RNA–Protein interactions for RNA: ENST00000550339.1

NR4A1-214, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 500 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-214ENST00000550339 LTN1O94822 1766 aa16.16■□□□□ 0.18
NR4A1-214ENST00000550339 FAM83GA6ND36 823 aa16.16■□□□□ 0.18
NR4A1-214ENST00000550339 POLKQ9UBT6 870 aa16.16■□□□□ 0.18
NR4A1-214ENST00000550339 AATKQ6ZMQ8 1374 aa16.15■□□□□ 0.18
NR4A1-214ENST00000550339 PPP2R1AP30153 589 aa16.15■□□□□ 0.18
NR4A1-214ENST00000550339 NGLY1Q96IV0 654 aa16.15■□□□□ 0.18
NR4A1-214ENST00000550339 CPDO75976 1380 aa16.14■□□□□ 0.17
NR4A1-214ENST00000550339 MTHFSP49914 203 aa16.14■□□□□ 0.17
NR4A1-214ENST00000550339 HOXC9P31274 260 aa16.12■□□□□ 0.17
NR4A1-214ENST00000550339 IP6K1Q92551 441 aa16.12■□□□□ 0.17
NR4A1-214ENST00000550339 BTG4Q9NY30 223 aa16.12■□□□□ 0.17
NR4A1-214ENST00000550339 AXIN2Q9Y2T1 843 aa16.12■□□□□ 0.17
NR4A1-214ENST00000550339 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
NR4A1-214ENST00000550339 PEAK1Q9H792 1746 aa16.11■□□□□ 0.17
NR4A1-214ENST00000550339 COL14A1Q05707 1796 aaKnown RBP16.11■□□□□ 0.17
NR4A1-214ENST00000550339 RGPD5Q99666 1765 aa16.11■□□□□ 0.17
NR4A1-214ENST00000550339 HSP90AB2PQ58FF8 381 aa16.11■□□□□ 0.17
NR4A1-214ENST00000550339 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
NR4A1-214ENST00000550339 EVA1CP58658 441 aa16.1■□□□□ 0.17
NR4A1-214ENST00000550339 STRN4Q9NRL3 753 aa16.1■□□□□ 0.17
NR4A1-214ENST00000550339 FLT4P35916 1363 aa16.1■□□□□ 0.17
NR4A1-214ENST00000550339 COL18A1P39060 1754 aa16.1■□□□□ 0.17
NR4A1-214ENST00000550339 PLCH1Q4KWH8 1693 aa16.09■□□□□ 0.17
NR4A1-214ENST00000550339 RTL1A6NKG5 1358 aa16.09■□□□□ 0.17
NR4A1-214ENST00000550339 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.17
NR4A1-214ENST00000550339 CSB-PGBD3P0DP91 1061 aa16.08■□□□□ 0.16
NR4A1-214ENST00000550339 AFF2P51816 1311 aa16.08■□□□□ 0.16
NR4A1-214ENST00000550339 ANKRD24Q8TF21 1146 aa16.07■□□□□ 0.16
NR4A1-214ENST00000550339 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
NR4A1-214ENST00000550339 USP21Q9UK80 565 aa16.07■□□□□ 0.16
NR4A1-214ENST00000550339 KIF24Q5T7B8 1368 aa16.07■□□□□ 0.16
NR4A1-214ENST00000550339 SMG6Q86US8 1419 aaKnown RBP16.07■□□□□ 0.16
NR4A1-214ENST00000550339 LMO7Q8WWI1 1683 aa16.07■□□□□ 0.16
NR4A1-214ENST00000550339 CDK12Q9NYV4 1490 aaPredicted RBP16.06■□□□□ 0.16
NR4A1-214ENST00000550339 BLMP54132 1417 aaPredicted RBP16.06■□□□□ 0.16
NR4A1-214ENST00000550339 INSRP06213 1382 aa16.06■□□□□ 0.16
NR4A1-214ENST00000550339 FNBP4Q8N3X1 1017 aaPredicted RBP16.06■□□□□ 0.16
NR4A1-214ENST00000550339 SLIT2O94813 1529 aa16.05■□□□□ 0.16
NR4A1-214ENST00000550339 MIER1Q8N108 512 aa16.05■□□□□ 0.16
NR4A1-214ENST00000550339 CCDC9Q9Y3X0 531 aaKnown RBP16.05■□□□□ 0.16
NR4A1-214ENST00000550339 ABCC6O95255 1503 aa16.04■□□□□ 0.16
NR4A1-214ENST00000550339 COL5A2P05997 1499 aaPredicted RBP16.04■□□□□ 0.16
NR4A1-214ENST00000550339 EIF4A2Q14240 407 aaKnown RBP16.04■□□□□ 0.16
NR4A1-214ENST00000550339 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
NR4A1-214ENST00000550339 UNC5CLQ8IV45 518 aa16.04■□□□□ 0.16
NR4A1-214ENST00000550339 NWD2Q9ULI1 1742 aa16.04■□□□□ 0.16
NR4A1-214ENST00000550339 ERBB3P21860 1342 aa16.03■□□□□ 0.16
NR4A1-214ENST00000550339 DIAPH1O60610 1272 aaKnown RBP16.03■□□□□ 0.16
NR4A1-214ENST00000550339 CCDC184Q52MB2 194 aa16.03■□□□□ 0.16
NR4A1-214ENST00000550339 TOM1L2Q6ZVM7 507 aa16.03■□□□□ 0.16
NR4A1-214ENST00000550339 NLRP2Q9NX02 1062 aa16.03■□□□□ 0.16
NR4A1-214ENST00000550339 BCL9LQ86UU0 1499 aa16.03■□□□□ 0.16
NR4A1-214ENST00000550339 USP35Q9P2H5 1018 aa16.02■□□□□ 0.16
NR4A1-214ENST00000550339 NRAPQ86VF7 1730 aa16.02■□□□□ 0.15
NR4A1-214ENST00000550339 WDR17Q8IZU2 1322 aa16.01■□□□□ 0.15
NR4A1-214ENST00000550339 RGPD2P0DJD1 1756 aa16.01■□□□□ 0.15
NR4A1-214ENST00000550339 U2SURPO15042 1029 aaKnown RBP16.01■□□□□ 0.15
NR4A1-214ENST00000550339 USHBP1Q8N6Y0 703 aa16.01■□□□□ 0.15
NR4A1-214ENST00000550339 MRS2Q9HD23 443 aa16.01■□□□□ 0.15
NR4A1-214ENST00000550339 COL3A1P02461 1466 aaPredicted RBP16■□□□□ 0.15
NR4A1-214ENST00000550339 IL13P35225 146 aa16■□□□□ 0.15
NR4A1-214ENST00000550339 NBPF6Q5VWK0 638 aa16■□□□□ 0.15
NR4A1-214ENST00000550339 NBPF4Q96M43 638 aa16■□□□□ 0.15
NR4A1-214ENST00000550339 QTRT2Q9H974 415 aaKnown RBP16■□□□□ 0.15
NR4A1-214ENST00000550339 ZNF772Q68DY9 489 aaPredicted RBP15.99■□□□□ 0.15
NR4A1-214ENST00000550339 EYA1Q99502 592 aa15.99■□□□□ 0.15
NR4A1-214ENST00000550339 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
NR4A1-214ENST00000550339 CRB1P82279 1406 aa15.98■□□□□ 0.15
NR4A1-214ENST00000550339 VPS72Q15906 364 aa15.98■□□□□ 0.15
NR4A1-214ENST00000550339 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.98■□□□□ 0.15
NR4A1-214ENST00000550339 TRPC5Q9UL62 973 aaPredicted RBP15.98■□□□□ 0.15
NR4A1-214ENST00000550339 RGS17Q9UGC6 210 aaPredicted RBP15.97■□□□□ 0.15
NR4A1-214ENST00000550339 SPATA31A5Q5VU36 1347 aa15.96■□□□□ 0.15
NR4A1-214ENST00000550339 SPATA31A7Q8IWB4 1347 aa15.96■□□□□ 0.15
NR4A1-214ENST00000550339 FAM208AQ9UK61 1670 aaKnown RBP15.96■□□□□ 0.15
NR4A1-214ENST00000550339 HMOX1P09601 288 aa15.96■□□□□ 0.15
NR4A1-214ENST00000550339 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.15
NR4A1-214ENST00000550339 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.15
NR4A1-214ENST00000550339 CARD10Q9BWT7 1032 aa15.96■□□□□ 0.15
NR4A1-214ENST00000550339 SPATA31A1Q5TZJ5 1347 aa15.95■□□□□ 0.14
NR4A1-214ENST00000550339 ATRNO75882 1429 aa15.95■□□□□ 0.14
NR4A1-214ENST00000550339 WDR43Q15061 677 aaKnown RBP eCLIP15.95■□□□□ 0.14
NR4A1-214ENST00000550339 SULT6B1Q6IMI4 303 aa15.95■□□□□ 0.14
NR4A1-214ENST00000550339 GJD4Q96KN9 370 aaPredicted RBP15.95■□□□□ 0.14
NR4A1-214ENST00000550339 IGSF1Q8N6C5 1336 aa15.94■□□□□ 0.14
NR4A1-214ENST00000550339 CCER2I3L3R5 266 aa15.94■□□□□ 0.14
NR4A1-214ENST00000550339 AEBP1Q8IUX7 1158 aa15.94■□□□□ 0.14
NR4A1-214ENST00000550339 TCP11L2Q8N4U5 519 aa15.94■□□□□ 0.14
NR4A1-214ENST00000550339 A0A0G2JS52 829 aa15.93■□□□□ 0.14
NR4A1-214ENST00000550339 MYT1Q01538 1121 aa15.93■□□□□ 0.14
NR4A1-214ENST00000550339 FAM98CQ17RN3 349 aaKnown RBP15.93■□□□□ 0.14
NR4A1-214ENST00000550339 POTEAQ6S8J7 498 aa15.93■□□□□ 0.14
NR4A1-214ENST00000550339 RGPD1P0DJD0 1748 aa15.92■□□□□ 0.14
NR4A1-214ENST00000550339 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
NR4A1-214ENST00000550339 RAPGEF4Q8WZA2 1011 aa15.91■□□□□ 0.14
NR4A1-214ENST00000550339 GLI3P10071 1580 aa15.91■□□□□ 0.14
NR4A1-214ENST00000550339 IL2RBP14784 551 aa15.9■□□□□ 0.14
NR4A1-214ENST00000550339 RXRBP28702 533 aa15.9■□□□□ 0.14
NR4A1-214ENST00000550339 RBM6P78332 1123 aaKnown RBP15.9■□□□□ 0.14
NR4A1-214ENST00000550339 PNISRQ8TF01 805 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms