RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 BCL9LQ86UU0 1499 aa23.45■■□□□ 1.34
BRF1-217ENST00000550375 CAMTA1Q9Y6Y1 1673 aa23.44■■□□□ 1.34
BRF1-217ENST00000550375 NRAPQ86VF7 1730 aa23.44■■□□□ 1.34
BRF1-217ENST00000550375 ZNF772Q68DY9 489 aaPredicted RBP23.43■■□□□ 1.34
BRF1-217ENST00000550375 AXIN2Q9Y2T1 843 aa23.43■■□□□ 1.34
BRF1-217ENST00000550375 AMPHP49418 695 aa23.42■■□□□ 1.34
BRF1-217ENST00000550375 UNC5CLQ8IV45 518 aa23.42■■□□□ 1.34
BRF1-217ENST00000550375 STRN4Q9NRL3 753 aa23.42■■□□□ 1.34
BRF1-217ENST00000550375 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.42■■□□□ 1.34
BRF1-217ENST00000550375 EMILIN1Q9Y6C2 1016 aa23.41■■□□□ 1.34
BRF1-217ENST00000550375 PEAK1Q9H792 1746 aa23.41■■□□□ 1.34
BRF1-217ENST00000550375 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
BRF1-217ENST00000550375 EVA1CP58658 441 aa23.4■■□□□ 1.34
BRF1-217ENST00000550375 QTRT2Q9H974 415 aaKnown RBP23.4■■□□□ 1.34
BRF1-217ENST00000550375 IP6K1Q92551 441 aa23.39■■□□□ 1.33
BRF1-217ENST00000550375 POLKQ9UBT6 870 aa23.39■■□□□ 1.33
BRF1-217ENST00000550375 ABCC6O95255 1503 aa23.38■■□□□ 1.33
BRF1-217ENST00000550375 HOXC9P31274 260 aa23.38■■□□□ 1.33
BRF1-217ENST00000550375 TRPC5Q9UL62 973 aaPredicted RBP23.38■■□□□ 1.33
BRF1-217ENST00000550375 CCDC9Q9Y3X0 531 aaKnown RBP23.38■■□□□ 1.33
BRF1-217ENST00000550375 COL5A2P05997 1499 aaPredicted RBP23.37■■□□□ 1.33
BRF1-217ENST00000550375 LTV1Q96GA3 475 aaPredicted RBP23.36■■□□□ 1.33
BRF1-217ENST00000550375 ATRNO75882 1429 aa23.36■■□□□ 1.33
BRF1-217ENST00000550375 RTL1A6NKG5 1358 aa23.35■■□□□ 1.33
BRF1-217ENST00000550375 CSB-PGBD3P0DP91 1061 aa23.35■■□□□ 1.33
BRF1-217ENST00000550375 LARP1Q6PKG0 1096 aaKnown RBP23.35■■□□□ 1.33
BRF1-217ENST00000550375 FLT4P35916 1363 aa23.34■■□□□ 1.33
BRF1-217ENST00000550375 VPS72Q15906 364 aa23.34■■□□□ 1.33
BRF1-217ENST00000550375 ANKRD24Q8TF21 1146 aa23.34■■□□□ 1.33
BRF1-217ENST00000550375 BLMP54132 1417 aaPredicted RBP23.34■■□□□ 1.33
BRF1-217ENST00000550375 HSP90AB2PQ58FF8 381 aa23.33■■□□□ 1.33
BRF1-217ENST00000550375 KIF24Q5T7B8 1368 aa23.32■■□□□ 1.32
BRF1-217ENST00000550375 TOM1L2Q6ZVM7 507 aa23.31■■□□□ 1.32
BRF1-217ENST00000550375 USP35Q9P2H5 1018 aa23.31■■□□□ 1.32
BRF1-217ENST00000550375 ERBB3P21860 1342 aa23.31■■□□□ 1.32
BRF1-217ENST00000550375 WDR17Q8IZU2 1322 aa23.31■■□□□ 1.32
BRF1-217ENST00000550375 MTHFSP49914 203 aa23.3■■□□□ 1.32
BRF1-217ENST00000550375 GJD4Q96KN9 370 aaPredicted RBP23.3■■□□□ 1.32
BRF1-217ENST00000550375 RGPD2P0DJD1 1756 aa23.3■■□□□ 1.32
BRF1-217ENST00000550375 SMG6Q86US8 1419 aaKnown RBP23.3■■□□□ 1.32
BRF1-217ENST00000550375 INSRP06213 1382 aa23.29■■□□□ 1.32
BRF1-217ENST00000550375 PARD3Q8TEW0 1356 aa23.29■■□□□ 1.32
BRF1-217ENST00000550375 GLI3P10071 1580 aa23.29■■□□□ 1.32
BRF1-217ENST00000550375 SPATA31A5Q5VU36 1347 aa23.29■■□□□ 1.32
BRF1-217ENST00000550375 SPATA31A7Q8IWB4 1347 aa23.29■■□□□ 1.32
BRF1-217ENST00000550375 RXRBP28702 533 aa23.28■■□□□ 1.32
BRF1-217ENST00000550375 PPP2R1AP30153 589 aa23.28■■□□□ 1.32
BRF1-217ENST00000550375 RBM6P78332 1123 aaKnown RBP23.28■■□□□ 1.32
BRF1-217ENST00000550375 CRB1P82279 1406 aa23.28■■□□□ 1.32
BRF1-217ENST00000550375 NLRP2Q9NX02 1062 aa23.27■■□□□ 1.32
BRF1-217ENST00000550375 SPATA31A1Q5TZJ5 1347 aa23.27■■□□□ 1.32
BRF1-217ENST00000550375 CDK12Q9NYV4 1490 aaPredicted RBP23.26■■□□□ 1.31
BRF1-217ENST00000550375 FAM208AQ9UK61 1670 aaKnown RBP23.26■■□□□ 1.31
BRF1-217ENST00000550375 RALBP1Q15311 655 aa23.26■■□□□ 1.31
BRF1-217ENST00000550375 CARD10Q9BWT7 1032 aa23.24■■□□□ 1.31
BRF1-217ENST00000550375 EIF4A2Q14240 407 aaKnown RBP23.23■■□□□ 1.31
BRF1-217ENST00000550375 FAM98CQ17RN3 349 aaKnown RBP23.23■■□□□ 1.31
BRF1-217ENST00000550375 TCP11L2Q8N4U5 519 aa23.22■■□□□ 1.31
BRF1-217ENST00000550375 PRKRIP1Q9H875 184 aaPredicted RBP23.22■■□□□ 1.31
BRF1-217ENST00000550375 A0A0G2JS52 829 aa23.21■■□□□ 1.31
BRF1-217ENST00000550375 MYT1Q01538 1121 aa23.21■■□□□ 1.31
BRF1-217ENST00000550375 NBPF6Q5VWK0 638 aa23.21■■□□□ 1.31
BRF1-217ENST00000550375 NBPF4Q96M43 638 aa23.21■■□□□ 1.31
BRF1-217ENST00000550375 USHBP1Q8N6Y0 703 aa23.2■■□□□ 1.3
BRF1-217ENST00000550375 WNK3Q9BYP7 1800 aa23.19■■□□□ 1.3
BRF1-217ENST00000550375 CFAP53Q96M91 514 aa23.18■■□□□ 1.3
BRF1-217ENST00000550375 THRAP3Q9Y2W1 955 aaKnown RBP23.18■■□□□ 1.3
BRF1-217ENST00000550375 MYBBP1AQ9BQG0 1328 aaKnown RBP23.18■■□□□ 1.3
BRF1-217ENST00000550375 RGS12O14924 1447 aa23.17■■□□□ 1.3
BRF1-217ENST00000550375 ANP32CO43423 234 aa23.17■■□□□ 1.3
BRF1-217ENST00000550375 DIAPH1O60610 1272 aaKnown RBP23.16■■□□□ 1.3
BRF1-217ENST00000550375 IL13P35225 146 aa23.16■■□□□ 1.3
BRF1-217ENST00000550375 BARGINQ6ZT62 677 aa23.16■■□□□ 1.3
BRF1-217ENST00000550375 SEPT12Q8IYM1 358 aa23.16■■□□□ 1.3
BRF1-217ENST00000550375 UPF1Q92900 1129 aaKnown RBP eCLIP23.16■■□□□ 1.3
BRF1-217ENST00000550375 EYA1Q99502 592 aa23.16■■□□□ 1.3
BRF1-217ENST00000550375 COL3A1P02461 1466 aaPredicted RBP23.16■■□□□ 1.3
BRF1-217ENST00000550375 BRWD3Q6RI45 1802 aa23.15■■□□□ 1.3
BRF1-217ENST00000550375 ONECUT3O60422 494 aaPredicted RBP23.14■■□□□ 1.3
BRF1-217ENST00000550375 THSD7AQ9UPZ6 1657 aa23.14■■□□□ 1.3
BRF1-217ENST00000550375 RGPD1P0DJD0 1748 aa23.12■■□□□ 1.29
BRF1-217ENST00000550375 U2SURPO15042 1029 aaKnown RBP23.11■■□□□ 1.29
BRF1-217ENST00000550375 IL2RBP14784 551 aa23.11■■□□□ 1.29
BRF1-217ENST00000550375 DISP2A7MBM2 1401 aa23.11■■□□□ 1.29
BRF1-217ENST00000550375 PARP4Q9UKK3 1724 aaKnown RBP23.1■■□□□ 1.29
BRF1-217ENST00000550375 IGSF1Q8N6C5 1336 aa23.1■■□□□ 1.29
BRF1-217ENST00000550375 CDCA7Q9BWT1 371 aaPredicted RBP23.1■■□□□ 1.29
BRF1-217ENST00000550375 LRRC37A3O60309 1634 aa23.09■■□□□ 1.29
BRF1-217ENST00000550375 AEBP1Q8IUX7 1158 aa23.08■■□□□ 1.29
BRF1-217ENST00000550375 RAPGEF4Q8WZA2 1011 aa23.08■■□□□ 1.29
BRF1-217ENST00000550375 MEGF6O75095 1541 aa23.08■■□□□ 1.29
BRF1-217ENST00000550375 NCAPD2Q15021 1401 aa23.07■■□□□ 1.28
BRF1-217ENST00000550375 DDB1Q16531 1140 aa23.07■■□□□ 1.28
BRF1-217ENST00000550375 SULT6B1Q6IMI4 303 aa23.07■■□□□ 1.28
BRF1-217ENST00000550375 NUDCQ9Y266 331 aa23.07■■□□□ 1.28
BRF1-217ENST00000550375 HMOX1P09601 288 aa23.06■■□□□ 1.28
BRF1-217ENST00000550375 TATP17735 454 aaPredicted RBP23.06■■□□□ 1.28
BRF1-217ENST00000550375 DIEXFQ68CQ4 756 aaKnown RBP23.06■■□□□ 1.28
BRF1-217ENST00000550375 EXOC5O00471 708 aa23.05■■□□□ 1.28
BRF1-217ENST00000550375 PDE3BQ13370 1112 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms