RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 WDR17Q8IZU2 1322 aa19.03■□□□□ 0.64
GCN1-206ENST00000549815 LRRC37A3O60309 1634 aa19.03■□□□□ 0.64
GCN1-206ENST00000549815 ABCC6O95255 1503 aa19.02■□□□□ 0.64
GCN1-206ENST00000549815 ST20-MTHFSA0A0A6YYL1 179 aa19.02■□□□□ 0.64
GCN1-206ENST00000549815 TRIM37O94972 964 aa19.02■□□□□ 0.64
GCN1-206ENST00000549815 PEAK1Q9H792 1746 aa19.02■□□□□ 0.63
GCN1-206ENST00000549815 SOX12O15370 315 aa19.01■□□□□ 0.63
GCN1-206ENST00000549815 NME9Q86XW9 330 aa19.01■□□□□ 0.63
GCN1-206ENST00000549815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.01■□□□□ 0.63
GCN1-206ENST00000549815 TMC1Q8TDI8 760 aa19.01■□□□□ 0.63
GCN1-206ENST00000549815 A0A1W2PP64 1363 aa19.01■□□□□ 0.63
GCN1-206ENST00000549815 EDC4Q6P2E9 1401 aaKnown RBP19■□□□□ 0.63
GCN1-206ENST00000549815 EZH2Q15910 746 aaKnown RBP19■□□□□ 0.63
GCN1-206ENST00000549815 TOM1L2Q6ZVM7 507 aa19■□□□□ 0.63
GCN1-206ENST00000549815 CAMKK2Q96RR4 588 aa19■□□□□ 0.63
GCN1-206ENST00000549815 HDGFL2Q7Z4V5 671 aaPredicted RBP18.99■□□□□ 0.63
GCN1-206ENST00000549815 RREB1Q92766 1687 aa18.98■□□□□ 0.63
GCN1-206ENST00000549815 LTN1O94822 1766 aa18.97■□□□□ 0.63
GCN1-206ENST00000549815 CARD10Q9BWT7 1032 aa18.97■□□□□ 0.63
GCN1-206ENST00000549815 OVOS2A0A0J9YW53 1432 aa18.97■□□□□ 0.63
GCN1-206ENST00000549815 OVOS2Q6IE36 1432 aa18.97■□□□□ 0.63
GCN1-206ENST00000549815 SBF2Q86WG5 1849 aa18.97■□□□□ 0.63
GCN1-206ENST00000549815 LRP5O75197 1615 aa18.96■□□□□ 0.63
GCN1-206ENST00000549815 NINLQ9Y2I6 1382 aa18.96■□□□□ 0.63
GCN1-206ENST00000549815 PSDA5PKW4 1024 aaPredicted RBP18.96■□□□□ 0.63
GCN1-206ENST00000549815 APBA3O96018 575 aa18.96■□□□□ 0.63
GCN1-206ENST00000549815 TERF2IPQ9NYB0 399 aa18.96■□□□□ 0.63
GCN1-206ENST00000549815 PARD3Q8TEW0 1356 aa18.95■□□□□ 0.62
GCN1-206ENST00000549815 OVOS2A0A0G2JMS6 1433 aa18.95■□□□□ 0.62
GCN1-206ENST00000549815 DDB1Q16531 1140 aa18.95■□□□□ 0.62
GCN1-206ENST00000549815 C11orf95C9JLR9 678 aaPredicted RBP18.94■□□□□ 0.62
GCN1-206ENST00000549815 SLC24A1O60721 1099 aa18.94■□□□□ 0.62
GCN1-206ENST00000549815 NUP188Q5SRE5 1749 aa18.94■□□□□ 0.62
GCN1-206ENST00000549815 USP47Q96K76 1375 aa18.93■□□□□ 0.62
GCN1-206ENST00000549815 CDCA7Q9BWT1 371 aaPredicted RBP18.93■□□□□ 0.62
GCN1-206ENST00000549815 ERBB3P21860 1342 aa18.93■□□□□ 0.62
GCN1-206ENST00000549815 BCL9O00512 1426 aa18.92■□□□□ 0.62
GCN1-206ENST00000549815 CSB-PGBD3P0DP91 1061 aa18.92■□□□□ 0.62
GCN1-206ENST00000549815 MARCH10Q8NA82 808 aaPredicted RBP18.92■□□□□ 0.62
GCN1-206ENST00000549815 CCDC7Q96M83 1385 aa18.92■□□□□ 0.62
GCN1-206ENST00000549815 RGPD3A6NKT7 1758 aaPredicted RBP18.91■□□□□ 0.62
GCN1-206ENST00000549815 RGPD4Q7Z3J3 1758 aa18.91■□□□□ 0.62
GCN1-206ENST00000549815 R3HDM1Q15032 1099 aaKnown RBP18.9■□□□□ 0.62
GCN1-206ENST00000549815 ANKRD36BQ8N2N9 1353 aa18.9■□□□□ 0.62
GCN1-206ENST00000549815 TIMELESSQ9UNS1 1208 aa18.89■□□□□ 0.61
GCN1-206ENST00000549815 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
GCN1-206ENST00000549815 PTF1AQ7RTS3 328 aa18.88■□□□□ 0.61
GCN1-206ENST00000549815 TMF1P82094 1093 aa18.87■□□□□ 0.61
GCN1-206ENST00000549815 TNS2Q63HR2 1409 aa18.87■□□□□ 0.61
GCN1-206ENST00000549815 EXOC5O00471 708 aa18.86■□□□□ 0.61
GCN1-206ENST00000549815 ANKRD24Q8TF21 1146 aa18.86■□□□□ 0.61
GCN1-206ENST00000549815 BCL11BQ9C0K0 894 aaPredicted RBP18.86■□□□□ 0.61
GCN1-206ENST00000549815 PLSCR1O15162 318 aa18.85■□□□□ 0.61
GCN1-206ENST00000549815 IP6K1Q92551 441 aa18.85■□□□□ 0.61
GCN1-206ENST00000549815 NLRP2Q9NX02 1062 aa18.84■□□□□ 0.61
GCN1-206ENST00000549815 MYOM1P52179 1685 aa18.83■□□□□ 0.61
GCN1-206ENST00000549815 FAM208AQ9UK61 1670 aaKnown RBP18.83■□□□□ 0.61
GCN1-206ENST00000549815 COG3Q96JB2 828 aa18.83■□□□□ 0.6
GCN1-206ENST00000549815 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.6
GCN1-206ENST00000549815 MAP3K19Q56UN5 1328 aa18.82■□□□□ 0.6
GCN1-206ENST00000549815 FBLN1P23142 703 aa18.82■□□□□ 0.6
GCN1-206ENST00000549815 FYB1O15117 783 aa18.81■□□□□ 0.6
GCN1-206ENST00000549815 IL2RBP14784 551 aa18.81■□□□□ 0.6
GCN1-206ENST00000549815 NBPF14Q5TI25 921 aa18.81■□□□□ 0.6
GCN1-206ENST00000549815 NHSQ6T4R5 1651 aa18.81■□□□□ 0.6
GCN1-206ENST00000549815 PROM2Q8N271 834 aa18.8■□□□□ 0.6
GCN1-206ENST00000549815 KIF20BQ96Q89 1820 aa18.79■□□□□ 0.6
GCN1-206ENST00000549815 HOXC9P31274 260 aa18.79■□□□□ 0.6
GCN1-206ENST00000549815 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
GCN1-206ENST00000549815 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
GCN1-206ENST00000549815 GGNBP2Q9H3C7 697 aa18.78■□□□□ 0.6
GCN1-206ENST00000549815 KCNQ2O43526 872 aa18.77■□□□□ 0.6
GCN1-206ENST00000549815 ANO8Q9HCE9 1232 aaPredicted RBP18.77■□□□□ 0.6
GCN1-206ENST00000549815 RTL1A6NKG5 1358 aa18.77■□□□□ 0.6
GCN1-206ENST00000549815 LTV1Q96GA3 475 aaPredicted RBP18.76■□□□□ 0.59
GCN1-206ENST00000549815 CARD14Q9BXL6 1004 aa18.76■□□□□ 0.59
GCN1-206ENST00000549815 AMPHP49418 695 aa18.75■□□□□ 0.59
GCN1-206ENST00000549815 RRS1Q15050 365 aaKnown RBP18.75■□□□□ 0.59
GCN1-206ENST00000549815 CASZ1Q86V15 1759 aa18.74■□□□□ 0.59
GCN1-206ENST00000549815 SHANK3Q9BYB0 1731 aa18.74■□□□□ 0.59
GCN1-206ENST00000549815 TXNRD1Q16881 649 aa18.73■□□□□ 0.59
GCN1-206ENST00000549815 ACSBG1Q96GR2 724 aa18.73■□□□□ 0.59
GCN1-206ENST00000549815 BTAF1O14981 1849 aa18.72■□□□□ 0.59
GCN1-206ENST00000549815 NSD3Q9BZ95 1437 aa18.72■□□□□ 0.59
GCN1-206ENST00000549815 MEGF6O75095 1541 aa18.71■□□□□ 0.59
GCN1-206ENST00000549815 NBPF6Q5VWK0 638 aa18.7■□□□□ 0.58
GCN1-206ENST00000549815 NBPF4Q96M43 638 aa18.7■□□□□ 0.58
GCN1-206ENST00000549815 PAPPAQ13219 1627 aa18.7■□□□□ 0.58
GCN1-206ENST00000549815 KIF24Q5T7B8 1368 aa18.69■□□□□ 0.58
GCN1-206ENST00000549815 INSRP06213 1382 aa18.68■□□□□ 0.58
GCN1-206ENST00000549815 HSP90AB2PQ58FF8 381 aa18.68■□□□□ 0.58
GCN1-206ENST00000549815 FLT4P35916 1363 aa18.68■□□□□ 0.58
GCN1-206ENST00000549815 ANKRD26Q9UPS8 1709 aa18.67■□□□□ 0.58
GCN1-206ENST00000549815 DDX54Q8TDD1 881 aaKnown RBP18.67■□□□□ 0.58
GCN1-206ENST00000549815 PDGFDQ9GZP0 370 aaPredicted RBP18.67■□□□□ 0.58
GCN1-206ENST00000549815 SPON1Q9HCB6 807 aa18.67■□□□□ 0.58
GCN1-206ENST00000549815 KAT6BQ8WYB5 2073 aa18.67■□□□□ 0.58
GCN1-206ENST00000549815 DOT1LQ8TEK3 1739 aa18.66■□□□□ 0.58
GCN1-206ENST00000549815 SLC15A2Q16348 729 aa18.66■□□□□ 0.58
GCN1-206ENST00000549815 HSPA5P11021 654 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms