RNA–Protein interactions for RNA: ENST00000549039.5

CTDSP2-205, Transcript of CTD small phosphatase 2, humanhuman

TSL 2

Gene CTDSP2, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-205ENST00000549039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
CTDSP2-205ENST00000549039 TMC1Q8TDI8 760 aa17.26■□□□□ 0.35
CTDSP2-205ENST00000549039 CPSF1Q10570 1443 aaKnown RBP17.26■□□□□ 0.35
CTDSP2-205ENST00000549039 PIK3C2AO00443 1686 aa17.25■□□□□ 0.35
CTDSP2-205ENST00000549039 CDCA7Q9BWT1 371 aaPredicted RBP17.24■□□□□ 0.35
CTDSP2-205ENST00000549039 PARP4Q9UKK3 1724 aaKnown RBP17.22■□□□□ 0.35
CTDSP2-205ENST00000549039 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
CTDSP2-205ENST00000549039 TONSLQ96HA7 1378 aa17.21■□□□□ 0.35
CTDSP2-205ENST00000549039 EXOC5O00471 708 aa17.21■□□□□ 0.35
CTDSP2-205ENST00000549039 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-205ENST00000549039 MARCH10Q8NA82 808 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-205ENST00000549039 BCL11BQ9C0K0 894 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-205ENST00000549039 PPP1R1BQ9UD71 204 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-205ENST00000549039 PTF1AQ7RTS3 328 aa17.2■□□□□ 0.34
CTDSP2-205ENST00000549039 PLSCR1O15162 318 aa17.19■□□□□ 0.34
CTDSP2-205ENST00000549039 NME9Q86XW9 330 aa17.19■□□□□ 0.34
CTDSP2-205ENST00000549039 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
CTDSP2-205ENST00000549039 SLC12A5Q9H2X9 1139 aa17.18■□□□□ 0.34
CTDSP2-205ENST00000549039 SPON1Q9HCB6 807 aa17.18■□□□□ 0.34
CTDSP2-205ENST00000549039 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
CTDSP2-205ENST00000549039 RREB1Q92766 1687 aa17.17■□□□□ 0.34
CTDSP2-205ENST00000549039 CCDC7Q96M83 1385 aa17.16■□□□□ 0.34
CTDSP2-205ENST00000549039 SBNO2Q9Y2G9 1366 aa17.16■□□□□ 0.34
CTDSP2-205ENST00000549039 NUP188Q5SRE5 1749 aa17.16■□□□□ 0.34
CTDSP2-205ENST00000549039 COL18A1P39060 1754 aa17.16■□□□□ 0.34
CTDSP2-205ENST00000549039 KCNQ2O43526 872 aa17.16■□□□□ 0.34
CTDSP2-205ENST00000549039 TERF2IPQ9NYB0 399 aa17.16■□□□□ 0.34
CTDSP2-205ENST00000549039 NFAT5O94916 1531 aa17.15■□□□□ 0.34
CTDSP2-205ENST00000549039 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
CTDSP2-205ENST00000549039 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
CTDSP2-205ENST00000549039 PEAK1Q9H792 1746 aa17.14■□□□□ 0.33
CTDSP2-205ENST00000549039 ANO8Q9HCE9 1232 aaPredicted RBP17.14■□□□□ 0.33
CTDSP2-205ENST00000549039 ANKRD24Q8TF21 1146 aa17.13■□□□□ 0.33
CTDSP2-205ENST00000549039 ACSBG1Q96GR2 724 aa17.13■□□□□ 0.33
CTDSP2-205ENST00000549039 ERBB3P21860 1342 aa17.13■□□□□ 0.33
CTDSP2-205ENST00000549039 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
CTDSP2-205ENST00000549039 TXNRD1Q16881 649 aa17.12■□□□□ 0.33
CTDSP2-205ENST00000549039 PROM2Q8N271 834 aa17.12■□□□□ 0.33
CTDSP2-205ENST00000549039 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
CTDSP2-205ENST00000549039 IL2RBP14784 551 aa17.11■□□□□ 0.33
CTDSP2-205ENST00000549039 STK32BQ9NY57 414 aa17.11■□□□□ 0.33
CTDSP2-205ENST00000549039 A0A1W2PP64 1363 aa17.11■□□□□ 0.33
CTDSP2-205ENST00000549039 BCL9O00512 1426 aa17.11■□□□□ 0.33
CTDSP2-205ENST00000549039 EDC4Q6P2E9 1401 aaKnown RBP17.11■□□□□ 0.33
CTDSP2-205ENST00000549039 ZBTB7AO95365 584 aa17.1■□□□□ 0.33
CTDSP2-205ENST00000549039 LTV1Q96GA3 475 aaPredicted RBP17.1■□□□□ 0.33
CTDSP2-205ENST00000549039 PDGFDQ9GZP0 370 aaPredicted RBP17.1■□□□□ 0.33
CTDSP2-205ENST00000549039 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
CTDSP2-205ENST00000549039 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
CTDSP2-205ENST00000549039 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
CTDSP2-205ENST00000549039 ABCC6O95255 1503 aa17.09■□□□□ 0.33
CTDSP2-205ENST00000549039 RGPD5Q99666 1765 aa17.08■□□□□ 0.33
CTDSP2-205ENST00000549039 WNK3Q9BYP7 1800 aa17.07■□□□□ 0.32
CTDSP2-205ENST00000549039 SLC15A2Q16348 729 aa17.07■□□□□ 0.32
CTDSP2-205ENST00000549039 COG3Q96JB2 828 aa17.07■□□□□ 0.32
CTDSP2-205ENST00000549039 PUS7Q96PZ0 661 aaKnown RBP17.07■□□□□ 0.32
CTDSP2-205ENST00000549039 ATF5Q9Y2D1 282 aaPredicted RBP17.07■□□□□ 0.32
CTDSP2-205ENST00000549039 YY1P25490 414 aa17.06■□□□□ 0.32
CTDSP2-205ENST00000549039 DDX54Q8TDD1 881 aaKnown RBP17.06■□□□□ 0.32
CTDSP2-205ENST00000549039 RGPD3A6NKT7 1758 aaPredicted RBP17.05■□□□□ 0.32
CTDSP2-205ENST00000549039 RGPD4Q7Z3J3 1758 aa17.05■□□□□ 0.32
CTDSP2-205ENST00000549039 IP6K1Q92551 441 aa17.05■□□□□ 0.32
CTDSP2-205ENST00000549039 TESK2Q96S53 571 aa17.05■□□□□ 0.32
CTDSP2-205ENST00000549039 SBF2Q86WG5 1849 aa17.05■□□□□ 0.32
CTDSP2-205ENST00000549039 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
CTDSP2-205ENST00000549039 SLC24A1O60721 1099 aa17.04■□□□□ 0.32
CTDSP2-205ENST00000549039 AMPHP49418 695 aa17.04■□□□□ 0.32
CTDSP2-205ENST00000549039 FBLN1P23142 703 aa17.02■□□□□ 0.32
CTDSP2-205ENST00000549039 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.32
CTDSP2-205ENST00000549039 TMF1P82094 1093 aa17.01■□□□□ 0.31
CTDSP2-205ENST00000549039 MAP3K19Q56UN5 1328 aa17■□□□□ 0.31
CTDSP2-205ENST00000549039 LTN1O94822 1766 aa17■□□□□ 0.31
CTDSP2-205ENST00000549039 HOXC9P31274 260 aa17■□□□□ 0.31
CTDSP2-205ENST00000549039 PTGER2P43116 358 aa17■□□□□ 0.31
CTDSP2-205ENST00000549039 MTFR1LQ9H019 292 aa17■□□□□ 0.31
CTDSP2-205ENST00000549039 USP54Q70EL1 1684 aa17■□□□□ 0.31
CTDSP2-205ENST00000549039 UTRNP46939 3433 aa16.99■□□□□ 0.31
CTDSP2-205ENST00000549039 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
CTDSP2-205ENST00000549039 RRS1Q15050 365 aaKnown RBP16.98■□□□□ 0.31
CTDSP2-205ENST00000549039 GGNBP2Q9H3C7 697 aa16.98■□□□□ 0.31
CTDSP2-205ENST00000549039 ANKRD36BQ8N2N9 1353 aa16.98■□□□□ 0.31
CTDSP2-205ENST00000549039 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
CTDSP2-205ENST00000549039 CASZ1Q86V15 1759 aa16.97■□□□□ 0.31
CTDSP2-205ENST00000549039 FHDC1Q9C0D6 1143 aaPredicted RBP16.97■□□□□ 0.31
CTDSP2-205ENST00000549039 ZNF827Q17R98 1081 aa16.96■□□□□ 0.31
CTDSP2-205ENST00000549039 LRRC4BQ9NT99 713 aa16.96■□□□□ 0.31
CTDSP2-205ENST00000549039 USP47Q96K76 1375 aa16.96■□□□□ 0.31
CTDSP2-205ENST00000549039 PRIM1P49642 420 aaKnown RBP16.95■□□□□ 0.3
CTDSP2-205ENST00000549039 ZCRB1Q8TBF4 217 aaKnown RBP16.95■□□□□ 0.3
CTDSP2-205ENST00000549039 SYT17Q9BSW7 474 aa16.95■□□□□ 0.3
CTDSP2-205ENST00000549039 FYB1O15117 783 aa16.94■□□□□ 0.3
CTDSP2-205ENST00000549039 USHBP1Q8N6Y0 703 aa16.94■□□□□ 0.3
CTDSP2-205ENST00000549039 ARXQ96QS3 562 aa16.94■□□□□ 0.3
CTDSP2-205ENST00000549039 KCNQ4P56696 695 aa16.93■□□□□ 0.3
CTDSP2-205ENST00000549039 CDCA8Q53HL2 280 aa16.93■□□□□ 0.3
CTDSP2-205ENST00000549039 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
CTDSP2-205ENST00000549039 MYOM1P52179 1685 aa16.92■□□□□ 0.3
CTDSP2-205ENST00000549039 NBPF6Q5VWK0 638 aa16.92■□□□□ 0.3
CTDSP2-205ENST00000549039 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
CTDSP2-205ENST00000549039 RAPGEF4Q8WZA2 1011 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms