RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.98■□□□□ 0.15
BEST3-209ENST00000548658 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
BEST3-209ENST00000548658 CRB1P82279 1406 aa15.97■□□□□ 0.15
BEST3-209ENST00000548658 C11orf95C9JLR9 678 aaPredicted RBP15.97■□□□□ 0.15
BEST3-209ENST00000548658 BAG6P46379 1132 aa15.97■□□□□ 0.15
BEST3-209ENST00000548658 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
BEST3-209ENST00000548658 THSD7AQ9UPZ6 1657 aa15.97■□□□□ 0.15
BEST3-209ENST00000548658 USP31Q70CQ4 1352 aa15.97■□□□□ 0.15
BEST3-209ENST00000548658 EDC4Q6P2E9 1401 aaKnown RBP15.96■□□□□ 0.15
BEST3-209ENST00000548658 HOXD11P31277 338 aaPredicted RBP15.96■□□□□ 0.15
BEST3-209ENST00000548658 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.15
BEST3-209ENST00000548658 MON2Q7Z3U7 1717 aa15.95■□□□□ 0.14
BEST3-209ENST00000548658 SOX12O15370 315 aa15.95■□□□□ 0.14
BEST3-209ENST00000548658 CDCA7Q9BWT1 371 aaPredicted RBP15.95■□□□□ 0.14
BEST3-209ENST00000548658 USP47Q96K76 1375 aa15.95■□□□□ 0.14
BEST3-209ENST00000548658 CD163L1Q9NR16 1453 aa15.95■□□□□ 0.14
BEST3-209ENST00000548658 DEFB132Q7Z7B7 95 aa15.94■□□□□ 0.14
BEST3-209ENST00000548658 AXIN2Q9Y2T1 843 aa15.94■□□□□ 0.14
BEST3-209ENST00000548658 A0A1W2PP64 1363 aa15.94■□□□□ 0.14
BEST3-209ENST00000548658 WDR17Q8IZU2 1322 aa15.94■□□□□ 0.14
BEST3-209ENST00000548658 CSB-PGBD3P0DP91 1061 aa15.93■□□□□ 0.14
BEST3-209ENST00000548658 FAM182BQ5T319 152 aa15.93■□□□□ 0.14
BEST3-209ENST00000548658 NME9Q86XW9 330 aa15.93■□□□□ 0.14
BEST3-209ENST00000548658 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
BEST3-209ENST00000548658 CARD10Q9BWT7 1032 aa15.91■□□□□ 0.14
BEST3-209ENST00000548658 COL18A1P39060 1754 aa15.9■□□□□ 0.14
BEST3-209ENST00000548658 ABCC6O95255 1503 aa15.9■□□□□ 0.14
BEST3-209ENST00000548658 DDB1Q16531 1140 aa15.9■□□□□ 0.14
BEST3-209ENST00000548658 NFAT5O94916 1531 aa15.89■□□□□ 0.13
BEST3-209ENST00000548658 ANKRD36BQ8N2N9 1353 aa15.89■□□□□ 0.13
BEST3-209ENST00000548658 TRIM37O94972 964 aa15.89■□□□□ 0.13
BEST3-209ENST00000548658 COG3Q96JB2 828 aa15.89■□□□□ 0.13
BEST3-209ENST00000548658 RGPD1P0DJD0 1748 aa15.88■□□□□ 0.13
BEST3-209ENST00000548658 USP54Q70EL1 1684 aa15.88■□□□□ 0.13
BEST3-209ENST00000548658 CCDC7Q96M83 1385 aa15.87■□□□□ 0.13
BEST3-209ENST00000548658 DISP2A7MBM2 1401 aa15.87■□□□□ 0.13
BEST3-209ENST00000548658 EN1Q05925 392 aaPredicted RBP15.87■□□□□ 0.13
BEST3-209ENST00000548658 PARP4Q9UKK3 1724 aaKnown RBP15.86■□□□□ 0.13
BEST3-209ENST00000548658 APBA3O96018 575 aa15.86■□□□□ 0.13
BEST3-209ENST00000548658 PARD3Q8TEW0 1356 aa15.86■□□□□ 0.13
BEST3-209ENST00000548658 OVOS2A0A0J9YW53 1432 aa15.85■□□□□ 0.13
BEST3-209ENST00000548658 OVOS2Q6IE36 1432 aa15.85■□□□□ 0.13
BEST3-209ENST00000548658 EXOC5O00471 708 aa15.85■□□□□ 0.13
BEST3-209ENST00000548658 ERBB3P21860 1342 aa15.85■□□□□ 0.13
BEST3-209ENST00000548658 IP6K1Q92551 441 aa15.84■□□□□ 0.13
BEST3-209ENST00000548658 NLRP2Q9NX02 1062 aa15.84■□□□□ 0.13
BEST3-209ENST00000548658 OVOS2A0A0G2JMS6 1433 aa15.84■□□□□ 0.13
BEST3-209ENST00000548658 RGPD5Q99666 1765 aa15.83■□□□□ 0.12
BEST3-209ENST00000548658 CAMKK2Q96RR4 588 aa15.83■□□□□ 0.12
BEST3-209ENST00000548658 FYB1O15117 783 aa15.82■□□□□ 0.12
BEST3-209ENST00000548658 ANKRD24Q8TF21 1146 aa15.82■□□□□ 0.12
BEST3-209ENST00000548658 LTN1O94822 1766 aa15.81■□□□□ 0.12
BEST3-209ENST00000548658 EIF4G2P78344 907 aaKnown RBP eCLIP15.81■□□□□ 0.12
BEST3-209ENST00000548658 EZH2Q15910 746 aaKnown RBP15.81■□□□□ 0.12
BEST3-209ENST00000548658 BCL9O00512 1426 aa15.8■□□□□ 0.12
BEST3-209ENST00000548658 IL2RBP14784 551 aa15.8■□□□□ 0.12
BEST3-209ENST00000548658 AMPHP49418 695 aa15.8■□□□□ 0.12
BEST3-209ENST00000548658 TNS1Q9HBL0 1735 aaKnown RBP15.8■□□□□ 0.12
BEST3-209ENST00000548658 MARCH10Q8NA82 808 aaPredicted RBP15.79■□□□□ 0.12
BEST3-209ENST00000548658 BCL11BQ9C0K0 894 aaPredicted RBP15.79■□□□□ 0.12
BEST3-209ENST00000548658 LRRC37A3O60309 1634 aa15.79■□□□□ 0.12
BEST3-209ENST00000548658 MAP3K19Q56UN5 1328 aa15.78■□□□□ 0.12
BEST3-209ENST00000548658 PLSCR1O15162 318 aa15.78■□□□□ 0.12
BEST3-209ENST00000548658 NBPF14Q5TI25 921 aa15.78■□□□□ 0.12
BEST3-209ENST00000548658 GGNBP2Q9H3C7 697 aa15.78■□□□□ 0.12
BEST3-209ENST00000548658 HOXC9P31274 260 aa15.77■□□□□ 0.12
BEST3-209ENST00000548658 WNK3Q9BYP7 1800 aa15.76■□□□□ 0.11
BEST3-209ENST00000548658 RTL1A6NKG5 1358 aa15.75■□□□□ 0.11
BEST3-209ENST00000548658 PEAK1Q9H792 1746 aa15.75■□□□□ 0.11
BEST3-209ENST00000548658 PSDA5PKW4 1024 aaPredicted RBP15.75■□□□□ 0.11
BEST3-209ENST00000548658 LTV1Q96GA3 475 aaPredicted RBP15.75■□□□□ 0.11
BEST3-209ENST00000548658 CARD14Q9BXL6 1004 aa15.75■□□□□ 0.11
BEST3-209ENST00000548658 TNS2Q63HR2 1409 aa15.75■□□□□ 0.11
BEST3-209ENST00000548658 SRCAPQ6ZRS2 3230 aa15.75■□□□□ 0.11
BEST3-209ENST00000548658 KIF24Q5T7B8 1368 aa15.75■□□□□ 0.11
BEST3-209ENST00000548658 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
BEST3-209ENST00000548658 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
BEST3-209ENST00000548658 R3HDM1Q15032 1099 aaKnown RBP15.74■□□□□ 0.11
BEST3-209ENST00000548658 HSPA5P11021 654 aaKnown RBP15.73■□□□□ 0.11
BEST3-209ENST00000548658 FBLN1P23142 703 aa15.73■□□□□ 0.11
BEST3-209ENST00000548658 RRS1Q15050 365 aaKnown RBP15.73■□□□□ 0.11
BEST3-209ENST00000548658 POLR3GLQ9BT43 218 aa15.73■□□□□ 0.11
BEST3-209ENST00000548658 FAM208AQ9UK61 1670 aaKnown RBP15.73■□□□□ 0.11
BEST3-209ENST00000548658 SMG6Q86US8 1419 aaKnown RBP15.72■□□□□ 0.11
BEST3-209ENST00000548658 NSD3Q9BZ95 1437 aa15.72■□□□□ 0.11
BEST3-209ENST00000548658 SBF2Q86WG5 1849 aa15.72■□□□□ 0.11
BEST3-209ENST00000548658 INSRP06213 1382 aa15.7■□□□□ 0.1
BEST3-209ENST00000548658 FLT4P35916 1363 aa15.7■□□□□ 0.1
BEST3-209ENST00000548658 KIF20BQ96Q89 1820 aa15.69■□□□□ 0.1
BEST3-209ENST00000548658 MYOM1P52179 1685 aa15.69■□□□□ 0.1
BEST3-209ENST00000548658 RGPD3A6NKT7 1758 aaPredicted RBP15.69■□□□□ 0.1
BEST3-209ENST00000548658 RGPD4Q7Z3J3 1758 aa15.69■□□□□ 0.1
BEST3-209ENST00000548658 RREB1Q92766 1687 aa15.68■□□□□ 0.1
BEST3-209ENST00000548658 HSP90AB2PQ58FF8 381 aa15.68■□□□□ 0.1
BEST3-209ENST00000548658 DDX54Q8TDD1 881 aaKnown RBP15.68■□□□□ 0.1
BEST3-209ENST00000548658 NBPF6Q5VWK0 638 aa15.67■□□□□ 0.1
BEST3-209ENST00000548658 PTF1AQ7RTS3 328 aa15.67■□□□□ 0.1
BEST3-209ENST00000548658 ZCRB1Q8TBF4 217 aaKnown RBP15.67■□□□□ 0.1
BEST3-209ENST00000548658 RAPGEF4Q8WZA2 1011 aa15.67■□□□□ 0.1
BEST3-209ENST00000548658 NBPF4Q96M43 638 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms