RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 NUTM2AQ8IVF1 878 aaPredicted RBP10.89□□□□□ -0.67
GPN3-207ENST00000550228 PNISRQ8TF01 805 aaKnown RBP10.89□□□□□ -0.67
GPN3-207ENST00000550228 LTV1Q96GA3 475 aaPredicted RBP10.89□□□□□ -0.67
GPN3-207ENST00000550228 YTHDC1Q96MU7 727 aaKnown RBP10.89□□□□□ -0.67
GPN3-207ENST00000550228 JCADQ9P266 1359 aa10.89□□□□□ -0.67
GPN3-207ENST00000550228 U2SURPO15042 1029 aaKnown RBP10.88□□□□□ -0.67
GPN3-207ENST00000550228 IP6K1Q92551 441 aa10.88□□□□□ -0.67
GPN3-207ENST00000550228 PRDM11Q9NQV5 511 aa10.88□□□□□ -0.67
GPN3-207ENST00000550228 INSRP06213 1382 aa10.88□□□□□ -0.67
GPN3-207ENST00000550228 KIF24Q5T7B8 1368 aa10.88□□□□□ -0.67
GPN3-207ENST00000550228 COL18A1P39060 1754 aa10.88□□□□□ -0.67
GPN3-207ENST00000550228 EIF4A2Q14240 407 aaKnown RBP10.87□□□□□ -0.67
GPN3-207ENST00000550228 NUDCQ9Y266 331 aa10.87□□□□□ -0.67
GPN3-207ENST00000550228 RGPD2P0DJD1 1756 aa10.87□□□□□ -0.67
GPN3-207ENST00000550228 CPDO75976 1380 aa10.87□□□□□ -0.67
GPN3-207ENST00000550228 ADAMTS2O95450 1211 aa10.86□□□□□ -0.67
GPN3-207ENST00000550228 U2AF1L5P0DN76 240 aaPredicted RBP10.86□□□□□ -0.67
GPN3-207ENST00000550228 IL13P35225 146 aa10.86□□□□□ -0.67
GPN3-207ENST00000550228 U2AF1Q01081 240 aaKnown RBP eCLIP10.86□□□□□ -0.67
GPN3-207ENST00000550228 LMO7Q8WWI1 1683 aa10.85□□□□□ -0.67
GPN3-207ENST00000550228 COL14A1Q05707 1796 aaKnown RBP10.85□□□□□ -0.67
GPN3-207ENST00000550228 BLMP54132 1417 aaPredicted RBP10.85□□□□□ -0.67
GPN3-207ENST00000550228 ABCC6O95255 1503 aa10.85□□□□□ -0.67
GPN3-207ENST00000550228 SENP3-EIF4A1A0A087X0R7 540 aa10.85□□□□□ -0.67
GPN3-207ENST00000550228 ADAMTS8Q9UP79 889 aa10.85□□□□□ -0.67
GPN3-207ENST00000550228 AXIN2Q9Y2T1 843 aa10.85□□□□□ -0.67
GPN3-207ENST00000550228 PLCH1Q4KWH8 1693 aa10.85□□□□□ -0.67
GPN3-207ENST00000550228 RGPD1P0DJD0 1748 aa10.84□□□□□ -0.67
GPN3-207ENST00000550228 CCDC146Q8IYE0 955 aa10.84□□□□□ -0.67
GPN3-207ENST00000550228 ANKRD24Q8TF21 1146 aa10.84□□□□□ -0.67
GPN3-207ENST00000550228 CAMTA1Q9Y6Y1 1673 aa10.83□□□□□ -0.68
GPN3-207ENST00000550228 FAM83GA6ND36 823 aa10.83□□□□□ -0.68
GPN3-207ENST00000550228 HMOX1P09601 288 aa10.83□□□□□ -0.68
GPN3-207ENST00000550228 CSB-PGBD3P0DP91 1061 aa10.83□□□□□ -0.68
GPN3-207ENST00000550228 LRP6O75581 1613 aa10.83□□□□□ -0.68
GPN3-207ENST00000550228 FAM208AQ9UK61 1670 aaKnown RBP10.82□□□□□ -0.68
GPN3-207ENST00000550228 AEBP1Q8IUX7 1158 aa10.82□□□□□ -0.68
GPN3-207ENST00000550228 USHBP1Q8N6Y0 703 aa10.82□□□□□ -0.68
GPN3-207ENST00000550228 STRN4Q9NRL3 753 aa10.82□□□□□ -0.68
GPN3-207ENST00000550228 ERBB3P21860 1342 aa10.82□□□□□ -0.68
GPN3-207ENST00000550228 SPATA31A6Q5VVP1 1343 aa10.82□□□□□ -0.68
GPN3-207ENST00000550228 HNRNPUQ00839 825 aaKnown RBP eCLIP10.81□□□□□ -0.68
GPN3-207ENST00000550228 MEX3CQ5U5Q3 659 aaKnown RBP10.81□□□□□ -0.68
GPN3-207ENST00000550228 SULT6B1Q6IMI4 303 aa10.81□□□□□ -0.68
GPN3-207ENST00000550228 FBXO41Q8TF61 875 aa10.81□□□□□ -0.68
GPN3-207ENST00000550228 EYA1Q99502 592 aa10.81□□□□□ -0.68
GPN3-207ENST00000550228 NLRP2Q9NX02 1062 aa10.81□□□□□ -0.68
GPN3-207ENST00000550228 IGSF1Q8N6C5 1336 aa10.81□□□□□ -0.68
GPN3-207ENST00000550228 COL5A2P05997 1499 aaPredicted RBP10.81□□□□□ -0.68
GPN3-207ENST00000550228 PRKAR2BP31323 418 aa10.8□□□□□ -0.68
GPN3-207ENST00000550228 EVA1CP58658 441 aa10.8□□□□□ -0.68
GPN3-207ENST00000550228 NBPF6Q5VWK0 638 aa10.8□□□□□ -0.68
GPN3-207ENST00000550228 NBPF4Q96M43 638 aa10.8□□□□□ -0.68
GPN3-207ENST00000550228 C8orf37Q96NL8 207 aa10.8□□□□□ -0.68
GPN3-207ENST00000550228 RSPH6AQ9H0K4 717 aa10.8□□□□□ -0.68
GPN3-207ENST00000550228 BTG4Q9NY30 223 aa10.8□□□□□ -0.68
GPN3-207ENST00000550228 NRAPQ86VF7 1730 aa10.8□□□□□ -0.68
GPN3-207ENST00000550228 NWD2Q9ULI1 1742 aa10.79□□□□□ -0.68
GPN3-207ENST00000550228 RUNDC1Q96C34 613 aa10.79□□□□□ -0.68
GPN3-207ENST00000550228 SALL2Q9Y467 1007 aaPredicted RBP10.79□□□□□ -0.68
GPN3-207ENST00000550228 MAPK8IP3Q9UPT6 1336 aa10.79□□□□□ -0.68
GPN3-207ENST00000550228 FCHSD2O94868 740 aa10.78□□□□□ -0.68
GPN3-207ENST00000550228 NEFMP07197 916 aa10.78□□□□□ -0.68
GPN3-207ENST00000550228 TOM1L2Q6ZVM7 507 aa10.78□□□□□ -0.68
GPN3-207ENST00000550228 WDR17Q8IZU2 1322 aa10.78□□□□□ -0.68
GPN3-207ENST00000550228 APAF1O14727 1248 aa10.77□□□□□ -0.69
GPN3-207ENST00000550228 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.69
GPN3-207ENST00000550228 NGLY1Q96IV0 654 aa10.77□□□□□ -0.69
GPN3-207ENST00000550228 PNNQ9H307 717 aaKnown RBP10.77□□□□□ -0.69
GPN3-207ENST00000550228 RRP7AQ9Y3A4 280 aaKnown RBP10.77□□□□□ -0.69
GPN3-207ENST00000550228 KDRP35968 1356 aa10.77□□□□□ -0.69
GPN3-207ENST00000550228 SLIT2O94813 1529 aa10.76□□□□□ -0.69
GPN3-207ENST00000550228 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
GPN3-207ENST00000550228 PLEKHF1Q96S99 279 aa10.76□□□□□ -0.69
GPN3-207ENST00000550228 CRB1P82279 1406 aa10.75□□□□□ -0.69
GPN3-207ENST00000550228 NCAPD2Q15021 1401 aa10.75□□□□□ -0.69
GPN3-207ENST00000550228 TCP11L2Q8N4U5 519 aa10.75□□□□□ -0.69
GPN3-207ENST00000550228 PHACTR3Q96KR7 559 aa10.75□□□□□ -0.69
GPN3-207ENST00000550228 USP35Q9P2H5 1018 aa10.75□□□□□ -0.69
GPN3-207ENST00000550228 DLG5Q8TDM6 1919 aa10.75□□□□□ -0.69
GPN3-207ENST00000550228 CARD10Q9BWT7 1032 aa10.74□□□□□ -0.69
GPN3-207ENST00000550228 CCDC9Q9Y3X0 531 aaKnown RBP10.74□□□□□ -0.69
GPN3-207ENST00000550228 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.74□□□□□ -0.69
GPN3-207ENST00000550228 PARP4Q9UKK3 1724 aaKnown RBP10.74□□□□□ -0.69
GPN3-207ENST00000550228 WNK3Q9BYP7 1800 aa10.74□□□□□ -0.69
GPN3-207ENST00000550228 MEGF6O75095 1541 aa10.74□□□□□ -0.69
GPN3-207ENST00000550228 TATP17735 454 aaPredicted RBP10.73□□□□□ -0.69
GPN3-207ENST00000550228 TMPOP42166 694 aaKnown RBP10.73□□□□□ -0.69
GPN3-207ENST00000550228 RAPGEF4Q8WZA2 1011 aa10.73□□□□□ -0.69
GPN3-207ENST00000550228 AFF2P51816 1311 aa10.73□□□□□ -0.69
GPN3-207ENST00000550228 RIPK4P57078 832 aa10.72□□□□□ -0.69
GPN3-207ENST00000550228 NFE2L2Q16236 605 aa10.72□□□□□ -0.69
GPN3-207ENST00000550228 UNC5CLQ8IV45 518 aa10.72□□□□□ -0.69
GPN3-207ENST00000550228 USP21Q9UK80 565 aa10.72□□□□□ -0.69
GPN3-207ENST00000550228 ZBED9Q6R2W3 1325 aa10.72□□□□□ -0.69
GPN3-207ENST00000550228 BCL9LQ86UU0 1499 aa10.72□□□□□ -0.69
GPN3-207ENST00000550228 MTHFSDQ2M296 383 aaKnown RBP10.71□□□□□ -0.69
GPN3-207ENST00000550228 PLEKHO1Q53GL0 409 aaPredicted RBP10.71□□□□□ -0.69
GPN3-207ENST00000550228 PKD1L3Q7Z443 1732 aa10.71□□□□□ -0.69
GPN3-207ENST00000550228 FNBP4Q8N3X1 1017 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms