RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 EMILIN1Q9Y6C2 1016 aa14.18□□□□□ -0.14
CHPT1-206ENST00000550385 MAP2P11137 1827 aaKnown RBP14.18□□□□□ -0.14
CHPT1-206ENST00000550385 HAP1P54257 671 aaPredicted RBP14.17□□□□□ -0.14
CHPT1-206ENST00000550385 MAP3K19Q56UN5 1328 aa14.16□□□□□ -0.14
CHPT1-206ENST00000550385 SMG6Q86US8 1419 aaKnown RBP14.16□□□□□ -0.14
CHPT1-206ENST00000550385 SLIT3O75094 1523 aa14.16□□□□□ -0.14
CHPT1-206ENST00000550385 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
CHPT1-206ENST00000550385 PNNQ9H307 717 aaKnown RBP14.16□□□□□ -0.14
CHPT1-206ENST00000550385 FLT4P35916 1363 aa14.15□□□□□ -0.14
CHPT1-206ENST00000550385 IP6K1Q92551 441 aa14.15□□□□□ -0.14
CHPT1-206ENST00000550385 CDK12Q9NYV4 1490 aaPredicted RBP14.14□□□□□ -0.15
CHPT1-206ENST00000550385 RTL1A6NKG5 1358 aa14.14□□□□□ -0.15
CHPT1-206ENST00000550385 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
CHPT1-206ENST00000550385 HOXC9P31274 260 aa14.13□□□□□ -0.15
CHPT1-206ENST00000550385 ZC3H6P61129 1189 aaKnown RBP14.13□□□□□ -0.15
CHPT1-206ENST00000550385 CABLES1Q8TDN4 633 aa14.13□□□□□ -0.15
CHPT1-206ENST00000550385 MED1Q15648 1581 aaPredicted RBP14.13□□□□□ -0.15
CHPT1-206ENST00000550385 IL13P35225 146 aa14.12□□□□□ -0.15
CHPT1-206ENST00000550385 HSP90AB2PQ58FF8 381 aa14.12□□□□□ -0.15
CHPT1-206ENST00000550385 ADAMTS8Q9UP79 889 aa14.12□□□□□ -0.15
CHPT1-206ENST00000550385 PHLPP1O60346 1717 aa14.12□□□□□ -0.15
CHPT1-206ENST00000550385 MARF1Q9Y4F3 1742 aaKnown RBP14.12□□□□□ -0.15
CHPT1-206ENST00000550385 CPDO75976 1380 aa14.11□□□□□ -0.15
CHPT1-206ENST00000550385 NFAT5O94916 1531 aa14.11□□□□□ -0.15
CHPT1-206ENST00000550385 ZBTB7CA1YPR0 619 aa14.11□□□□□ -0.15
CHPT1-206ENST00000550385 U2SURPO15042 1029 aaKnown RBP14.11□□□□□ -0.15
CHPT1-206ENST00000550385 U2AF1L5P0DN76 240 aaPredicted RBP14.11□□□□□ -0.15
CHPT1-206ENST00000550385 U2AF1Q01081 240 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHPT1-206ENST00000550385 FCHSD2O94868 740 aa14.1□□□□□ -0.15
CHPT1-206ENST00000550385 BLMP54132 1417 aaPredicted RBP14.09□□□□□ -0.15
CHPT1-206ENST00000550385 NEFMP07197 916 aa14.09□□□□□ -0.15
CHPT1-206ENST00000550385 EIF4A2Q14240 407 aaKnown RBP14.09□□□□□ -0.15
CHPT1-206ENST00000550385 PRDM11Q9NQV5 511 aa14.09□□□□□ -0.15
CHPT1-206ENST00000550385 COL3A1P02461 1466 aaPredicted RBP14.09□□□□□ -0.15
CHPT1-206ENST00000550385 JCADQ9P266 1359 aa14.09□□□□□ -0.15
CHPT1-206ENST00000550385 COL16A1Q07092 1604 aaPredicted RBP14.08□□□□□ -0.15
CHPT1-206ENST00000550385 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
CHPT1-206ENST00000550385 RUNDC1Q96C34 613 aa14.07□□□□□ -0.16
CHPT1-206ENST00000550385 YTHDC1Q96MU7 727 aaKnown RBP14.07□□□□□ -0.16
CHPT1-206ENST00000550385 PHRF1Q9P1Y6 1649 aaKnown RBP14.07□□□□□ -0.16
CHPT1-206ENST00000550385 KIAA0232Q92628 1395 aa14.07□□□□□ -0.16
CHPT1-206ENST00000550385 ABCC6O95255 1503 aa14.06□□□□□ -0.16
CHPT1-206ENST00000550385 COL22A1Q8NFW1 1626 aaPredicted RBP14.06□□□□□ -0.16
CHPT1-206ENST00000550385 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
CHPT1-206ENST00000550385 LTN1O94822 1766 aa14.05□□□□□ -0.16
CHPT1-206ENST00000550385 HSPA1LP34931 641 aa14.05□□□□□ -0.16
CHPT1-206ENST00000550385 HNRNPUQ00839 825 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHPT1-206ENST00000550385 ANKRD24Q8TF21 1146 aa14.05□□□□□ -0.16
CHPT1-206ENST00000550385 LTV1Q96GA3 475 aaPredicted RBP14.05□□□□□ -0.16
CHPT1-206ENST00000550385 SPATA31A6Q5VVP1 1343 aa14.05□□□□□ -0.16
CHPT1-206ENST00000550385 PEAK1Q9H792 1746 aa14.04□□□□□ -0.16
CHPT1-206ENST00000550385 FAM83GA6ND36 823 aa14.04□□□□□ -0.16
CHPT1-206ENST00000550385 CHRNA2Q15822 529 aa14.04□□□□□ -0.16
CHPT1-206ENST00000550385 EYA1Q99502 592 aa14.04□□□□□ -0.16
CHPT1-206ENST00000550385 AXIN2Q9Y2T1 843 aa14.04□□□□□ -0.16
CHPT1-206ENST00000550385 CRYBG1Q9Y4K1 1723 aa14.04□□□□□ -0.16
CHPT1-206ENST00000550385 CSB-PGBD3P0DP91 1061 aa14.03□□□□□ -0.16
CHPT1-206ENST00000550385 EVA1CP58658 441 aa14.03□□□□□ -0.16
CHPT1-206ENST00000550385 SULT6B1Q6IMI4 303 aa14.03□□□□□ -0.16
CHPT1-206ENST00000550385 IGSF1Q8N6C5 1336 aa14.03□□□□□ -0.16
CHPT1-206ENST00000550385 MAPK8IP3Q9UPT6 1336 aa14.03□□□□□ -0.16
CHPT1-206ENST00000550385 SHPRHQ149N8 1683 aa14.03□□□□□ -0.16
CHPT1-206ENST00000550385 ERBB3P21860 1342 aa14.02□□□□□ -0.17
CHPT1-206ENST00000550385 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
CHPT1-206ENST00000550385 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
CHPT1-206ENST00000550385 HMOX1P09601 288 aa14.02□□□□□ -0.17
CHPT1-206ENST00000550385 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
CHPT1-206ENST00000550385 RSPH6AQ9H0K4 717 aa14.02□□□□□ -0.17
CHPT1-206ENST00000550385 PRKAR2BP31323 418 aa14.01□□□□□ -0.17
CHPT1-206ENST00000550385 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
CHPT1-206ENST00000550385 PLEKHF1Q96S99 279 aa14.01□□□□□ -0.17
CHPT1-206ENST00000550385 APAF1O14727 1248 aa14□□□□□ -0.17
CHPT1-206ENST00000550385 ADAMTS2O95450 1211 aa14□□□□□ -0.17
CHPT1-206ENST00000550385 NBPF6Q5VWK0 638 aa14□□□□□ -0.17
CHPT1-206ENST00000550385 NBPF4Q96M43 638 aa14□□□□□ -0.17
CHPT1-206ENST00000550385 NLRP2Q9NX02 1062 aa14□□□□□ -0.17
CHPT1-206ENST00000550385 ABCA3Q99758 1704 aa13.99□□□□□ -0.17
CHPT1-206ENST00000550385 TCP11L2Q8N4U5 519 aa13.99□□□□□ -0.17
CHPT1-206ENST00000550385 FBXO41Q8TF61 875 aa13.99□□□□□ -0.17
CHPT1-206ENST00000550385 BTG4Q9NY30 223 aa13.99□□□□□ -0.17
CHPT1-206ENST00000550385 COL18A1P39060 1754 aa13.99□□□□□ -0.17
CHPT1-206ENST00000550385 KDRP35968 1356 aa13.98□□□□□ -0.17
CHPT1-206ENST00000550385 ZBED9Q6R2W3 1325 aa13.98□□□□□ -0.17
CHPT1-206ENST00000550385 WDR17Q8IZU2 1322 aa13.98□□□□□ -0.17
CHPT1-206ENST00000550385 TOM1L2Q6ZVM7 507 aa13.98□□□□□ -0.17
CHPT1-206ENST00000550385 CENPBP07199 599 aaPredicted RBP13.97□□□□□ -0.17
CHPT1-206ENST00000550385 CAMTA1Q9Y6Y1 1673 aa13.97□□□□□ -0.17
CHPT1-206ENST00000550385 COL14A1Q05707 1796 aaKnown RBP13.96□□□□□ -0.17
CHPT1-206ENST00000550385 TMPOP42166 694 aaKnown RBP13.96□□□□□ -0.17
CHPT1-206ENST00000550385 PDE3BQ13370 1112 aa13.96□□□□□ -0.17
CHPT1-206ENST00000550385 CCDC27Q2M243 656 aa13.96□□□□□ -0.17
CHPT1-206ENST00000550385 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.17
CHPT1-206ENST00000550385 AEBP1Q8IUX7 1158 aa13.96□□□□□ -0.17
CHPT1-206ENST00000550385 RAPGEF4Q8WZA2 1011 aa13.96□□□□□ -0.17
CHPT1-206ENST00000550385 NGLY1Q96IV0 654 aa13.96□□□□□ -0.17
CHPT1-206ENST00000550385 CARD10Q9BWT7 1032 aa13.96□□□□□ -0.17
CHPT1-206ENST00000550385 STRN4Q9NRL3 753 aa13.96□□□□□ -0.17
CHPT1-206ENST00000550385 RGPD1P0DJD0 1748 aa13.95□□□□□ -0.18
CHPT1-206ENST00000550385 COL5A2P05997 1499 aaPredicted RBP13.95□□□□□ -0.18
CHPT1-206ENST00000550385 LMOD3Q0VAK6 560 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms