RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 BANK1Q8NDB2 785 aa9.26□□□□□ -0.93
SCAF11-214ENST00000550893 GJD4Q96KN9 370 aaPredicted RBP9.26□□□□□ -0.93
SCAF11-214ENST00000550893 OCSTAMPQ9BR26 566 aa9.26□□□□□ -0.93
SCAF11-214ENST00000550893 ERFEQ4G0M1 354 aa9.25□□□□□ -0.93
SCAF11-214ENST00000550893 TRMT44Q8IYL2 757 aaKnown RBP9.25□□□□□ -0.93
SCAF11-214ENST00000550893 PNMA1Q8ND90 353 aa9.25□□□□□ -0.93
SCAF11-214ENST00000550893 GRM5P41594 1212 aa9.24□□□□□ -0.93
SCAF11-214ENST00000550893 PTK2Q05397 1052 aa9.24□□□□□ -0.93
SCAF11-214ENST00000550893 ZBTB33Q86T24 672 aa9.24□□□□□ -0.93
SCAF11-214ENST00000550893 SNRKQ9NRH2 765 aa9.24□□□□□ -0.93
SCAF11-214ENST00000550893 WDR62O43379 1518 aa9.24□□□□□ -0.93
SCAF11-214ENST00000550893 VASH1Q7L8A9 365 aaPredicted RBP9.23□□□□□ -0.93
SCAF11-214ENST00000550893 GPSM3Q9Y4H4 160 aa9.23□□□□□ -0.93
SCAF11-214ENST00000550893 CFTRP13569 1480 aa9.22□□□□□ -0.93
SCAF11-214ENST00000550893 ERCC6Q03468 1493 aa9.22□□□□□ -0.93
SCAF11-214ENST00000550893 CAPN5O15484 640 aaPredicted RBP9.22□□□□□ -0.93
SCAF11-214ENST00000550893 NR3C2P08235 984 aa9.22□□□□□ -0.93
SCAF11-214ENST00000550893 NR5A1Q13285 461 aa9.22□□□□□ -0.93
SCAF11-214ENST00000550893 MTMR14Q8NCE2 650 aa9.22□□□□□ -0.93
SCAF11-214ENST00000550893 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
SCAF11-214ENST00000550893 ADAM32Q8TC27 787 aa9.21□□□□□ -0.94
SCAF11-214ENST00000550893 ATP13A2Q9NQ11 1180 aa9.21□□□□□ -0.94
SCAF11-214ENST00000550893 GMPR2Q9P2T1 348 aaKnown RBP9.21□□□□□ -0.94
SCAF11-214ENST00000550893 CADPSQ9ULU8 1353 aa9.21□□□□□ -0.94
SCAF11-214ENST00000550893 TIMP2P16035 220 aa9.2□□□□□ -0.94
SCAF11-214ENST00000550893 FSHRP23945 695 aa9.2□□□□□ -0.94
SCAF11-214ENST00000550893 KLF16Q9BXK1 252 aaPredicted RBP9.2□□□□□ -0.94
SCAF11-214ENST00000550893 SOCS7O14512 581 aa9.19□□□□□ -0.94
SCAF11-214ENST00000550893 WDR4P57081 412 aaKnown RBP9.19□□□□□ -0.94
SCAF11-214ENST00000550893 SLC10A4Q96EP9 437 aa9.19□□□□□ -0.94
SCAF11-214ENST00000550893 CCDC88BA6NC98 1476 aa9.19□□□□□ -0.94
SCAF11-214ENST00000550893 MRC2Q9UBG0 1479 aa9.17□□□□□ -0.94
SCAF11-214ENST00000550893 GPR37L1O60883 481 aa9.17□□□□□ -0.94
SCAF11-214ENST00000550893 BMP1P13497 986 aa9.17□□□□□ -0.94
SCAF11-214ENST00000550893 ITPKCQ96DU7 683 aa9.17□□□□□ -0.94
SCAF11-214ENST00000550893 URB2Q14146 1524 aaKnown RBP9.16□□□□□ -0.94
SCAF11-214ENST00000550893 ZBBXA8MT70 800 aa9.16□□□□□ -0.94
SCAF11-214ENST00000550893 ZIC2O95409 532 aaPredicted RBP9.16□□□□□ -0.94
SCAF11-214ENST00000550893 TRIM46Q7Z4K8 759 aa9.16□□□□□ -0.94
SCAF11-214ENST00000550893 KCTD15Q96SI1 283 aaPredicted RBP9.16□□□□□ -0.94
SCAF11-214ENST00000550893 ZFAND3Q9H8U3 227 aa9.16□□□□□ -0.94
SCAF11-214ENST00000550893 CDV3Q9UKY7 258 aaKnown RBP9.16□□□□□ -0.94
SCAF11-214ENST00000550893 NDUFB9Q9Y6M9 179 aa9.16□□□□□ -0.94
SCAF11-214ENST00000550893 C11orf95C9JLR9 678 aaPredicted RBP9.15□□□□□ -0.94
SCAF11-214ENST00000550893 FBXO45P0C2W1 286 aa9.15□□□□□ -0.94
SCAF11-214ENST00000550893 CCDC116Q8IYX3 515 aa9.15□□□□□ -0.94
SCAF11-214ENST00000550893 FANCD2Q9BXW9 1451 aa9.15□□□□□ -0.95
SCAF11-214ENST00000550893 APBB1O00213 710 aa9.14□□□□□ -0.95
SCAF11-214ENST00000550893 DZIP3Q86Y13 1208 aaKnown RBP9.14□□□□□ -0.95
SCAF11-214ENST00000550893 PDS5BQ9NTI5 1447 aa9.14□□□□□ -0.95
SCAF11-214ENST00000550893 SNRPBP14678 240 aaKnown RBP9.13□□□□□ -0.95
SCAF11-214ENST00000550893 SENP2Q9HC62 589 aa9.13□□□□□ -0.95
SCAF11-214ENST00000550893 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
SCAF11-214ENST00000550893 INTS6LQ5JSJ4 861 aaKnown RBP9.12□□□□□ -0.95
SCAF11-214ENST00000550893 PPP1R26Q5T8A7 1209 aaPredicted RBP9.12□□□□□ -0.95
SCAF11-214ENST00000550893 TRIM47Q96LD4 638 aa9.12□□□□□ -0.95
SCAF11-214ENST00000550893 TBC1D2BQ9UPU7 963 aa9.12□□□□□ -0.95
SCAF11-214ENST00000550893 EMILIN1Q9Y6C2 1016 aa9.12□□□□□ -0.95
SCAF11-214ENST00000550893 NR1H3Q13133 447 aa9.11□□□□□ -0.95
SCAF11-214ENST00000550893 NBPF20Q3BBV1 942 aa9.11□□□□□ -0.95
SCAF11-214ENST00000550893 MRPL14Q6P1L8 145 aaKnown RBP9.11□□□□□ -0.95
SCAF11-214ENST00000550893 TREML4Q6UXN2 200 aa9.1□□□□□ -0.95
SCAF11-214ENST00000550893 KIFC2Q96AC6 838 aa9.1□□□□□ -0.95
SCAF11-214ENST00000550893 ZFP42Q96MM3 310 aa9.1□□□□□ -0.95
SCAF11-214ENST00000550893 PCDHB9Q9Y5E1 797 aa9.1□□□□□ -0.95
SCAF11-214ENST00000550893 ESPNB1AK53 854 aa9.09□□□□□ -0.95
SCAF11-214ENST00000550893 RAB15P59190 212 aa9.09□□□□□ -0.95
SCAF11-214ENST00000550893 PURBQ96QR8 312 aaKnown RBP9.09□□□□□ -0.95
SCAF11-214ENST00000550893 DHX9Q08211 1270 aaKnown RBP9.08□□□□□ -0.96
SCAF11-214ENST00000550893 SCARF1Q14162 830 aa9.08□□□□□ -0.96
SCAF11-214ENST00000550893 MCM6Q14566 821 aa9.08□□□□□ -0.96
SCAF11-214ENST00000550893 TMEM132AQ24JP5 1023 aa9.08□□□□□ -0.96
SCAF11-214ENST00000550893 MEIOBQ8N635 442 aa9.08□□□□□ -0.96
SCAF11-214ENST00000550893 PRM3Q9NNZ6 103 aa9.08□□□□□ -0.96
SCAF11-214ENST00000550893 PGPEP1Q9NXJ5 209 aa9.08□□□□□ -0.96
SCAF11-214ENST00000550893 TMPRSS4Q9NRS4 437 aa9.07□□□□□ -0.96
SCAF11-214ENST00000550893 TARBP1Q13395 1621 aaKnown RBP9.06□□□□□ -0.96
SCAF11-214ENST00000550893 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
SCAF11-214ENST00000550893 GIGYF1O75420 1035 aaPredicted RBP9.06□□□□□ -0.96
SCAF11-214ENST00000550893 CBLBQ13191 982 aa9.06□□□□□ -0.96
SCAF11-214ENST00000550893 IRF5Q13568 498 aa9.06□□□□□ -0.96
SCAF11-214ENST00000550893 C6orf118Q5T5N4 469 aa9.06□□□□□ -0.96
SCAF11-214ENST00000550893 GDPD2Q9HCC8 539 aa9.06□□□□□ -0.96
SCAF11-214ENST00000550893 LINC00528Q8N1L1 170 aa9.05□□□□□ -0.96
SCAF11-214ENST00000550893 ZNF330Q9Y3S2 320 aaPredicted RBP9.05□□□□□ -0.96
SCAF11-214ENST00000550893 WDR97A6NE52 1622 aa9.05□□□□□ -0.96
SCAF11-214ENST00000550893 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
SCAF11-214ENST00000550893 DNMBPQ6XZF7 1577 aa9.04□□□□□ -0.96
SCAF11-214ENST00000550893 Q6ZVU0 165 aa9.04□□□□□ -0.96
SCAF11-214ENST00000550893 SEPT12Q8IYM1 358 aa9.04□□□□□ -0.96
SCAF11-214ENST00000550893 ZNF784Q8NCA9 323 aaPredicted RBP9.04□□□□□ -0.96
SCAF11-214ENST00000550893 UPP2O95045 317 aa9.03□□□□□ -0.96
SCAF11-214ENST00000550893 BMP2P12643 396 aa9.03□□□□□ -0.96
SCAF11-214ENST00000550893 ABL2P42684 1182 aa9.03□□□□□ -0.96
SCAF11-214ENST00000550893 MCCD1P59942 119 aaPredicted RBP9.03□□□□□ -0.96
SCAF11-214ENST00000550893 TSEN34Q9BSV6 310 aaKnown RBP9.02□□□□□ -0.97
SCAF11-214ENST00000550893 EIF4G3O43432 1585 aaKnown RBP9.02□□□□□ -0.97
SCAF11-214ENST00000550893 ZNF608Q9ULD9 1512 aaPredicted RBP9.01□□□□□ -0.97
SCAF11-214ENST00000550893 ADD1P35611 737 aaKnown RBP9.01□□□□□ -0.97
SCAF11-214ENST00000550893 ZNF592Q92610 1267 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms