 aaKnown RBP26.08■■□□□ 1.76
DDX54-208ENST00000551344 PARD3Q8TEW0 1356 aa26.07■■□□□ 1.76
DDX54-208ENST00000551344 SMG6Q86US8 1419 aaKnown RBP26.07■■□□□ 1.76
DDX54-208ENST00000551344 FAM208AQ9UK61 1670 aaKnown RBP26.07■■□□□ 1.76
DDX54-208ENST00000551344 NBPF6Q5VWK0 638 aa26.07■■□□□ 1.76
DDX54-208ENST00000551344 NBPF4Q96M43 638 aa26.07■■□□□ 1.76
DDX54-208ENST00000551344 KNSTRNQ9Y448 316 aa26.07■■□□□ 1.76
DDX54-208ENST00000551344 NSD2O96028 1365 aa26.06■■□□□ 1.76
DDX54-208ENST00000551344 PPM1GO15355 546 aaPredicted RBP26.05■■□□□ 1.76
DDX54-208ENST00000551344 POLKQ9UBT6 870 aa26.05■■□□□ 1.76
DDX54-208ENST00000551344 WASHC2AQ641Q2 1341 aa26.05■■□□□ 1.76
DDX54-208ENST00000551344 PLSCR1O15162 318 aa26.03■■□□□ 1.76
DDX54-208ENST00000551344 TNNT2P45379 298 aaPredicted RBP26.01■■□□□ 1.75
DDX54-208ENST00000551344 ZCRB1Q8TBF4 217 aaKnown RBP26■■□□□ 1.75
DDX54-208ENST00000551344 PTF1AQ7RTS3 328 aa25.99■■□□□ 1.75
DDX54-208ENST00000551344 MORC1Q86VD1 984 aa25.99■■□□□ 1.75
DDX54-208ENST00000551344 DDX54Q8TDD1 881 aaKnown RBP25.99■■□□□ 1.75
DDX54-208ENST00000551344 RAPGEF4Q8WZA2 1011 aa25.99■■□□□ 1.75
DDX54-208ENST00000551344 SBF2Q86WG5 1849 aa25.99■■□□□ 1.75
DDX54-208ENST00000551344 USHBP1Q8N6Y0 703 aa25.98■■□□□ 1.75
DDX54-208ENST00000551344 MAP2P11137 1827 aaKnown RBP25.98■■□□□ 1.75
DDX54-208ENST00000551344 PER1O15534 1290 aaPredicted RBP25.96■■□□□ 1.75
DDX54-208ENST00000551344 KCNQ2O43526 872 aa25.96■■□□□ 1.75
DDX54-208ENST00000551344 TATP17735 454 aaPredicted RBP25.96■■□□□ 1.75
DDX54-208ENST00000551344 AMER1Q5JTC6 1135 aaPredicted RBP25.96■■□□□ 1.75
DDX54-208ENST00000551344 RGPD2P0DJD1 1756 aa25.96■■□□□ 1.75
DDX54-208ENST00000551344 ANKRD26Q9UPS8 1709 aa25.95■■□□□ 1.74
DDX54-208ENST00000551344 NBPF14Q5TI25 921 aa25.94■■□□□ 1.74
DDX54-208ENST00000551344 ACSBG1Q96GR2 724 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms