RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 MEIOBQ8N635 442 aa10.05□□□□□ -0.8
ATP2B1-206ENST00000549727 H3BM21 787 aa10.04□□□□□ -0.8
ATP2B1-206ENST00000549727 USP17L8P0C7I0 530 aa10.04□□□□□ -0.8
ATP2B1-206ENST00000549727 CCDC116Q8IYX3 515 aa10.04□□□□□ -0.8
ATP2B1-206ENST00000549727 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
ATP2B1-206ENST00000549727 PPP1R26Q5T8A7 1209 aaPredicted RBP10.03□□□□□ -0.8
ATP2B1-206ENST00000549727 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
ATP2B1-206ENST00000549727 KCTD15Q96SI1 283 aaPredicted RBP10.02□□□□□ -0.81
ATP2B1-206ENST00000549727 TRIM34Q9BYJ4 488 aa10.02□□□□□ -0.81
ATP2B1-206ENST00000549727 BMP2P12643 396 aa10.01□□□□□ -0.81
ATP2B1-206ENST00000549727 ADAM32Q8TC27 787 aa10.01□□□□□ -0.81
ATP2B1-206ENST00000549727 SLC16A10Q8TF71 515 aa10.01□□□□□ -0.81
ATP2B1-206ENST00000549727 SOS2Q07890 1332 aaPredicted RBP10□□□□□ -0.81
ATP2B1-206ENST00000549727 NEUROD2Q15784 382 aa10□□□□□ -0.81
ATP2B1-206ENST00000549727 ZBTB33Q86T24 672 aa10□□□□□ -0.81
ATP2B1-206ENST00000549727 NPAS3Q8IXF0 933 aa10□□□□□ -0.81
ATP2B1-206ENST00000549727 DNMT3LQ9UJW3 386 aa10□□□□□ -0.81
ATP2B1-206ENST00000549727 EMILIN1Q9Y6C2 1016 aa10□□□□□ -0.81
ATP2B1-206ENST00000549727 INTS6LQ5JSJ4 861 aaKnown RBP9.99□□□□□ -0.81
ATP2B1-206ENST00000549727 BRPF1P55201 1214 aaPredicted RBP9.99□□□□□ -0.81
ATP2B1-206ENST00000549727 Q6ZVU0 165 aa9.99□□□□□ -0.81
ATP2B1-206ENST00000549727 MAN1A2O60476 641 aa9.98□□□□□ -0.81
ATP2B1-206ENST00000549727 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
ATP2B1-206ENST00000549727 TMPRSS4Q9NRS4 437 aa9.98□□□□□ -0.81
ATP2B1-206ENST00000549727 ZC3H4Q9UPT8 1303 aaKnown RBP9.97□□□□□ -0.81
ATP2B1-206ENST00000549727 INSM1Q01101 510 aaPredicted RBP9.97□□□□□ -0.81
ATP2B1-206ENST00000549727 PTK2Q05397 1052 aa9.97□□□□□ -0.81
ATP2B1-206ENST00000549727 IRF7Q92985 503 aa9.97□□□□□ -0.81
ATP2B1-206ENST00000549727 SLC10A4Q96EP9 437 aa9.97□□□□□ -0.81
ATP2B1-206ENST00000549727 AGBL1Q96MI9 1066 aa9.97□□□□□ -0.81
ATP2B1-206ENST00000549727 GJD4Q96KN9 370 aaPredicted RBP9.96□□□□□ -0.82
ATP2B1-206ENST00000549727 FIGNL2A6NMB9 653 aa9.95□□□□□ -0.82
ATP2B1-206ENST00000549727 PPFIA3O75145 1194 aa9.95□□□□□ -0.82
ATP2B1-206ENST00000549727 TSEN34Q9BSV6 310 aaKnown RBP9.95□□□□□ -0.82
ATP2B1-206ENST00000549727 ADD1P35611 737 aaKnown RBP9.94□□□□□ -0.82
ATP2B1-206ENST00000549727 PCMTD1Q96MG8 357 aaPredicted RBP9.94□□□□□ -0.82
ATP2B1-206ENST00000549727 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
ATP2B1-206ENST00000549727 KDF1Q8NAX2 398 aaPredicted RBP9.93□□□□□ -0.82
ATP2B1-206ENST00000549727 STK17AQ9UEE5 414 aa9.93□□□□□ -0.82
ATP2B1-206ENST00000549727 UPP2O95045 317 aa9.92□□□□□ -0.82
ATP2B1-206ENST00000549727 RAB15P59190 212 aa9.92□□□□□ -0.82
ATP2B1-206ENST00000549727 TTLL8A6PVC2 850 aa9.91□□□□□ -0.82
ATP2B1-206ENST00000549727 SPINT1O43278 529 aa9.91□□□□□ -0.82
ATP2B1-206ENST00000549727 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
ATP2B1-206ENST00000549727 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
ATP2B1-206ENST00000549727 CDV3Q9UKY7 258 aaKnown RBP9.91□□□□□ -0.82
ATP2B1-206ENST00000549727 ESPNB1AK53 854 aa9.9□□□□□ -0.82
ATP2B1-206ENST00000549727 ERVH48-1M5A8F1 160 aa9.9□□□□□ -0.82
ATP2B1-206ENST00000549727 LILRA1O75019 489 aa9.9□□□□□ -0.82
ATP2B1-206ENST00000549727 VSIG8P0DPA2 414 aa9.9□□□□□ -0.82
ATP2B1-206ENST00000549727 CTSOP43234 321 aaPredicted RBP9.9□□□□□ -0.82
ATP2B1-206ENST00000549727 ZNF784Q8NCA9 323 aaPredicted RBP9.9□□□□□ -0.82
ATP2B1-206ENST00000549727 RELBQ01201 579 aa9.9□□□□□ -0.83
ATP2B1-206ENST00000549727 TMEM259Q4ZIN3 620 aa9.9□□□□□ -0.83
ATP2B1-206ENST00000549727 ZNF395Q9H8N7 513 aaPredicted RBP9.9□□□□□ -0.83
ATP2B1-206ENST00000549727 GPR37L1O60883 481 aa9.89□□□□□ -0.83
ATP2B1-206ENST00000549727 DZIP3Q86Y13 1208 aaKnown RBP9.89□□□□□ -0.83
ATP2B1-206ENST00000549727 INSM2Q96T92 566 aaPredicted RBP9.89□□□□□ -0.83
ATP2B1-206ENST00000549727 PTSQ03393 145 aa9.88□□□□□ -0.83
ATP2B1-206ENST00000549727 FBXO45P0C2W1 286 aa9.87□□□□□ -0.83
ATP2B1-206ENST00000549727 DHX9Q08211 1270 aaKnown RBP9.87□□□□□ -0.83
ATP2B1-206ENST00000549727 ZSCAN1Q8NBB4 408 aa9.87□□□□□ -0.83
ATP2B1-206ENST00000549727 GIGYF1O75420 1035 aaPredicted RBP9.86□□□□□ -0.83
ATP2B1-206ENST00000549727 KRT76Q01546 638 aa9.86□□□□□ -0.83
ATP2B1-206ENST00000549727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.86□□□□□ -0.83
ATP2B1-206ENST00000549727 TPRNQ4KMQ1 711 aa9.85□□□□□ -0.83
ATP2B1-206ENST00000549727 SNRKQ9NRH2 765 aa9.85□□□□□ -0.83
ATP2B1-206ENST00000549727 SLC35F4A4IF30 521 aa9.83□□□□□ -0.84
ATP2B1-206ENST00000549727 NBPF20Q3BBV1 942 aa9.83□□□□□ -0.84
ATP2B1-206ENST00000549727 ZBBXA8MT70 800 aa9.82□□□□□ -0.84
ATP2B1-206ENST00000549727 ADH1AP07327 375 aa9.82□□□□□ -0.84
ATP2B1-206ENST00000549727 FOXD4L5Q5VV16 416 aaPredicted RBP9.82□□□□□ -0.84
ATP2B1-206ENST00000549727 MTMR14Q8NCE2 650 aa9.82□□□□□ -0.84
ATP2B1-206ENST00000549727 CYLDQ9NQC7 956 aa9.82□□□□□ -0.84
ATP2B1-206ENST00000549727 SENP3-EIF4A1A0A087X0R7 540 aa9.82□□□□□ -0.84
ATP2B1-206ENST00000549727 CCDC155Q8N6L0 562 aa9.82□□□□□ -0.84
ATP2B1-206ENST00000549727 PNMA1Q8ND90 353 aa9.82□□□□□ -0.84
ATP2B1-206ENST00000549727 RNF217Q8TC41 542 aa9.82□□□□□ -0.84
ATP2B1-206ENST00000549727 PCDHB9Q9Y5E1 797 aa9.82□□□□□ -0.84
ATP2B1-206ENST00000549727 PTGIRP43119 386 aa9.81□□□□□ -0.84
ATP2B1-206ENST00000549727 POLMQ9NP87 494 aaPredicted RBP9.8□□□□□ -0.84
ATP2B1-206ENST00000549727 RNFT1Q5M7Z0 435 aa9.77□□□□□ -0.85
ATP2B1-206ENST00000549727 BANK1Q8NDB2 785 aa9.77□□□□□ -0.85
ATP2B1-206ENST00000549727 NANOS1Q8WY41 292 aaKnown RBP9.77□□□□□ -0.85
ATP2B1-206ENST00000549727 SCTRP47872 440 aa9.76□□□□□ -0.85
ATP2B1-206ENST00000549727 SEPT12Q8IYM1 358 aa9.76□□□□□ -0.85
ATP2B1-206ENST00000549727 VWA5B2Q8N398 1253 aa9.76□□□□□ -0.85
ATP2B1-206ENST00000549727 CNTNAP3BQ96NU0 1288 aa9.76□□□□□ -0.85
ATP2B1-206ENST00000549727 CNTNAP3Q9BZ76 1288 aa9.76□□□□□ -0.85
ATP2B1-206ENST00000549727 CUEDC1Q9NWM3 386 aaPredicted RBP9.76□□□□□ -0.85
ATP2B1-206ENST00000549727 ITGA6P23229 1130 aa9.75□□□□□ -0.85
ATP2B1-206ENST00000549727 NR1H3Q13133 447 aa9.75□□□□□ -0.85
ATP2B1-206ENST00000549727 COL25A1Q9BXS0 654 aaPredicted RBP9.74□□□□□ -0.85
ATP2B1-206ENST00000549727 PRICKLE2Q7Z3G6 844 aa9.73□□□□□ -0.85
ATP2B1-206ENST00000549727 RHOQP17081 205 aa9.73□□□□□ -0.85
ATP2B1-206ENST00000549727 ERVK-9P63128 1117 aa9.73□□□□□ -0.85
ATP2B1-206ENST00000549727 A0A1W2PRU2 124 aa9.71□□□□□ -0.86
ATP2B1-206ENST00000549727 RNF144AP50876 292 aaPredicted RBP9.71□□□□□ -0.86
ATP2B1-206ENST00000549727 TSGA10IPQ3SY00 556 aa9.71□□□□□ -0.86
ATP2B1-206ENST00000549727 WHAMMQ8TF30 809 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms