RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 MORC1Q86VD1 984 aa13.12□□□□□ -0.31
RAB5B-205ENST00000549034 GJD4Q96KN9 370 aaPredicted RBP13.12□□□□□ -0.31
RAB5B-205ENST00000549034 SLIT2O94813 1529 aa13.12□□□□□ -0.31
RAB5B-205ENST00000549034 COL14A1Q05707 1796 aaKnown RBP13.12□□□□□ -0.31
RAB5B-205ENST00000549034 KIF20BQ96Q89 1820 aa13.11□□□□□ -0.31
RAB5B-205ENST00000549034 DDX10Q13206 875 aaKnown RBP13.11□□□□□ -0.31
RAB5B-205ENST00000549034 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
RAB5B-205ENST00000549034 VPS72Q15906 364 aa13.11□□□□□ -0.31
RAB5B-205ENST00000549034 CC2D1BQ5T0F9 858 aaKnown RBP13.11□□□□□ -0.31
RAB5B-205ENST00000549034 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
RAB5B-205ENST00000549034 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
RAB5B-205ENST00000549034 AATKQ6ZMQ8 1374 aa13.1□□□□□ -0.31
RAB5B-205ENST00000549034 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
RAB5B-205ENST00000549034 CSB-PGBD3P0DP91 1061 aa13.1□□□□□ -0.31
RAB5B-205ENST00000549034 USP35Q9P2H5 1018 aa13.1□□□□□ -0.31
RAB5B-205ENST00000549034 PLCH1Q4KWH8 1693 aa13.09□□□□□ -0.31
RAB5B-205ENST00000549034 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
RAB5B-205ENST00000549034 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
RAB5B-205ENST00000549034 LARP1Q6PKG0 1096 aaKnown RBP13.09□□□□□ -0.31
RAB5B-205ENST00000549034 IP6K1Q92551 441 aa13.09□□□□□ -0.31
RAB5B-205ENST00000549034 LTV1Q96GA3 475 aaPredicted RBP13.09□□□□□ -0.31
RAB5B-205ENST00000549034 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
RAB5B-205ENST00000549034 MAP3K19Q56UN5 1328 aa13.09□□□□□ -0.31
RAB5B-205ENST00000549034 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.31
RAB5B-205ENST00000549034 NWD2Q9ULI1 1742 aa13.08□□□□□ -0.32
RAB5B-205ENST00000549034 ATRNO75882 1429 aa13.08□□□□□ -0.32
RAB5B-205ENST00000549034 TOM1L2Q6ZVM7 507 aa13.08□□□□□ -0.32
RAB5B-205ENST00000549034 MAP2P11137 1827 aaKnown RBP13.08□□□□□ -0.32
RAB5B-205ENST00000549034 USP54Q70EL1 1684 aa13.08□□□□□ -0.32
RAB5B-205ENST00000549034 HOXC9P31274 260 aa13.07□□□□□ -0.32
RAB5B-205ENST00000549034 NFAT5O94916 1531 aa13.07□□□□□ -0.32
RAB5B-205ENST00000549034 SPATA31A5Q5VU36 1347 aa13.07□□□□□ -0.32
RAB5B-205ENST00000549034 SPATA31A7Q8IWB4 1347 aa13.07□□□□□ -0.32
RAB5B-205ENST00000549034 LTN1O94822 1766 aa13.07□□□□□ -0.32
RAB5B-205ENST00000549034 COL18A1P39060 1754 aa13.07□□□□□ -0.32
RAB5B-205ENST00000549034 A0A0G2JS52 829 aa13.06□□□□□ -0.32
RAB5B-205ENST00000549034 ZBTB22O15209 634 aa13.06□□□□□ -0.32
RAB5B-205ENST00000549034 MYT1Q01538 1121 aa13.06□□□□□ -0.32
RAB5B-205ENST00000549034 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
RAB5B-205ENST00000549034 POLKQ9UBT6 870 aa13.06□□□□□ -0.32
RAB5B-205ENST00000549034 EMILIN1Q9Y6C2 1016 aa13.06□□□□□ -0.32
RAB5B-205ENST00000549034 NSD2O96028 1365 aa13.06□□□□□ -0.32
RAB5B-205ENST00000549034 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
RAB5B-205ENST00000549034 HSP90AB2PQ58FF8 381 aa13.05□□□□□ -0.32
RAB5B-205ENST00000549034 NLRP2Q9NX02 1062 aa13.05□□□□□ -0.32
RAB5B-205ENST00000549034 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
RAB5B-205ENST00000549034 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.05□□□□□ -0.32
RAB5B-205ENST00000549034 TCP11L2Q8N4U5 519 aa13.04□□□□□ -0.32
RAB5B-205ENST00000549034 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
RAB5B-205ENST00000549034 WDR17Q8IZU2 1322 aa13.04□□□□□ -0.32
RAB5B-205ENST00000549034 LMO7Q8WWI1 1683 aa13.03□□□□□ -0.32
RAB5B-205ENST00000549034 NRAPQ86VF7 1730 aa13.03□□□□□ -0.32
RAB5B-205ENST00000549034 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
RAB5B-205ENST00000549034 SEPT12Q8IYM1 358 aa13.03□□□□□ -0.32
RAB5B-205ENST00000549034 COL5A2P05997 1499 aaPredicted RBP13.03□□□□□ -0.32
RAB5B-205ENST00000549034 ANKRD26Q9UPS8 1709 aa13.02□□□□□ -0.32
RAB5B-205ENST00000549034 CARD10Q9BWT7 1032 aa13.02□□□□□ -0.33
RAB5B-205ENST00000549034 THRAP3Q9Y2W1 955 aaKnown RBP13.02□□□□□ -0.33
RAB5B-205ENST00000549034 MTHFSP49914 203 aa13.01□□□□□ -0.33
RAB5B-205ENST00000549034 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
RAB5B-205ENST00000549034 ERBB3P21860 1342 aa13.01□□□□□ -0.33
RAB5B-205ENST00000549034 CRB1P82279 1406 aa13.01□□□□□ -0.33
RAB5B-205ENST00000549034 GLI3P10071 1580 aa13□□□□□ -0.33
RAB5B-205ENST00000549034 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
RAB5B-205ENST00000549034 FLT4P35916 1363 aa13□□□□□ -0.33
RAB5B-205ENST00000549034 NPC1L1Q9UHC9 1359 aa13□□□□□ -0.33
RAB5B-205ENST00000549034 BARGINQ6ZT62 677 aa13□□□□□ -0.33
RAB5B-205ENST00000549034 RTL1A6NKG5 1358 aa12.99□□□□□ -0.33
RAB5B-205ENST00000549034 INSRP06213 1382 aa12.99□□□□□ -0.33
RAB5B-205ENST00000549034 KIF24Q5T7B8 1368 aa12.99□□□□□ -0.33
RAB5B-205ENST00000549034 PDE3BQ13370 1112 aa12.98□□□□□ -0.33
RAB5B-205ENST00000549034 NBPF6Q5VWK0 638 aa12.98□□□□□ -0.33
RAB5B-205ENST00000549034 NBPF4Q96M43 638 aa12.98□□□□□ -0.33
RAB5B-205ENST00000549034 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
RAB5B-205ENST00000549034 RGS12O14924 1447 aa12.97□□□□□ -0.33
RAB5B-205ENST00000549034 PEAK1Q9H792 1746 aa12.97□□□□□ -0.33
RAB5B-205ENST00000549034 EXOC5O00471 708 aa12.97□□□□□ -0.33
RAB5B-205ENST00000549034 KRT27Q7Z3Y8 459 aa12.97□□□□□ -0.33
RAB5B-205ENST00000549034 USHBP1Q8N6Y0 703 aa12.97□□□□□ -0.33
RAB5B-205ENST00000549034 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
RAB5B-205ENST00000549034 ABCC6O95255 1503 aa12.97□□□□□ -0.33
RAB5B-205ENST00000549034 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
RAB5B-205ENST00000549034 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.33
RAB5B-205ENST00000549034 IL2RBP14784 551 aa12.96□□□□□ -0.33
RAB5B-205ENST00000549034 PPP2R1AP30153 589 aa12.96□□□□□ -0.33
RAB5B-205ENST00000549034 EIF4A2Q14240 407 aaKnown RBP12.96□□□□□ -0.33
RAB5B-205ENST00000549034 EYA1Q99502 592 aa12.96□□□□□ -0.33
RAB5B-205ENST00000549034 CDCA7Q9BWT1 371 aaPredicted RBP12.96□□□□□ -0.33
RAB5B-205ENST00000549034 BRWD3Q6RI45 1802 aa12.95□□□□□ -0.34
RAB5B-205ENST00000549034 DDB1Q16531 1140 aa12.95□□□□□ -0.34
RAB5B-205ENST00000549034 FAM182BQ5T319 152 aa12.95□□□□□ -0.34
RAB5B-205ENST00000549034 RALBP1Q15311 655 aa12.94□□□□□ -0.34
RAB5B-205ENST00000549034 SOCS7O14512 581 aa12.93□□□□□ -0.34
RAB5B-205ENST00000549034 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
RAB5B-205ENST00000549034 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-205ENST00000549034 RAPGEF4Q8WZA2 1011 aa12.93□□□□□ -0.34
RAB5B-205ENST00000549034 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
RAB5B-205ENST00000549034 IL13P35225 146 aa12.92□□□□□ -0.34
RAB5B-205ENST00000549034 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
RAB5B-205ENST00000549034 DDX54Q8TDD1 881 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms