RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 WNK3Q9BYP7 1800 aa21.76■■□□□ 1.07
SVOP-203ENST00000550436 SOX12O15370 315 aa21.75■■□□□ 1.07
SVOP-203ENST00000550436 PLSCR1O15162 318 aa21.74■■□□□ 1.07
SVOP-203ENST00000550436 CASZ1Q86V15 1759 aa21.74■■□□□ 1.07
SVOP-203ENST00000550436 BRD4O60885 1362 aaPredicted RBP21.74■■□□□ 1.07
SVOP-203ENST00000550436 RGPD3A6NKT7 1758 aaPredicted RBP21.72■■□□□ 1.07
SVOP-203ENST00000550436 RGPD4Q7Z3J3 1758 aa21.72■■□□□ 1.07
SVOP-203ENST00000550436 BCL11BQ9C0K0 894 aaPredicted RBP21.72■■□□□ 1.07
SVOP-203ENST00000550436 WDR17Q8IZU2 1322 aa21.72■■□□□ 1.07
SVOP-203ENST00000550436 ARHGEF25Q86VW2 580 aa21.71■■□□□ 1.07
SVOP-203ENST00000550436 L3MBTL2Q969R5 705 aa21.71■■□□□ 1.07
SVOP-203ENST00000550436 AKAP12Q02952 1782 aa21.7■■□□□ 1.06
SVOP-203ENST00000550436 ZBTB7AO95365 584 aa21.7■■□□□ 1.06
SVOP-203ENST00000550436 TTC21BQ7Z4L5 1316 aa21.7■■□□□ 1.06
SVOP-203ENST00000550436 CPSF1Q10570 1443 aaKnown RBP21.7■■□□□ 1.06
SVOP-203ENST00000550436 C11orf95C9JLR9 678 aaPredicted RBP21.69■■□□□ 1.06
SVOP-203ENST00000550436 NINLQ9Y2I6 1382 aa21.69■■□□□ 1.06
SVOP-203ENST00000550436 ATF5Q9Y2D1 282 aaPredicted RBP21.68■■□□□ 1.06
SVOP-203ENST00000550436 CSB-PGBD3P0DP91 1061 aa21.67■■□□□ 1.06
SVOP-203ENST00000550436 EVC2Q86UK5 1308 aa21.66■■□□□ 1.06
SVOP-203ENST00000550436 SIN3AQ96ST3 1273 aa21.66■■□□□ 1.06
SVOP-203ENST00000550436 CARD10Q9BWT7 1032 aa21.66■■□□□ 1.06
SVOP-203ENST00000550436 MYOM1P52179 1685 aa21.66■■□□□ 1.06
SVOP-203ENST00000550436 PTGER2P43116 358 aa21.65■■□□□ 1.06
SVOP-203ENST00000550436 TXNRD1Q16881 649 aa21.65■■□□□ 1.06
SVOP-203ENST00000550436 TRPM1Q7Z4N2 1603 aa21.64■■□□□ 1.05
SVOP-203ENST00000550436 NFAT5O94916 1531 aa21.63■■□□□ 1.05
SVOP-203ENST00000550436 BCL9O00512 1426 aa21.63■■□□□ 1.05
SVOP-203ENST00000550436 EXOC5O00471 708 aa21.62■■□□□ 1.05
SVOP-203ENST00000550436 KCNH5Q8NCM2 988 aa21.62■■□□□ 1.05
SVOP-203ENST00000550436 CDCA7Q9BWT1 371 aaPredicted RBP21.62■■□□□ 1.05
SVOP-203ENST00000550436 KAT6BQ8WYB5 2073 aa21.61■■□□□ 1.05
SVOP-203ENST00000550436 DCAF8L1A6NGE4 600 aa21.61■■□□□ 1.05
SVOP-203ENST00000550436 ACSBG1Q96GR2 724 aa21.61■■□□□ 1.05
SVOP-203ENST00000550436 ZNF692Q9BU19 519 aaPredicted RBP21.61■■□□□ 1.05
SVOP-203ENST00000550436 SLC15A2Q16348 729 aa21.6■■□□□ 1.05
SVOP-203ENST00000550436 STK32BQ9NY57 414 aa21.6■■□□□ 1.05
SVOP-203ENST00000550436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.59■■□□□ 1.05
SVOP-203ENST00000550436 KTN1Q86UP2 1357 aaKnown RBP21.59■■□□□ 1.05
SVOP-203ENST00000550436 TTC21AQ8NDW8 1320 aa21.58■■□□□ 1.05
SVOP-203ENST00000550436 NEUROD1Q13562 356 aa21.57■■□□□ 1.04
SVOP-203ENST00000550436 FHDC1Q9C0D6 1143 aaPredicted RBP21.57■■□□□ 1.04
SVOP-203ENST00000550436 ROCK2O75116 1388 aaKnown RBP21.57■■□□□ 1.04
SVOP-203ENST00000550436 MON2Q7Z3U7 1717 aa21.56■■□□□ 1.04
SVOP-203ENST00000550436 NME9Q86XW9 330 aa21.56■■□□□ 1.04
SVOP-203ENST00000550436 CCDC7Q96M83 1385 aa21.56■■□□□ 1.04
SVOP-203ENST00000550436 TNS2Q63HR2 1409 aa21.55■■□□□ 1.04
SVOP-203ENST00000550436 SYT17Q9BSW7 474 aa21.55■■□□□ 1.04
SVOP-203ENST00000550436 NHSQ6T4R5 1651 aa21.55■■□□□ 1.04
SVOP-203ENST00000550436 SGIP1Q9BQI5 828 aa21.54■■□□□ 1.04
SVOP-203ENST00000550436 NLRP2Q9NX02 1062 aa21.54■■□□□ 1.04
SVOP-203ENST00000550436 LTN1O94822 1766 aa21.53■■□□□ 1.04
SVOP-203ENST00000550436 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.04
SVOP-203ENST00000550436 BTAF1O14981 1849 aa21.52■■□□□ 1.04
SVOP-203ENST00000550436 CD163L1Q9NR16 1453 aa21.52■■□□□ 1.03
SVOP-203ENST00000550436 ZNF784Q8NCA9 323 aaPredicted RBP21.51■■□□□ 1.03
SVOP-203ENST00000550436 MTFR1LQ9H019 292 aa21.51■■□□□ 1.03
SVOP-203ENST00000550436 ERBB3P21860 1342 aa21.51■■□□□ 1.03
SVOP-203ENST00000550436 USP31Q70CQ4 1352 aa21.5■■□□□ 1.03
SVOP-203ENST00000550436 ZNF827Q17R98 1081 aa21.5■■□□□ 1.03
SVOP-203ENST00000550436 PAPPAQ13219 1627 aa21.5■■□□□ 1.03
SVOP-203ENST00000550436 SBNO2Q9Y2G9 1366 aa21.49■■□□□ 1.03
SVOP-203ENST00000550436 LRRC4BQ9NT99 713 aa21.49■■□□□ 1.03
SVOP-203ENST00000550436 ABCC6O95255 1503 aa21.49■■□□□ 1.03
SVOP-203ENST00000550436 IL2RBP14784 551 aa21.48■■□□□ 1.03
SVOP-203ENST00000550436 ANKRD24Q8TF21 1146 aa21.48■■□□□ 1.03
SVOP-203ENST00000550436 SLC12A5Q9H2X9 1139 aa21.48■■□□□ 1.03
SVOP-203ENST00000550436 USP54Q70EL1 1684 aa21.47■■□□□ 1.03
SVOP-203ENST00000550436 TMC1Q8TDI8 760 aa21.47■■□□□ 1.03
SVOP-203ENST00000550436 ARXQ96QS3 562 aa21.46■■□□□ 1.03
SVOP-203ENST00000550436 CHD4Q14839 1912 aa21.46■■□□□ 1.03
SVOP-203ENST00000550436 KCNQ4P56696 695 aa21.44■■□□□ 1.02
SVOP-203ENST00000550436 UTRNP46939 3433 aa21.44■■□□□ 1.02
SVOP-203ENST00000550436 LTV1Q96GA3 475 aaPredicted RBP21.43■■□□□ 1.02
SVOP-203ENST00000550436 DDX54Q8TDD1 881 aaKnown RBP21.42■■□□□ 1.02
SVOP-203ENST00000550436 FBLN1P23142 703 aa21.41■■□□□ 1.02
SVOP-203ENST00000550436 AKT1S1Q96B36 256 aa21.4■■□□□ 1.02
SVOP-203ENST00000550436 CARD11Q9BXL7 1154 aa21.4■■□□□ 1.02
SVOP-203ENST00000550436 A0A1W2PP64 1363 aa21.39■■□□□ 1.02
SVOP-203ENST00000550436 HDGFL2Q7Z4V5 671 aaPredicted RBP21.39■■□□□ 1.01
SVOP-203ENST00000550436 KLHL34Q8N239 644 aa21.39■■□□□ 1.01
SVOP-203ENST00000550436 TUBGCP6Q96RT7 1819 aa21.39■■□□□ 1.01
SVOP-203ENST00000550436 RGPD2P0DJD1 1756 aa21.38■■□□□ 1.01
SVOP-203ENST00000550436 EDC4Q6P2E9 1401 aaKnown RBP21.38■■□□□ 1.01
SVOP-203ENST00000550436 IP6K1Q92551 441 aa21.37■■□□□ 1.01
SVOP-203ENST00000550436 PNPLA7Q6ZV29 1317 aa21.36■■□□□ 1.01
SVOP-203ENST00000550436 MAP3K5Q99683 1374 aa21.36■■□□□ 1.01
SVOP-203ENST00000550436 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
SVOP-203ENST00000550436 SYTL4Q96C24 671 aaPredicted RBP21.35■■□□□ 1.01
SVOP-203ENST00000550436 GPR162Q16538 588 aa21.34■■□□□ 1.01
SVOP-203ENST00000550436 QSER1Q2KHR3 1735 aa21.33■■□□□ 1.01
SVOP-203ENST00000550436 DOT1LQ8TEK3 1739 aa21.33■■□□□ 1.01
SVOP-203ENST00000550436 TERF2IPQ9NYB0 399 aa21.33■■□□□ 1.01
SVOP-203ENST00000550436 COL24A1Q17RW2 1714 aa21.32■■□□□ 1
SVOP-203ENST00000550436 SHANK3Q9BYB0 1731 aa21.32■■□□□ 1
SVOP-203ENST00000550436 FAM208AQ9UK61 1670 aaKnown RBP21.32■■□□□ 1
SVOP-203ENST00000550436 SENP3-EIF4A1A0A087X0R7 540 aa21.32■■□□□ 1
SVOP-203ENST00000550436 PELP1Q8IZL8 1130 aaKnown RBP21.32■■□□□ 1
SVOP-203ENST00000550436 NLGN2Q8NFZ4 835 aa21.32■■□□□ 1
SVOP-203ENST00000550436 NSD2O96028 1365 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms