RNA–Protein interactions for RNA: ENST00000548598.5

RACGAP1-213, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-213ENST00000548598 USP47Q96K76 1375 aa23.89■■□□□ 1.41
RACGAP1-213ENST00000548598 LRRC37A3O60309 1634 aa23.88■■□□□ 1.41
RACGAP1-213ENST00000548598 ZRANB1Q9UGI0 708 aa23.88■■□□□ 1.41
RACGAP1-213ENST00000548598 TIMELESSQ9UNS1 1208 aa23.88■■□□□ 1.41
RACGAP1-213ENST00000548598 OVOS2A0A0J9YW53 1432 aa23.87■■□□□ 1.41
RACGAP1-213ENST00000548598 OVOS2Q6IE36 1432 aa23.87■■□□□ 1.41
RACGAP1-213ENST00000548598 HDGFL2Q7Z4V5 671 aaPredicted RBP23.87■■□□□ 1.41
RACGAP1-213ENST00000548598 TMC1Q8TDI8 760 aa23.87■■□□□ 1.41
RACGAP1-213ENST00000548598 AXIN2Q9Y2T1 843 aa23.87■■□□□ 1.41
RACGAP1-213ENST00000548598 WDR17Q8IZU2 1322 aa23.86■■□□□ 1.41
RACGAP1-213ENST00000548598 LTN1O94822 1766 aa23.86■■□□□ 1.41
RACGAP1-213ENST00000548598 ZBTB7CA1YPR0 619 aa23.85■■□□□ 1.41
RACGAP1-213ENST00000548598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.85■■□□□ 1.41
RACGAP1-213ENST00000548598 TERF2IPQ9NYB0 399 aa23.85■■□□□ 1.41
RACGAP1-213ENST00000548598 PEAK1Q9H792 1746 aa23.84■■□□□ 1.41
RACGAP1-213ENST00000548598 BAG6P46379 1132 aa23.84■■□□□ 1.41
RACGAP1-213ENST00000548598 NME9Q86XW9 330 aa23.84■■□□□ 1.41
RACGAP1-213ENST00000548598 FAM196AQ6ZSG2 479 aa23.83■■□□□ 1.41
RACGAP1-213ENST00000548598 SOX12O15370 315 aa23.81■■□□□ 1.4
RACGAP1-213ENST00000548598 ANKRD36BQ8N2N9 1353 aa23.8■■□□□ 1.4
RACGAP1-213ENST00000548598 PDE3BQ13370 1112 aa23.8■■□□□ 1.4
RACGAP1-213ENST00000548598 TOM1L2Q6ZVM7 507 aa23.8■■□□□ 1.4
RACGAP1-213ENST00000548598 OVOS2A0A0G2JMS6 1433 aa23.77■■□□□ 1.4
RACGAP1-213ENST00000548598 RREB1Q92766 1687 aa23.77■■□□□ 1.4
RACGAP1-213ENST00000548598 TMF1P82094 1093 aa23.77■■□□□ 1.4
RACGAP1-213ENST00000548598 CARD10Q9BWT7 1032 aa23.77■■□□□ 1.4
RACGAP1-213ENST00000548598 PCGF6Q9BYE7 350 aa23.77■■□□□ 1.4
RACGAP1-213ENST00000548598 SBF2Q86WG5 1849 aa23.77■■□□□ 1.4
RACGAP1-213ENST00000548598 MYOM1P52179 1685 aa23.76■■□□□ 1.39
RACGAP1-213ENST00000548598 EN1Q05925 392 aaPredicted RBP23.76■■□□□ 1.39
RACGAP1-213ENST00000548598 ERBB3P21860 1342 aa23.76■■□□□ 1.39
RACGAP1-213ENST00000548598 TRIM37O94972 964 aa23.75■■□□□ 1.39
RACGAP1-213ENST00000548598 CDCA7Q9BWT1 371 aaPredicted RBP23.75■■□□□ 1.39
RACGAP1-213ENST00000548598 PARD3Q8TEW0 1356 aa23.75■■□□□ 1.39
RACGAP1-213ENST00000548598 CCDC7Q96M83 1385 aa23.75■■□□□ 1.39
RACGAP1-213ENST00000548598 C11orf95C9JLR9 678 aaPredicted RBP23.74■■□□□ 1.39
RACGAP1-213ENST00000548598 RGPD3A6NKT7 1758 aaPredicted RBP23.73■■□□□ 1.39
RACGAP1-213ENST00000548598 RGPD4Q7Z3J3 1758 aa23.73■■□□□ 1.39
RACGAP1-213ENST00000548598 BCL9O00512 1426 aa23.73■■□□□ 1.39
RACGAP1-213ENST00000548598 DDB1Q16531 1140 aa23.72■■□□□ 1.39
RACGAP1-213ENST00000548598 CAMKK2Q96RR4 588 aa23.72■■□□□ 1.39
RACGAP1-213ENST00000548598 FAM208AQ9UK61 1670 aaKnown RBP23.72■■□□□ 1.39
RACGAP1-213ENST00000548598 NUP188Q5SRE5 1749 aa23.71■■□□□ 1.39
RACGAP1-213ENST00000548598 LRP5O75197 1615 aa23.71■■□□□ 1.39
RACGAP1-213ENST00000548598 CSB-PGBD3P0DP91 1061 aa23.71■■□□□ 1.39
RACGAP1-213ENST00000548598 TNS2Q63HR2 1409 aa23.7■■□□□ 1.38
RACGAP1-213ENST00000548598 EZH2Q15910 746 aaKnown RBP23.7■■□□□ 1.38
RACGAP1-213ENST00000548598 KIF20BQ96Q89 1820 aa23.69■■□□□ 1.38
RACGAP1-213ENST00000548598 CDCA8Q53HL2 280 aa23.69■■□□□ 1.38
RACGAP1-213ENST00000548598 APBA3O96018 575 aa23.68■■□□□ 1.38
RACGAP1-213ENST00000548598 COG3Q96JB2 828 aa23.67■■□□□ 1.38
RACGAP1-213ENST00000548598 MARCH10Q8NA82 808 aaPredicted RBP23.65■■□□□ 1.38
RACGAP1-213ENST00000548598 ANKRD24Q8TF21 1146 aa23.65■■□□□ 1.38
RACGAP1-213ENST00000548598 IP6K1Q92551 441 aa23.65■■□□□ 1.38
RACGAP1-213ENST00000548598 RTL1A6NKG5 1358 aa23.63■■□□□ 1.37
RACGAP1-213ENST00000548598 MAP3K19Q56UN5 1328 aa23.62■■□□□ 1.37
RACGAP1-213ENST00000548598 FYB1O15117 783 aa23.62■■□□□ 1.37
RACGAP1-213ENST00000548598 PSDA5PKW4 1024 aaPredicted RBP23.61■■□□□ 1.37
RACGAP1-213ENST00000548598 NLRP2Q9NX02 1062 aa23.61■■□□□ 1.37
RACGAP1-213ENST00000548598 NHSQ6T4R5 1651 aa23.6■■□□□ 1.37
RACGAP1-213ENST00000548598 EXOC5O00471 708 aa23.59■■□□□ 1.37
RACGAP1-213ENST00000548598 HOXC9P31274 260 aa23.59■■□□□ 1.37
RACGAP1-213ENST00000548598 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
RACGAP1-213ENST00000548598 BCL11BQ9C0K0 894 aaPredicted RBP23.59■■□□□ 1.37
RACGAP1-213ENST00000548598 PLSCR1O15162 318 aa23.58■■□□□ 1.37
RACGAP1-213ENST00000548598 IL2RBP14784 551 aa23.58■■□□□ 1.37
RACGAP1-213ENST00000548598 GGNBP2Q9H3C7 697 aa23.58■■□□□ 1.37
RACGAP1-213ENST00000548598 NSD3Q9BZ95 1437 aa23.58■■□□□ 1.36
RACGAP1-213ENST00000548598 RGPD2P0DJD1 1756 aa23.57■■□□□ 1.36
RACGAP1-213ENST00000548598 R3HDM1Q15032 1099 aaKnown RBP23.57■■□□□ 1.36
RACGAP1-213ENST00000548598 FBLN1P23142 703 aa23.56■■□□□ 1.36
RACGAP1-213ENST00000548598 CARD14Q9BXL6 1004 aa23.56■■□□□ 1.36
RACGAP1-213ENST00000548598 PTF1AQ7RTS3 328 aa23.55■■□□□ 1.36
RACGAP1-213ENST00000548598 ANKRD26Q9UPS8 1709 aa23.55■■□□□ 1.36
RACGAP1-213ENST00000548598 SHANK3Q9BYB0 1731 aa23.54■■□□□ 1.36
RACGAP1-213ENST00000548598 KIF24Q5T7B8 1368 aa23.53■■□□□ 1.36
RACGAP1-213ENST00000548598 AMPHP49418 695 aa23.53■■□□□ 1.36
RACGAP1-213ENST00000548598 RRS1Q15050 365 aaKnown RBP23.52■■□□□ 1.36
RACGAP1-213ENST00000548598 EIF4G2P78344 907 aaKnown RBP eCLIP23.51■■□□□ 1.35
RACGAP1-213ENST00000548598 LTV1Q96GA3 475 aaPredicted RBP23.5■■□□□ 1.35
RACGAP1-213ENST00000548598 FLT4P35916 1363 aa23.5■■□□□ 1.35
RACGAP1-213ENST00000548598 MEGF6O75095 1541 aa23.49■■□□□ 1.35
RACGAP1-213ENST00000548598 HSPA5P11021 654 aaKnown RBP23.49■■□□□ 1.35
RACGAP1-213ENST00000548598 BTAF1O14981 1849 aa23.49■■□□□ 1.35
RACGAP1-213ENST00000548598 INSRP06213 1382 aa23.49■■□□□ 1.35
RACGAP1-213ENST00000548598 NBPF14Q5TI25 921 aa23.48■■□□□ 1.35
RACGAP1-213ENST00000548598 SMG6Q86US8 1419 aaKnown RBP23.48■■□□□ 1.35
RACGAP1-213ENST00000548598 KCNQ2O43526 872 aa23.46■■□□□ 1.35
RACGAP1-213ENST00000548598 PROM2Q8N271 834 aa23.46■■□□□ 1.35
RACGAP1-213ENST00000548598 CASZ1Q86V15 1759 aa23.45■■□□□ 1.34
RACGAP1-213ENST00000548598 PAPPAQ13219 1627 aa23.44■■□□□ 1.34
RACGAP1-213ENST00000548598 CGNL1Q0VF96 1302 aa23.44■■□□□ 1.34
RACGAP1-213ENST00000548598 ANO8Q9HCE9 1232 aaPredicted RBP23.44■■□□□ 1.34
RACGAP1-213ENST00000548598 DOT1LQ8TEK3 1739 aa23.44■■□□□ 1.34
RACGAP1-213ENST00000548598 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
RACGAP1-213ENST00000548598 HSP90AB2PQ58FF8 381 aa23.43■■□□□ 1.34
RACGAP1-213ENST00000548598 NBPF6Q5VWK0 638 aa23.43■■□□□ 1.34
RACGAP1-213ENST00000548598 NBPF4Q96M43 638 aa23.43■■□□□ 1.34
RACGAP1-213ENST00000548598 NCAPD2Q15021 1401 aa23.42■■□□□ 1.34
RACGAP1-213ENST00000548598 ACSBG1Q96GR2 724 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms