RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 NWD2Q9ULI1 1742 aa28.6■■■□□ 2.17
CACNB3-210ENST00000548874 IP6K1Q92551 441 aa28.59■■■□□ 2.17
CACNB3-210ENST00000548874 NGLY1Q96IV0 654 aa28.59■■■□□ 2.17
CACNB3-210ENST00000548874 AMPHP49418 695 aa28.58■■■□□ 2.17
CACNB3-210ENST00000548874 AXIN2Q9Y2T1 843 aa28.58■■■□□ 2.17
CACNB3-210ENST00000548874 FLT4P35916 1363 aa28.58■■■□□ 2.17
CACNB3-210ENST00000548874 PPP2R1AP30153 589 aa28.57■■■□□ 2.16
CACNB3-210ENST00000548874 HOXC9P31274 260 aa28.57■■■□□ 2.16
CACNB3-210ENST00000548874 BLMP54132 1417 aaPredicted RBP28.57■■■□□ 2.16
CACNB3-210ENST00000548874 BCL9LQ86UU0 1499 aa28.56■■■□□ 2.16
CACNB3-210ENST00000548874 NRAPQ86VF7 1730 aa28.56■■■□□ 2.16
CACNB3-210ENST00000548874 BTG4Q9NY30 223 aa28.56■■■□□ 2.16
CACNB3-210ENST00000548874 CDK12Q9NYV4 1490 aaPredicted RBP28.56■■■□□ 2.16
CACNB3-210ENST00000548874 AFF2P51816 1311 aa28.55■■■□□ 2.16
CACNB3-210ENST00000548874 COL5A2P05997 1499 aaPredicted RBP28.54■■■□□ 2.16
CACNB3-210ENST00000548874 MTHFSP49914 203 aa28.54■■■□□ 2.16
CACNB3-210ENST00000548874 RGPD5Q99666 1765 aa28.54■■■□□ 2.16
CACNB3-210ENST00000548874 INSRP06213 1382 aa28.53■■■□□ 2.16
CACNB3-210ENST00000548874 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.53■■■□□ 2.16
CACNB3-210ENST00000548874 PPM1GO15355 546 aaPredicted RBP28.52■■■□□ 2.16
CACNB3-210ENST00000548874 MYBBP1AQ9BQG0 1328 aaKnown RBP28.51■■■□□ 2.15
CACNB3-210ENST00000548874 ANP32CO43423 234 aa28.51■■■□□ 2.15
CACNB3-210ENST00000548874 HSP90AB2PQ58FF8 381 aa28.51■■■□□ 2.15
CACNB3-210ENST00000548874 UNC5CLQ8IV45 518 aa28.51■■■□□ 2.15
CACNB3-210ENST00000548874 USP21Q9UK80 565 aa28.5■■■□□ 2.15
CACNB3-210ENST00000548874 ERBB3P21860 1342 aa28.49■■■□□ 2.15
CACNB3-210ENST00000548874 DIEXFQ68CQ4 756 aaKnown RBP28.48■■■□□ 2.15
CACNB3-210ENST00000548874 COL3A1P02461 1466 aaPredicted RBP28.46■■■□□ 2.15
CACNB3-210ENST00000548874 ANKRD24Q8TF21 1146 aa28.46■■■□□ 2.15
CACNB3-210ENST00000548874 WDR17Q8IZU2 1322 aa28.45■■■□□ 2.15
CACNB3-210ENST00000548874 ATRNO75882 1429 aa28.44■■■□□ 2.14
CACNB3-210ENST00000548874 EVA1CP58658 441 aa28.44■■■□□ 2.14
CACNB3-210ENST00000548874 ZNF772Q68DY9 489 aaPredicted RBP28.44■■■□□ 2.14
CACNB3-210ENST00000548874 STRN4Q9NRL3 753 aa28.44■■■□□ 2.14
CACNB3-210ENST00000548874 RGS17Q9UGC6 210 aaPredicted RBP28.44■■■□□ 2.14
CACNB3-210ENST00000548874 FAM208AQ9UK61 1670 aaKnown RBP28.42■■■□□ 2.14
CACNB3-210ENST00000548874 VPS72Q15906 364 aa28.42■■■□□ 2.14
CACNB3-210ENST00000548874 LARP1Q6PKG0 1096 aaKnown RBP28.42■■■□□ 2.14
CACNB3-210ENST00000548874 EIF4A2Q14240 407 aaKnown RBP28.41■■■□□ 2.14
CACNB3-210ENST00000548874 LTV1Q96GA3 475 aaPredicted RBP28.41■■■□□ 2.14
CACNB3-210ENST00000548874 PHF23Q9BUL5 403 aaPredicted RBP28.41■■■□□ 2.14
CACNB3-210ENST00000548874 CRB1P82279 1406 aa28.41■■■□□ 2.14
CACNB3-210ENST00000548874 TRPC5Q9UL62 973 aaPredicted RBP28.4■■■□□ 2.14
CACNB3-210ENST00000548874 CSB-PGBD3P0DP91 1061 aa28.39■■■□□ 2.14
CACNB3-210ENST00000548874 CFAP53Q96M91 514 aa28.39■■■□□ 2.14
CACNB3-210ENST00000548874 IL13P35225 146 aa28.38■■■□□ 2.13
CACNB3-210ENST00000548874 SPATA31A5Q5VU36 1347 aa28.38■■■□□ 2.13
CACNB3-210ENST00000548874 SPATA31A7Q8IWB4 1347 aa28.38■■■□□ 2.13
CACNB3-210ENST00000548874 TOM1L2Q6ZVM7 507 aa28.36■■■□□ 2.13
CACNB3-210ENST00000548874 CARD10Q9BWT7 1032 aa28.36■■■□□ 2.13
CACNB3-210ENST00000548874 QTRT2Q9H974 415 aaKnown RBP28.36■■■□□ 2.13
CACNB3-210ENST00000548874 SPATA31A1Q5TZJ5 1347 aa28.36■■■□□ 2.13
CACNB3-210ENST00000548874 NCAPD2Q15021 1401 aa28.35■■■□□ 2.13
CACNB3-210ENST00000548874 RGPD2P0DJD1 1756 aa28.35■■■□□ 2.13
CACNB3-210ENST00000548874 DIAPH1O60610 1272 aaKnown RBP28.35■■■□□ 2.13
CACNB3-210ENST00000548874 RGPD1P0DJD0 1748 aa28.35■■■□□ 2.13
CACNB3-210ENST00000548874 GLI3P10071 1580 aa28.34■■■□□ 2.13
CACNB3-210ENST00000548874 NBPF6Q5VWK0 638 aa28.34■■■□□ 2.13
CACNB3-210ENST00000548874 NBPF4Q96M43 638 aa28.34■■■□□ 2.13
CACNB3-210ENST00000548874 NLRP2Q9NX02 1062 aa28.34■■■□□ 2.13
CACNB3-210ENST00000548874 GJD4Q96KN9 370 aaPredicted RBP28.33■■■□□ 2.13
CACNB3-210ENST00000548874 EYA1Q99502 592 aa28.33■■■□□ 2.13
CACNB3-210ENST00000548874 IGSF1Q8N6C5 1336 aa28.32■■■□□ 2.12
CACNB3-210ENST00000548874 POTEAQ6S8J7 498 aa28.31■■■□□ 2.12
CACNB3-210ENST00000548874 CCDC9Q9Y3X0 531 aaKnown RBP28.31■■■□□ 2.12
CACNB3-210ENST00000548874 TCP11L2Q8N4U5 519 aa28.29■■■□□ 2.12
CACNB3-210ENST00000548874 THRAP3Q9Y2W1 955 aaKnown RBP28.29■■■□□ 2.12
CACNB3-210ENST00000548874 CCDC184Q52MB2 194 aa28.28■■■□□ 2.12
CACNB3-210ENST00000548874 USP35Q9P2H5 1018 aa28.28■■■□□ 2.12
CACNB3-210ENST00000548874 RBM6P78332 1123 aaKnown RBP28.27■■■□□ 2.12
CACNB3-210ENST00000548874 BARGINQ6ZT62 677 aa28.27■■■□□ 2.12
CACNB3-210ENST00000548874 USHBP1Q8N6Y0 703 aa28.26■■■□□ 2.11
CACNB3-210ENST00000548874 NUDCQ9Y266 331 aa28.26■■■□□ 2.11
CACNB3-210ENST00000548874 DISP2A7MBM2 1401 aa28.26■■■□□ 2.11
CACNB3-210ENST00000548874 KDRP35968 1356 aa28.25■■■□□ 2.11
CACNB3-210ENST00000548874 WNK3Q9BYP7 1800 aa28.25■■■□□ 2.11
CACNB3-210ENST00000548874 ONECUT3O60422 494 aaPredicted RBP28.23■■■□□ 2.11
CACNB3-210ENST00000548874 MIER1Q8N108 512 aa28.23■■■□□ 2.11
CACNB3-210ENST00000548874 THSD7AQ9UPZ6 1657 aa28.23■■■□□ 2.11
CACNB3-210ENST00000548874 U2SURPO15042 1029 aaKnown RBP28.22■■■□□ 2.11
CACNB3-210ENST00000548874 RXRBP28702 533 aa28.22■■■□□ 2.11
CACNB3-210ENST00000548874 FAM98CQ17RN3 349 aaKnown RBP28.21■■■□□ 2.11
CACNB3-210ENST00000548874 AEBP1Q8IUX7 1158 aa28.21■■■□□ 2.11
CACNB3-210ENST00000548874 MRS2Q9HD23 443 aa28.21■■■□□ 2.11
CACNB3-210ENST00000548874 MEGF6O75095 1541 aa28.2■■■□□ 2.1
CACNB3-210ENST00000548874 CCER2I3L3R5 266 aa28.2■■■□□ 2.1
CACNB3-210ENST00000548874 SULT6B1Q6IMI4 303 aa28.2■■■□□ 2.1
CACNB3-210ENST00000548874 IL2RBP14784 551 aa28.19■■■□□ 2.1
CACNB3-210ENST00000548874 CDCA7Q9BWT1 371 aaPredicted RBP28.19■■■□□ 2.1
CACNB3-210ENST00000548874 U2AF1L5P0DN76 240 aaPredicted RBP28.18■■■□□ 2.1
CACNB3-210ENST00000548874 U2AF1Q01081 240 aaKnown RBP eCLIP28.18■■■□□ 2.1
CACNB3-210ENST00000548874 PLEKHG2Q9H7P9 1386 aa28.17■■■□□ 2.1
CACNB3-210ENST00000548874 HMOX1P09601 288 aa28.17■■■□□ 2.1
CACNB3-210ENST00000548874 PARP4Q9UKK3 1724 aaKnown RBP28.17■■■□□ 2.1
CACNB3-210ENST00000548874 OVOS2A0A0G2JMS6 1433 aa28.17■■■□□ 2.1
CACNB3-210ENST00000548874 RAPGEF4Q8WZA2 1011 aa28.16■■■□□ 2.1
CACNB3-210ENST00000548874 PNISRQ8TF01 805 aaKnown RBP28.14■■■□□ 2.1
CACNB3-210ENST00000548874 RSPH6AQ9H0K4 717 aa28.14■■■□□ 2.1
CACNB3-210ENST00000548874 RGS12O14924 1447 aa28.14■■■□□ 2.1
CACNB3-210ENST00000548874 LRRC37A3O60309 1634 aa28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms