RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 NPC1L1Q9UHC9 1359 aa16.59■□□□□ 0.25
ERBB3-216ENST00000550869 USP6P35125 1406 aa16.59■□□□□ 0.25
ERBB3-216ENST00000550869 GCP02774 474 aa16.58■□□□□ 0.24
ERBB3-216ENST00000550869 FAM182BQ5T319 152 aa16.58■□□□□ 0.24
ERBB3-216ENST00000550869 TCP11L2Q8N4U5 519 aa16.58■□□□□ 0.24
ERBB3-216ENST00000550869 TERF2IPQ9NYB0 399 aa16.58■□□□□ 0.24
ERBB3-216ENST00000550869 A0A1W2PP64 1363 aa16.58■□□□□ 0.24
ERBB3-216ENST00000550869 AKAP12Q02952 1782 aa16.58■□□□□ 0.24
ERBB3-216ENST00000550869 SLIT3O75094 1523 aa16.57■□□□□ 0.24
ERBB3-216ENST00000550869 COL5A2P05997 1499 aaPredicted RBP16.57■□□□□ 0.24
ERBB3-216ENST00000550869 PDE3BQ13370 1112 aa16.57■□□□□ 0.24
ERBB3-216ENST00000550869 AMER1Q5JTC6 1135 aaPredicted RBP16.57■□□□□ 0.24
ERBB3-216ENST00000550869 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
ERBB3-216ENST00000550869 RREB1Q92766 1687 aa16.56■□□□□ 0.24
ERBB3-216ENST00000550869 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
ERBB3-216ENST00000550869 USP35Q9P2H5 1018 aa16.56■□□□□ 0.24
ERBB3-216ENST00000550869 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
ERBB3-216ENST00000550869 TRIM37O94972 964 aa16.55■□□□□ 0.24
ERBB3-216ENST00000550869 MON2Q7Z3U7 1717 aa16.55■□□□□ 0.24
ERBB3-216ENST00000550869 PIK3C2AO00443 1686 aa16.55■□□□□ 0.24
ERBB3-216ENST00000550869 CRB1P82279 1406 aa16.54■□□□□ 0.24
ERBB3-216ENST00000550869 AATKQ6ZMQ8 1374 aa16.54■□□□□ 0.24
ERBB3-216ENST00000550869 HDGFL2Q7Z4V5 671 aaPredicted RBP16.54■□□□□ 0.24
ERBB3-216ENST00000550869 CAMKK2Q96RR4 588 aa16.54■□□□□ 0.24
ERBB3-216ENST00000550869 EZH2Q15910 746 aaKnown RBP16.53■□□□□ 0.24
ERBB3-216ENST00000550869 KNSTRNQ9Y448 316 aa16.53■□□□□ 0.24
ERBB3-216ENST00000550869 NSD3Q9BZ95 1437 aa16.53■□□□□ 0.24
ERBB3-216ENST00000550869 RGPD3A6NKT7 1758 aaPredicted RBP16.52■□□□□ 0.24
ERBB3-216ENST00000550869 RGPD4Q7Z3J3 1758 aa16.52■□□□□ 0.24
ERBB3-216ENST00000550869 APBA3O96018 575 aa16.52■□□□□ 0.24
ERBB3-216ENST00000550869 NLRP6P59044 892 aa16.52■□□□□ 0.24
ERBB3-216ENST00000550869 NUP188Q5SRE5 1749 aa16.52■□□□□ 0.24
ERBB3-216ENST00000550869 EDC4Q6P2E9 1401 aaKnown RBP16.52■□□□□ 0.23
ERBB3-216ENST00000550869 COL18A1P39060 1754 aa16.51■□□□□ 0.23
ERBB3-216ENST00000550869 R3HDM1Q15032 1099 aaKnown RBP16.51■□□□□ 0.23
ERBB3-216ENST00000550869 PRKRIP1Q9H875 184 aaPredicted RBP16.51■□□□□ 0.23
ERBB3-216ENST00000550869 WNK3Q9BYP7 1800 aa16.51■□□□□ 0.23
ERBB3-216ENST00000550869 KTN1Q86UP2 1357 aaKnown RBP16.51■□□□□ 0.23
ERBB3-216ENST00000550869 PEAK1Q9H792 1746 aa16.5■□□□□ 0.23
ERBB3-216ENST00000550869 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
ERBB3-216ENST00000550869 ANP32CO43423 234 aa16.5■□□□□ 0.23
ERBB3-216ENST00000550869 OVOS2A0A0G2JMS6 1433 aa16.5■□□□□ 0.23
ERBB3-216ENST00000550869 OVOS2A0A0J9YW53 1432 aa16.5■□□□□ 0.23
ERBB3-216ENST00000550869 OVOS2Q6IE36 1432 aa16.5■□□□□ 0.23
ERBB3-216ENST00000550869 MIER1Q8N108 512 aa16.49■□□□□ 0.23
ERBB3-216ENST00000550869 ABCC6O95255 1503 aa16.49■□□□□ 0.23
ERBB3-216ENST00000550869 NSD2O96028 1365 aa16.49■□□□□ 0.23
ERBB3-216ENST00000550869 CGNL1Q0VF96 1302 aa16.48■□□□□ 0.23
ERBB3-216ENST00000550869 TTC21AQ8NDW8 1320 aa16.48■□□□□ 0.23
ERBB3-216ENST00000550869 SBF2Q86WG5 1849 aa16.48■□□□□ 0.23
ERBB3-216ENST00000550869 FYB1O15117 783 aa16.48■□□□□ 0.23
ERBB3-216ENST00000550869 KCNH5Q8NCM2 988 aa16.48■□□□□ 0.23
ERBB3-216ENST00000550869 RALBP1Q15311 655 aa16.47■□□□□ 0.23
ERBB3-216ENST00000550869 NBPF14Q5TI25 921 aa16.47■□□□□ 0.23
ERBB3-216ENST00000550869 CDCA7Q9BWT1 371 aaPredicted RBP16.47■□□□□ 0.23
ERBB3-216ENST00000550869 TTC21BQ7Z4L5 1316 aa16.46■□□□□ 0.23
ERBB3-216ENST00000550869 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
ERBB3-216ENST00000550869 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
ERBB3-216ENST00000550869 DDB1Q16531 1140 aa16.45■□□□□ 0.22
ERBB3-216ENST00000550869 TOM1L2Q6ZVM7 507 aa16.45■□□□□ 0.22
ERBB3-216ENST00000550869 BCL9O00512 1426 aa16.45■□□□□ 0.22
ERBB3-216ENST00000550869 RGPD5Q99666 1765 aa16.44■□□□□ 0.22
ERBB3-216ENST00000550869 ZBTB7CA1YPR0 619 aa16.44■□□□□ 0.22
ERBB3-216ENST00000550869 CC2D1BQ5T0F9 858 aaKnown RBP16.44■□□□□ 0.22
ERBB3-216ENST00000550869 ARHGEF25Q86VW2 580 aa16.44■□□□□ 0.22
ERBB3-216ENST00000550869 KIF20BQ96Q89 1820 aa16.44■□□□□ 0.22
ERBB3-216ENST00000550869 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
ERBB3-216ENST00000550869 NFAT5O94916 1531 aa16.44■□□□□ 0.22
ERBB3-216ENST00000550869 USP31Q70CQ4 1352 aa16.43■□□□□ 0.22
ERBB3-216ENST00000550869 PLSCR1O15162 318 aa16.42■□□□□ 0.22
ERBB3-216ENST00000550869 CCER2I3L3R5 266 aa16.41■□□□□ 0.22
ERBB3-216ENST00000550869 NME9Q86XW9 330 aa16.41■□□□□ 0.22
ERBB3-216ENST00000550869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.41■□□□□ 0.22
ERBB3-216ENST00000550869 AXIN2Q9Y2T1 843 aa16.41■□□□□ 0.22
ERBB3-216ENST00000550869 CARD10Q9BWT7 1032 aa16.4■□□□□ 0.22
ERBB3-216ENST00000550869 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
ERBB3-216ENST00000550869 GGNBP2Q9H3C7 697 aa16.4■□□□□ 0.22
ERBB3-216ENST00000550869 MYBBP1AQ9BQG0 1328 aaKnown RBP16.39■□□□□ 0.21
ERBB3-216ENST00000550869 CSB-PGBD3P0DP91 1061 aa16.38■□□□□ 0.21
ERBB3-216ENST00000550869 LTN1O94822 1766 aa16.38■□□□□ 0.21
ERBB3-216ENST00000550869 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
ERBB3-216ENST00000550869 MORC1Q86VD1 984 aa16.37■□□□□ 0.21
ERBB3-216ENST00000550869 MARCH10Q8NA82 808 aaPredicted RBP16.36■□□□□ 0.21
ERBB3-216ENST00000550869 TNS2Q63HR2 1409 aa16.36■□□□□ 0.21
ERBB3-216ENST00000550869 SOX12O15370 315 aa16.35■□□□□ 0.21
ERBB3-216ENST00000550869 COG3Q96JB2 828 aa16.35■□□□□ 0.21
ERBB3-216ENST00000550869 SPON1Q9HCB6 807 aa16.35■□□□□ 0.21
ERBB3-216ENST00000550869 CASZ1Q86V15 1759 aa16.35■□□□□ 0.21
ERBB3-216ENST00000550869 EXOC5O00471 708 aa16.34■□□□□ 0.21
ERBB3-216ENST00000550869 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
ERBB3-216ENST00000550869 KCNQ2O43526 872 aa16.33■□□□□ 0.2
ERBB3-216ENST00000550869 CNGB1Q14028 1251 aaPredicted RBP16.33■□□□□ 0.2
ERBB3-216ENST00000550869 CCDC184Q52MB2 194 aa16.33■□□□□ 0.2
ERBB3-216ENST00000550869 ERBB3P21860 1342 aa16.33■□□□□ 0.2
ERBB3-216ENST00000550869 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
ERBB3-216ENST00000550869 PPP1R1BQ9UD71 204 aaPredicted RBP16.32■□□□□ 0.2
ERBB3-216ENST00000550869 FAM208AQ9UK61 1670 aaKnown RBP16.32■□□□□ 0.2
ERBB3-216ENST00000550869 SMG6Q86US8 1419 aaKnown RBP16.3■□□□□ 0.2
ERBB3-216ENST00000550869 INSRP06213 1382 aa16.3■□□□□ 0.2
ERBB3-216ENST00000550869 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms