RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 KIF3CO14782 793 aa17.1■□□□□ 0.33
GPN3-208ENST00000550974 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
GPN3-208ENST00000550974 LMO7Q8WWI1 1683 aa17.1■□□□□ 0.33
GPN3-208ENST00000550974 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
GPN3-208ENST00000550974 ADCY9O60503 1353 aa17.09■□□□□ 0.33
GPN3-208ENST00000550974 EIF3AQ14152 1382 aaKnown RBP17.09■□□□□ 0.33
GPN3-208ENST00000550974 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
GPN3-208ENST00000550974 BCL9O00512 1426 aa17.08■□□□□ 0.32
GPN3-208ENST00000550974 CPDO75976 1380 aa17.08■□□□□ 0.32
GPN3-208ENST00000550974 ZBTB7CA1YPR0 619 aa17.08■□□□□ 0.32
GPN3-208ENST00000550974 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.32
GPN3-208ENST00000550974 SLC16A10Q8TF71 515 aa17.08■□□□□ 0.32
GPN3-208ENST00000550974 C14orf93Q9H972 538 aaKnown RBP17.08■□□□□ 0.32
GPN3-208ENST00000550974 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
GPN3-208ENST00000550974 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
GPN3-208ENST00000550974 TOPAZ1Q8N9V7 1692 aa17.06■□□□□ 0.32
GPN3-208ENST00000550974 WASLO00401 505 aaPredicted RBP17.05■□□□□ 0.32
GPN3-208ENST00000550974 ABTB2Q8N961 1025 aa17.05■□□□□ 0.32
GPN3-208ENST00000550974 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
GPN3-208ENST00000550974 PAPPAQ13219 1627 aa17.04■□□□□ 0.32
GPN3-208ENST00000550974 PCDH10Q9P2E7 1040 aa17.04■□□□□ 0.32
GPN3-208ENST00000550974 KLRG1Q96E93 195 aa17.03■□□□□ 0.32
GPN3-208ENST00000550974 WWC3Q9ULE0 1092 aa17.03■□□□□ 0.32
GPN3-208ENST00000550974 GCP02774 474 aa17.02■□□□□ 0.32
GPN3-208ENST00000550974 HTRA3P83110 453 aa17.02■□□□□ 0.32
GPN3-208ENST00000550974 JMYQ8N9B5 988 aa17.02■□□□□ 0.32
GPN3-208ENST00000550974 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.32
GPN3-208ENST00000550974 SPATA31E1Q6ZUB1 1445 aa17.02■□□□□ 0.31
GPN3-208ENST00000550974 CDCA7Q9BWT1 371 aaPredicted RBP17.01■□□□□ 0.31
GPN3-208ENST00000550974 LRRC4BQ9NT99 713 aa17.01■□□□□ 0.31
GPN3-208ENST00000550974 TRAK1Q9UPV9 953 aa17.01■□□□□ 0.31
GPN3-208ENST00000550974 AKAP12Q02952 1782 aa17.01■□□□□ 0.31
GPN3-208ENST00000550974 PNPLA7Q6ZV29 1317 aa17■□□□□ 0.31
GPN3-208ENST00000550974 EXOC5O00471 708 aa17■□□□□ 0.31
GPN3-208ENST00000550974 TOMM70O94826 608 aa17■□□□□ 0.31
GPN3-208ENST00000550974 AKT1S1Q96B36 256 aa17■□□□□ 0.31
GPN3-208ENST00000550974 NUDT16Q96DE0 195 aaKnown RBP16.99■□□□□ 0.31
GPN3-208ENST00000550974 USP19O94966 1318 aa16.98■□□□□ 0.31
GPN3-208ENST00000550974 TFCP2L1Q9NZI6 479 aa16.98■□□□□ 0.31
GPN3-208ENST00000550974 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
GPN3-208ENST00000550974 COL24A1Q17RW2 1714 aa16.96■□□□□ 0.31
GPN3-208ENST00000550974 ACEP12821 1306 aa16.96■□□□□ 0.3
GPN3-208ENST00000550974 BRD4O60885 1362 aaPredicted RBP16.95■□□□□ 0.3
GPN3-208ENST00000550974 WDR90Q96KV7 1748 aa16.95■□□□□ 0.3
GPN3-208ENST00000550974 WDR17Q8IZU2 1322 aa16.95■□□□□ 0.3
GPN3-208ENST00000550974 MSH5O43196 834 aa16.94■□□□□ 0.3
GPN3-208ENST00000550974 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
GPN3-208ENST00000550974 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
GPN3-208ENST00000550974 AXIN2Q9Y2T1 843 aa16.92■□□□□ 0.3
GPN3-208ENST00000550974 USP6P35125 1406 aa16.92■□□□□ 0.3
GPN3-208ENST00000550974 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
GPN3-208ENST00000550974 ITSN1Q15811 1721 aa16.91■□□□□ 0.3
GPN3-208ENST00000550974 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
GPN3-208ENST00000550974 CD2APQ9Y5K6 639 aa16.91■□□□□ 0.3
GPN3-208ENST00000550974 KCNQ4P56696 695 aa16.9■□□□□ 0.3
GPN3-208ENST00000550974 MSL1Q68DK7 614 aa16.9■□□□□ 0.3
GPN3-208ENST00000550974 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
GPN3-208ENST00000550974 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
GPN3-208ENST00000550974 QSER1Q2KHR3 1735 aa16.89■□□□□ 0.29
GPN3-208ENST00000550974 HSPA1AP0DMV8 641 aaKnown RBP16.88■□□□□ 0.29
GPN3-208ENST00000550974 HSPA1BP0DMV9 641 aaKnown RBP16.88■□□□□ 0.29
GPN3-208ENST00000550974 TNS2Q63HR2 1409 aa16.87■□□□□ 0.29
GPN3-208ENST00000550974 ARHGEF28Q8N1W1 1705 aaKnown RBP16.87■□□□□ 0.29
GPN3-208ENST00000550974 CDK19Q9BWU1 502 aa16.87■□□□□ 0.29
GPN3-208ENST00000550974 NMRK2Q9NPI5 230 aa16.87■□□□□ 0.29
GPN3-208ENST00000550974 BTAF1O14981 1849 aa16.86■□□□□ 0.29
GPN3-208ENST00000550974 RBM46Q8TBY0 533 aaKnown RBP16.86■□□□□ 0.29
GPN3-208ENST00000550974 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
GPN3-208ENST00000550974 PLEKHG3A1L390 1219 aa16.85■□□□□ 0.29
GPN3-208ENST00000550974 NLRP6P59044 892 aa16.85■□□□□ 0.29
GPN3-208ENST00000550974 COL23A1Q86Y22 540 aaPredicted RBP16.85■□□□□ 0.29
GPN3-208ENST00000550974 C16orf71Q8IYS4 520 aaPredicted RBP16.85■□□□□ 0.29
GPN3-208ENST00000550974 IGSF1Q8N6C5 1336 aa16.84■□□□□ 0.29
GPN3-208ENST00000550974 ADGRB1O14514 1584 aa16.84■□□□□ 0.29
GPN3-208ENST00000550974 TUBGCP6Q96RT7 1819 aa16.84■□□□□ 0.29
GPN3-208ENST00000550974 COL18A1P39060 1754 aa16.82■□□□□ 0.28
GPN3-208ENST00000550974 CCDC7Q96M83 1385 aa16.81■□□□□ 0.28
GPN3-208ENST00000550974 FSTL1Q12841 308 aa16.81■□□□□ 0.28
GPN3-208ENST00000550974 PPIP5K1Q6PFW1 1433 aa16.8■□□□□ 0.28
GPN3-208ENST00000550974 SLIT3O75094 1523 aa16.79■□□□□ 0.28
GPN3-208ENST00000550974 ABCC6O95255 1503 aa16.79■□□□□ 0.28
GPN3-208ENST00000550974 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
GPN3-208ENST00000550974 SOX12O15370 315 aa16.78■□□□□ 0.28
GPN3-208ENST00000550974 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
GPN3-208ENST00000550974 FAM161AQ3B820 660 aa16.77■□□□□ 0.28
GPN3-208ENST00000550974 ARHGEF25Q86VW2 580 aa16.77■□□□□ 0.28
GPN3-208ENST00000550974 SYTL4Q96C24 671 aaPredicted RBP16.76■□□□□ 0.27
GPN3-208ENST00000550974 PPARGC1BQ86YN6 1023 aaKnown RBP16.75■□□□□ 0.27
GPN3-208ENST00000550974 MPHOSPH9Q99550 1183 aa16.75■□□□□ 0.27
GPN3-208ENST00000550974 CCNL1Q9UK58 526 aaPredicted RBP16.75■□□□□ 0.27
GPN3-208ENST00000550974 PCNTO95613 3336 aa16.74■□□□□ 0.27
GPN3-208ENST00000550974 IL2RBP14784 551 aa16.74■□□□□ 0.27
GPN3-208ENST00000550974 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
GPN3-208ENST00000550974 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
GPN3-208ENST00000550974 NLRP2Q9NX02 1062 aa16.72■□□□□ 0.27
GPN3-208ENST00000550974 KAT6BQ8WYB5 2073 aa16.71■□□□□ 0.27
GPN3-208ENST00000550974 PRIM1P49642 420 aaKnown RBP16.71■□□□□ 0.27
GPN3-208ENST00000550974 KCNH5Q8NCM2 988 aa16.71■□□□□ 0.27
GPN3-208ENST00000550974 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
GPN3-208ENST00000550974 CICQ96RK0 1608 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms