RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 NDUFB9Q9Y6M9 179 aa9.23□□□□□ -0.93
RAB3IP-214ENST00000550847 ZBBXA8MT70 800 aa9.22□□□□□ -0.93
RAB3IP-214ENST00000550847 MCM6Q14566 821 aa9.22□□□□□ -0.93
RAB3IP-214ENST00000550847 KCTD15Q96SI1 283 aaPredicted RBP9.22□□□□□ -0.93
RAB3IP-214ENST00000550847 SNRPBP14678 240 aaKnown RBP9.21□□□□□ -0.94
RAB3IP-214ENST00000550847 INTS6LQ5JSJ4 861 aaKnown RBP9.21□□□□□ -0.94
RAB3IP-214ENST00000550847 CCDC116Q8IYX3 515 aa9.2□□□□□ -0.94
RAB3IP-214ENST00000550847 IRF5Q13568 498 aa9.19□□□□□ -0.94
RAB3IP-214ENST00000550847 PPP1R26Q5T8A7 1209 aaPredicted RBP9.19□□□□□ -0.94
RAB3IP-214ENST00000550847 C11orf95C9JLR9 678 aaPredicted RBP9.18□□□□□ -0.94
RAB3IP-214ENST00000550847 DZIP3Q86Y13 1208 aaKnown RBP9.18□□□□□ -0.94
RAB3IP-214ENST00000550847 TRIM47Q96LD4 638 aa9.18□□□□□ -0.94
RAB3IP-214ENST00000550847 ESPNB1AK53 854 aa9.17□□□□□ -0.94
RAB3IP-214ENST00000550847 NR1H3Q13133 447 aa9.17□□□□□ -0.94
RAB3IP-214ENST00000550847 MRPL14Q6P1L8 145 aaKnown RBP9.17□□□□□ -0.94
RAB3IP-214ENST00000550847 CDV3Q9UKY7 258 aaKnown RBP9.17□□□□□ -0.94
RAB3IP-214ENST00000550847 RAB15P59190 212 aa9.16□□□□□ -0.94
RAB3IP-214ENST00000550847 CBLBQ13191 982 aa9.16□□□□□ -0.94
RAB3IP-214ENST00000550847 TMEM132AQ24JP5 1023 aa9.16□□□□□ -0.94
RAB3IP-214ENST00000550847 ZNF775Q96BV0 537 aaPredicted RBP9.16□□□□□ -0.94
RAB3IP-214ENST00000550847 ZFP42Q96MM3 310 aa9.16□□□□□ -0.94
RAB3IP-214ENST00000550847 PURBQ96QR8 312 aaKnown RBP9.16□□□□□ -0.94
RAB3IP-214ENST00000550847 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
RAB3IP-214ENST00000550847 TMPRSS4Q9NRS4 437 aa9.16□□□□□ -0.94
RAB3IP-214ENST00000550847 PCDHB9Q9Y5E1 797 aa9.16□□□□□ -0.94
RAB3IP-214ENST00000550847 GIGYF1O75420 1035 aaPredicted RBP9.15□□□□□ -0.94
RAB3IP-214ENST00000550847 NBPF20Q3BBV1 942 aa9.15□□□□□ -0.94
RAB3IP-214ENST00000550847 MEIOBQ8N635 442 aa9.15□□□□□ -0.94
RAB3IP-214ENST00000550847 EMILIN1Q9Y6C2 1016 aa9.15□□□□□ -0.94
RAB3IP-214ENST00000550847 APBB1O00213 710 aa9.14□□□□□ -0.95
RAB3IP-214ENST00000550847 ERVH48-1M5A8F1 160 aa9.13□□□□□ -0.95
RAB3IP-214ENST00000550847 ZNF784Q8NCA9 323 aaPredicted RBP9.13□□□□□ -0.95
RAB3IP-214ENST00000550847 POM121Q96HA1 1249 aa9.13□□□□□ -0.95
RAB3IP-214ENST00000550847 SENP2Q9HC62 589 aa9.13□□□□□ -0.95
RAB3IP-214ENST00000550847 C6orf118Q5T5N4 469 aa9.12□□□□□ -0.95
RAB3IP-214ENST00000550847 LINC00528Q8N1L1 170 aa9.12□□□□□ -0.95
RAB3IP-214ENST00000550847 LILRA1O75019 489 aa9.11□□□□□ -0.95
RAB3IP-214ENST00000550847 ABL2P42684 1182 aa9.11□□□□□ -0.95
RAB3IP-214ENST00000550847 VAC14Q08AM6 782 aa9.11□□□□□ -0.95
RAB3IP-214ENST00000550847 Q6ZVU0 165 aa9.11□□□□□ -0.95
RAB3IP-214ENST00000550847 COG6Q9Y2V7 657 aa9.11□□□□□ -0.95
RAB3IP-214ENST00000550847 SOBPA7XYQ1 873 aa9.1□□□□□ -0.95
RAB3IP-214ENST00000550847 ADD1P35611 737 aaKnown RBP9.1□□□□□ -0.95
RAB3IP-214ENST00000550847 DHX9Q08211 1270 aaKnown RBP9.1□□□□□ -0.95
RAB3IP-214ENST00000550847 KIFC2Q96AC6 838 aa9.1□□□□□ -0.95
RAB3IP-214ENST00000550847 AGBL1Q96MI9 1066 aa9.1□□□□□ -0.95
RAB3IP-214ENST00000550847 PGPEP1Q9NXJ5 209 aa9.1□□□□□ -0.95
RAB3IP-214ENST00000550847 TIMELESSQ9UNS1 1208 aa9.09□□□□□ -0.95
RAB3IP-214ENST00000550847 SCARF1Q14162 830 aa9.08□□□□□ -0.96
RAB3IP-214ENST00000550847 KDF1Q8NAX2 398 aaPredicted RBP9.08□□□□□ -0.96
RAB3IP-214ENST00000550847 CYLDQ9NQC7 956 aa9.08□□□□□ -0.96
RAB3IP-214ENST00000550847 BMP2P12643 396 aa9.07□□□□□ -0.96
RAB3IP-214ENST00000550847 LCE2CQ5TA81 110 aa9.07□□□□□ -0.96
RAB3IP-214ENST00000550847 SEPT12Q8IYM1 358 aa9.07□□□□□ -0.96
RAB3IP-214ENST00000550847 LCE2AQ5TA79 106 aaPredicted RBP9.06□□□□□ -0.96
RAB3IP-214ENST00000550847 TSEN34Q9BSV6 310 aaKnown RBP9.06□□□□□ -0.96
RAB3IP-214ENST00000550847 SCTRP47872 440 aa9.05□□□□□ -0.96
RAB3IP-214ENST00000550847 PRM3Q9NNZ6 103 aa9.05□□□□□ -0.96
RAB3IP-214ENST00000550847 CEP126Q9P2H0 1117 aa9.05□□□□□ -0.96
RAB3IP-214ENST00000550847 SOS2Q07890 1332 aaPredicted RBP9.05□□□□□ -0.96
RAB3IP-214ENST00000550847 RELBQ01201 579 aa9.04□□□□□ -0.96
RAB3IP-214ENST00000550847 TSGA10IPQ3SY00 556 aa9.04□□□□□ -0.96
RAB3IP-214ENST00000550847 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
RAB3IP-214ENST00000550847 DNMT3LQ9UJW3 386 aa9.04□□□□□ -0.96
RAB3IP-214ENST00000550847 SPINT1O43278 529 aa9.03□□□□□ -0.96
RAB3IP-214ENST00000550847 ADH1AP07327 375 aa9.03□□□□□ -0.96
RAB3IP-214ENST00000550847 NFX1Q12986 1120 aaKnown RBP9.03□□□□□ -0.96
RAB3IP-214ENST00000550847 ZNF330Q9Y3S2 320 aaPredicted RBP9.03□□□□□ -0.96
RAB3IP-214ENST00000550847 UPP2O95045 317 aa9.02□□□□□ -0.97
RAB3IP-214ENST00000550847 MCCD1P59942 119 aaPredicted RBP9.02□□□□□ -0.97
RAB3IP-214ENST00000550847 ERVK-9P63128 1117 aa9.02□□□□□ -0.97
RAB3IP-214ENST00000550847 FLIIQ13045 1269 aa9.02□□□□□ -0.97
RAB3IP-214ENST00000550847 PHTF2Q8N3S3 785 aa9.02□□□□□ -0.97
RAB3IP-214ENST00000550847 CDCA7Q9BWT1 371 aaPredicted RBP9.02□□□□□ -0.97
RAB3IP-214ENST00000550847 ZNF395Q9H8N7 513 aaPredicted RBP9.02□□□□□ -0.97
RAB3IP-214ENST00000550847 PCDHB11Q9Y5F2 797 aa9.02□□□□□ -0.97
RAB3IP-214ENST00000550847 CTSOP43234 321 aaPredicted RBP9.01□□□□□ -0.97
RAB3IP-214ENST00000550847 VEGFBP49765 207 aa9.01□□□□□ -0.97
RAB3IP-214ENST00000550847 EIF4G2P78344 907 aaKnown RBP eCLIP9.01□□□□□ -0.97
RAB3IP-214ENST00000550847 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
RAB3IP-214ENST00000550847 UBTFP17480 764 aaKnown RBP9□□□□□ -0.97
RAB3IP-214ENST00000550847 ERICH6Q7L0X2 663 aa9□□□□□ -0.97
RAB3IP-214ENST00000550847 ARXQ96QS3 562 aa9□□□□□ -0.97
RAB3IP-214ENST00000550847 GTF3C3Q9Y5Q9 886 aa9□□□□□ -0.97
RAB3IP-214ENST00000550847 POM121CA8CG34 1229 aa8.99□□□□□ -0.97
RAB3IP-214ENST00000550847 TERTO14746 1132 aaKnown RBP8.99□□□□□ -0.97
RAB3IP-214ENST00000550847 MAN1A2O60476 641 aa8.99□□□□□ -0.97
RAB3IP-214ENST00000550847 WASHC4Q2M389 1173 aa8.99□□□□□ -0.97
RAB3IP-214ENST00000550847 RNF20Q5VTR2 975 aa8.99□□□□□ -0.97
RAB3IP-214ENST00000550847 TREML4Q6UXN2 200 aa8.99□□□□□ -0.97
RAB3IP-214ENST00000550847 CLUAP1Q96AJ1 413 aa8.99□□□□□ -0.97
RAB3IP-214ENST00000550847 FIGNL2A6NMB9 653 aa8.98□□□□□ -0.97
RAB3IP-214ENST00000550847 TTLL8A6PVC2 850 aa8.98□□□□□ -0.97
RAB3IP-214ENST00000550847 PTGIRP43119 386 aa8.98□□□□□ -0.97
RAB3IP-214ENST00000550847 FOXD4L5Q5VV16 416 aaPredicted RBP8.98□□□□□ -0.97
RAB3IP-214ENST00000550847 CC2D2BQ6DHV5 1058 aa8.98□□□□□ -0.97
RAB3IP-214ENST00000550847 OSBPL3Q9H4L5 887 aa8.98□□□□□ -0.97
RAB3IP-214ENST00000550847 PIK3CDO00329 1044 aa8.97□□□□□ -0.97
RAB3IP-214ENST00000550847 TRAK2O60296 914 aa8.97□□□□□ -0.97
RAB3IP-214ENST00000550847 ADAMTS19Q8TE59 1207 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms