RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 AEBP2Q6ZN18 517 aaPredicted RBP29.07■■■□□ 2.24
ATP2B1-206ENST00000549727 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
ATP2B1-206ENST00000549727 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
ATP2B1-206ENST00000549727 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
ATP2B1-206ENST00000549727 FOXD1Q16676 465 aa22.99■■□□□ 1.27
ATP2B1-206ENST00000549727 PLPPR3Q6T4P5 718 aa22.12■■□□□ 1.13
ATP2B1-206ENST00000549727 PPP6R1Q9UPN7 881 aa21.77■■□□□ 1.08
ATP2B1-206ENST00000549727 ADRA2BP18089 450 aa21.65■■□□□ 1.06
ATP2B1-206ENST00000549727 PIAS4Q8N2W9 510 aaPredicted RBP21.44■■□□□ 1.02
ATP2B1-206ENST00000549727 MSH5O43196 834 aa21.23■□□□□ 0.99
ATP2B1-206ENST00000549727 POTEDQ86YR6 584 aa20.53■□□□□ 0.88
ATP2B1-206ENST00000549727 MAPK8IP2Q13387 824 aaPredicted RBP19.88■□□□□ 0.77
ATP2B1-206ENST00000549727 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
ATP2B1-206ENST00000549727 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
ATP2B1-206ENST00000549727 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
ATP2B1-206ENST00000549727 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
ATP2B1-206ENST00000549727 HOXD11P31277 338 aaPredicted RBP18.91■□□□□ 0.62
ATP2B1-206ENST00000549727 RNF216Q9NWF9 866 aaPredicted RBP18.8■□□□□ 0.6
ATP2B1-206ENST00000549727 DCAF8L1A6NGE4 600 aa18.7■□□□□ 0.58
ATP2B1-206ENST00000549727 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
ATP2B1-206ENST00000549727 NPM3O75607 178 aaKnown RBP18.57■□□□□ 0.56
ATP2B1-206ENST00000549727 KCNA4P22459 653 aa18.46■□□□□ 0.55
ATP2B1-206ENST00000549727 RNF39Q9H2S5 420 aa18.25■□□□□ 0.51
ATP2B1-206ENST00000549727 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
ATP2B1-206ENST00000549727 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
ATP2B1-206ENST00000549727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.47
ATP2B1-206ENST00000549727 C1QBPQ07021 282 aaKnown RBP17.9■□□□□ 0.46
ATP2B1-206ENST00000549727 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
ATP2B1-206ENST00000549727 U3KPZ7 1027 aaPredicted RBP17.71■□□□□ 0.43
ATP2B1-206ENST00000549727 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
ATP2B1-206ENST00000549727 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
ATP2B1-206ENST00000549727 CAPN15O75808 1086 aa17.27■□□□□ 0.35
ATP2B1-206ENST00000549727 DSG3P32926 999 aa17.2■□□□□ 0.34
ATP2B1-206ENST00000549727 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
ATP2B1-206ENST00000549727 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
ATP2B1-206ENST00000549727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
ATP2B1-206ENST00000549727 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
ATP2B1-206ENST00000549727 ZBTB22O15209 634 aa17.04■□□□□ 0.32
ATP2B1-206ENST00000549727 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
ATP2B1-206ENST00000549727 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.31
ATP2B1-206ENST00000549727 ABCB7O75027 752 aa16.97■□□□□ 0.31
ATP2B1-206ENST00000549727 ZNF219Q9P2Y4 722 aaPredicted RBP16.95■□□□□ 0.3
ATP2B1-206ENST00000549727 APLP2Q06481 763 aa16.94■□□□□ 0.3
ATP2B1-206ENST00000549727 ATF5Q9Y2D1 282 aaPredicted RBP16.88■□□□□ 0.29
ATP2B1-206ENST00000549727 POLA2Q14181 598 aa16.7■□□□□ 0.26
ATP2B1-206ENST00000549727 ATXN8OSP0DMR3 200 aa16.42■□□□□ 0.22
ATP2B1-206ENST00000549727 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
ATP2B1-206ENST00000549727 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
ATP2B1-206ENST00000549727 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
ATP2B1-206ENST00000549727 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
ATP2B1-206ENST00000549727 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
ATP2B1-206ENST00000549727 POTEHQ6S545 545 aa16.09■□□□□ 0.17
ATP2B1-206ENST00000549727 MKRN4PQ13434 485 aaPredicted RBP16.07■□□□□ 0.16
ATP2B1-206ENST00000549727 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
ATP2B1-206ENST00000549727 FBLN2P98095 1184 aa15.93■□□□□ 0.14
ATP2B1-206ENST00000549727 REM2Q8IYK8 340 aaPredicted RBP15.9■□□□□ 0.14
ATP2B1-206ENST00000549727 CHRDL2Q6WN34 429 aa15.89■□□□□ 0.13
ATP2B1-206ENST00000549727 SPDYE2BA6NHP3 402 aa15.78■□□□□ 0.12
ATP2B1-206ENST00000549727 SPDYE6P0CI01 402 aa15.78■□□□□ 0.12
ATP2B1-206ENST00000549727 SPDYE2Q495Y8 402 aa15.78■□□□□ 0.12
ATP2B1-206ENST00000549727 PITPNM1O00562 1244 aa15.73■□□□□ 0.11
ATP2B1-206ENST00000549727 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
ATP2B1-206ENST00000549727 SSUH2Q9Y2M2 353 aa15.68■□□□□ 0.1
ATP2B1-206ENST00000549727 PIP4P2Q8N4L2 257 aa15.61■□□□□ 0.09
ATP2B1-206ENST00000549727 FXR2P51116 673 aaKnown RBP eCLIP15.55■□□□□ 0.08
ATP2B1-206ENST00000549727 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
ATP2B1-206ENST00000549727 CLEC11AQ9Y240 323 aa15.49■□□□□ 0.07
ATP2B1-206ENST00000549727 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
ATP2B1-206ENST00000549727 PRKAR2AP13861 404 aaKnown RBP15.3■□□□□ 0.04
ATP2B1-206ENST00000549727 SPDYE4A6NLX3 237 aa15.29■□□□□ 0.04
ATP2B1-206ENST00000549727 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
ATP2B1-206ENST00000549727 EVX2Q03828 476 aa15.25■□□□□ 0.03
ATP2B1-206ENST00000549727 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
ATP2B1-206ENST00000549727 HAX1O00165 279 aa15.22■□□□□ 0.03
ATP2B1-206ENST00000549727 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
ATP2B1-206ENST00000549727 C19orf67A6NJJ6 358 aa15.03■□□□□ -0
ATP2B1-206ENST00000549727 PROM2Q8N271 834 aa15□□□□□ -0.01
ATP2B1-206ENST00000549727 CREBZFQ9NS37 354 aa15□□□□□ -0.01
ATP2B1-206ENST00000549727 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
ATP2B1-206ENST00000549727 FARP1Q9Y4F1 1045 aaPredicted RBP14.97□□□□□ -0.01
ATP2B1-206ENST00000549727 MNX1P50219 401 aaPredicted RBP14.81□□□□□ -0.04
ATP2B1-206ENST00000549727 CD44P16070 742 aaKnown RBP14.8□□□□□ -0.04
ATP2B1-206ENST00000549727 FKBP8Q14318 412 aa14.79□□□□□ -0.04
ATP2B1-206ENST00000549727 GABBR2O75899 941 aa14.78□□□□□ -0.04
ATP2B1-206ENST00000549727 ZRANB1Q9UGI0 708 aa14.65□□□□□ -0.06
ATP2B1-206ENST00000549727 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
ATP2B1-206ENST00000549727 POTEIP0CG38 1075 aa14.57□□□□□ -0.08
ATP2B1-206ENST00000549727 MIER1Q8N108 512 aa14.56□□□□□ -0.08
ATP2B1-206ENST00000549727 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
ATP2B1-206ENST00000549727 PHF12Q96QT6 1004 aa14.52□□□□□ -0.08
ATP2B1-206ENST00000549727 GALR2O43603 387 aaPredicted RBP14.49□□□□□ -0.09
ATP2B1-206ENST00000549727 TSPYL2Q9H2G4 693 aaPredicted RBP14.44□□□□□ -0.1
ATP2B1-206ENST00000549727 PAK3O75914 559 aaPredicted RBP14.41□□□□□ -0.1
ATP2B1-206ENST00000549727 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
ATP2B1-206ENST00000549727 RASEFQ8IZ41 740 aa14.41□□□□□ -0.1
ATP2B1-206ENST00000549727 CLCN6P51797 869 aa14.4□□□□□ -0.1
ATP2B1-206ENST00000549727 CCDC61Q9Y6R9 512 aa14.37□□□□□ -0.11
ATP2B1-206ENST00000549727 PLEKHG5O94827 1062 aa14.34□□□□□ -0.11
ATP2B1-206ENST00000549727 NUBP1P53384 320 aa14.32□□□□□ -0.12
ATP2B1-206ENST00000549727 MS4A3Q96HJ5 214 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms