RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 FBLN1P23142 703 aa18.99■□□□□ 0.63
CACNB3-216ENST00000550391 MTHFSP49914 203 aa18.99■□□□□ 0.63
CACNB3-216ENST00000550391 LMOD2Q6P5Q4 547 aa18.99■□□□□ 0.63
CACNB3-216ENST00000550391 POLKQ9UBT6 870 aa18.99■□□□□ 0.63
CACNB3-216ENST00000550391 CRYBG1Q9Y4K1 1723 aa18.99■□□□□ 0.63
CACNB3-216ENST00000550391 PSDA5PKW4 1024 aaPredicted RBP18.98■□□□□ 0.63
CACNB3-216ENST00000550391 PHRF1Q9P1Y6 1649 aaKnown RBP18.97■□□□□ 0.63
CACNB3-216ENST00000550391 NFAT5O94916 1531 aa18.97■□□□□ 0.63
CACNB3-216ENST00000550391 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
CACNB3-216ENST00000550391 KCNH5Q8NCM2 988 aa18.96■□□□□ 0.63
CACNB3-216ENST00000550391 RRS1Q15050 365 aaKnown RBP18.95■□□□□ 0.62
CACNB3-216ENST00000550391 BAG6P46379 1132 aa18.94■□□□□ 0.62
CACNB3-216ENST00000550391 CFAP53Q96M91 514 aa18.94■□□□□ 0.62
CACNB3-216ENST00000550391 EMILIN1Q9Y6C2 1016 aa18.94■□□□□ 0.62
CACNB3-216ENST00000550391 PEAK1Q9H792 1746 aa18.94■□□□□ 0.62
CACNB3-216ENST00000550391 INSRP06213 1382 aa18.93■□□□□ 0.62
CACNB3-216ENST00000550391 COL3A1P02461 1466 aaPredicted RBP18.93■□□□□ 0.62
CACNB3-216ENST00000550391 SOX12O15370 315 aa18.93■□□□□ 0.62
CACNB3-216ENST00000550391 GCP02774 474 aa18.93■□□□□ 0.62
CACNB3-216ENST00000550391 PNISRQ8TF01 805 aaKnown RBP18.93■□□□□ 0.62
CACNB3-216ENST00000550391 LTN1O94822 1766 aa18.93■□□□□ 0.62
CACNB3-216ENST00000550391 ABCA3Q99758 1704 aa18.92■□□□□ 0.62
CACNB3-216ENST00000550391 MAP3K19Q56UN5 1328 aa18.92■□□□□ 0.62
CACNB3-216ENST00000550391 KIF24Q5T7B8 1368 aa18.91■□□□□ 0.62
CACNB3-216ENST00000550391 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
CACNB3-216ENST00000550391 PPM1GO15355 546 aaPredicted RBP18.89■□□□□ 0.61
CACNB3-216ENST00000550391 CABLES1Q8TDN4 633 aa18.89■□□□□ 0.61
CACNB3-216ENST00000550391 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
CACNB3-216ENST00000550391 ARHGEF25Q86VW2 580 aa18.88■□□□□ 0.61
CACNB3-216ENST00000550391 RTL1A6NKG5 1358 aa18.88■□□□□ 0.61
CACNB3-216ENST00000550391 FLT4P35916 1363 aa18.88■□□□□ 0.61
CACNB3-216ENST00000550391 UNC5CLQ8IV45 518 aa18.87■□□□□ 0.61
CACNB3-216ENST00000550391 FAM9BQ8IZU0 186 aa18.87■□□□□ 0.61
CACNB3-216ENST00000550391 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.86■□□□□ 0.61
CACNB3-216ENST00000550391 AMPHP49418 695 aa18.86■□□□□ 0.61
CACNB3-216ENST00000550391 DIAPH1O60610 1272 aaKnown RBP18.85■□□□□ 0.61
CACNB3-216ENST00000550391 HOXC9P31274 260 aa18.85■□□□□ 0.61
CACNB3-216ENST00000550391 WDR43Q15061 677 aaKnown RBP eCLIP18.85■□□□□ 0.61
CACNB3-216ENST00000550391 CPDO75976 1380 aa18.84■□□□□ 0.61
CACNB3-216ENST00000550391 ZC3H6P61129 1189 aaKnown RBP18.84■□□□□ 0.61
CACNB3-216ENST00000550391 HSP90AB2PQ58FF8 381 aa18.84■□□□□ 0.61
CACNB3-216ENST00000550391 SEPT12Q8IYM1 358 aa18.84■□□□□ 0.61
CACNB3-216ENST00000550391 IP6K1Q92551 441 aa18.84■□□□□ 0.61
CACNB3-216ENST00000550391 BRWD3Q6RI45 1802 aa18.84■□□□□ 0.61
CACNB3-216ENST00000550391 COL18A1P39060 1754 aa18.83■□□□□ 0.61
CACNB3-216ENST00000550391 IL13P35225 146 aa18.83■□□□□ 0.6
CACNB3-216ENST00000550391 R3HDM1Q15032 1099 aaKnown RBP18.83■□□□□ 0.6
CACNB3-216ENST00000550391 KRT27Q7Z3Y8 459 aa18.83■□□□□ 0.6
CACNB3-216ENST00000550391 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
CACNB3-216ENST00000550391 GLI3P10071 1580 aa18.83■□□□□ 0.6
CACNB3-216ENST00000550391 ABCC6O95255 1503 aa18.83■□□□□ 0.6
CACNB3-216ENST00000550391 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
CACNB3-216ENST00000550391 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
CACNB3-216ENST00000550391 HAP1P54257 671 aaPredicted RBP18.81■□□□□ 0.6
CACNB3-216ENST00000550391 EIF4A2Q14240 407 aaKnown RBP18.81■□□□□ 0.6
CACNB3-216ENST00000550391 SLIT2O94813 1529 aa18.8■□□□□ 0.6
CACNB3-216ENST00000550391 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
CACNB3-216ENST00000550391 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
CACNB3-216ENST00000550391 ONECUT3O60422 494 aaPredicted RBP18.8■□□□□ 0.6
CACNB3-216ENST00000550391 RGPD1P0DJD0 1748 aa18.8■□□□□ 0.6
CACNB3-216ENST00000550391 RGPD5Q99666 1765 aa18.79■□□□□ 0.6
CACNB3-216ENST00000550391 LMO7Q8WWI1 1683 aa18.79■□□□□ 0.6
CACNB3-216ENST00000550391 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
CACNB3-216ENST00000550391 AXIN2Q9Y2T1 843 aa18.78■□□□□ 0.6
CACNB3-216ENST00000550391 U2AF1L5P0DN76 240 aaPredicted RBP18.77■□□□□ 0.6
CACNB3-216ENST00000550391 U2AF1Q01081 240 aaKnown RBP eCLIP18.77■□□□□ 0.6
CACNB3-216ENST00000550391 YTHDC1Q96MU7 727 aaKnown RBP18.77■□□□□ 0.6
CACNB3-216ENST00000550391 EN1Q05925 392 aaPredicted RBP18.76■□□□□ 0.59
CACNB3-216ENST00000550391 CHRNA2Q15822 529 aa18.76■□□□□ 0.59
CACNB3-216ENST00000550391 PRDM11Q9NQV5 511 aa18.75■□□□□ 0.59
CACNB3-216ENST00000550391 COL14A1Q05707 1796 aaKnown RBP18.74■□□□□ 0.59
CACNB3-216ENST00000550391 VPS72Q15906 364 aa18.74■□□□□ 0.59
CACNB3-216ENST00000550391 CAMTA1Q9Y6Y1 1673 aa18.73■□□□□ 0.59
CACNB3-216ENST00000550391 FAM83GA6ND36 823 aa18.73■□□□□ 0.59
CACNB3-216ENST00000550391 ANKRD24Q8TF21 1146 aa18.73■□□□□ 0.59
CACNB3-216ENST00000550391 LTV1Q96GA3 475 aaPredicted RBP18.73■□□□□ 0.59
CACNB3-216ENST00000550391 EYA1Q99502 592 aa18.73■□□□□ 0.59
CACNB3-216ENST00000550391 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
CACNB3-216ENST00000550391 FCHSD2O94868 740 aa18.72■□□□□ 0.59
CACNB3-216ENST00000550391 PNNQ9H307 717 aaKnown RBP18.72■□□□□ 0.59
CACNB3-216ENST00000550391 RGPD2P0DJD1 1756 aa18.72■□□□□ 0.59
CACNB3-216ENST00000550391 FAM208AQ9UK61 1670 aaKnown RBP18.72■□□□□ 0.59
CACNB3-216ENST00000550391 ERBB3P21860 1342 aa18.72■□□□□ 0.59
CACNB3-216ENST00000550391 RSPH6AQ9H0K4 717 aa18.71■□□□□ 0.59
CACNB3-216ENST00000550391 DISP2A7MBM2 1401 aa18.7■□□□□ 0.58
CACNB3-216ENST00000550391 HMOX1P09601 288 aa18.7■□□□□ 0.58
CACNB3-216ENST00000550391 HNRNPUQ00839 825 aaKnown RBP eCLIP18.7■□□□□ 0.58
CACNB3-216ENST00000550391 CCDC146Q8IYE0 955 aa18.7■□□□□ 0.58
CACNB3-216ENST00000550391 RUNDC1Q96C34 613 aa18.7■□□□□ 0.58
CACNB3-216ENST00000550391 PLEKHF1Q96S99 279 aa18.7■□□□□ 0.58
CACNB3-216ENST00000550391 COL5A2P05997 1499 aaPredicted RBP18.7■□□□□ 0.58
CACNB3-216ENST00000550391 KDRP35968 1356 aa18.69■□□□□ 0.58
CACNB3-216ENST00000550391 NCAPD2Q15021 1401 aa18.69■□□□□ 0.58
CACNB3-216ENST00000550391 C1QTNF8P60827 252 aa18.69■□□□□ 0.58
CACNB3-216ENST00000550391 NBPF6Q5VWK0 638 aa18.69■□□□□ 0.58
CACNB3-216ENST00000550391 SULT6B1Q6IMI4 303 aa18.69■□□□□ 0.58
CACNB3-216ENST00000550391 ZNF784Q8NCA9 323 aaPredicted RBP18.69■□□□□ 0.58
CACNB3-216ENST00000550391 NBPF4Q96M43 638 aa18.69■□□□□ 0.58
CACNB3-216ENST00000550391 PLCH1Q4KWH8 1693 aa18.69■□□□□ 0.58
CACNB3-216ENST00000550391 AEBP1Q8IUX7 1158 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms