RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 SHANK3Q9BYB0 1731 aa17.75■□□□□ 0.43
GCN1-204ENST00000548132 RGPD2P0DJD1 1756 aa17.75■□□□□ 0.43
GCN1-204ENST00000548132 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
GCN1-204ENST00000548132 ARHGEF25Q86VW2 580 aa17.73■□□□□ 0.43
GCN1-204ENST00000548132 USP35Q9P2H5 1018 aa17.73■□□□□ 0.43
GCN1-204ENST00000548132 AXIN2Q9Y2T1 843 aa17.73■□□□□ 0.43
GCN1-204ENST00000548132 NHSQ6T4R5 1651 aa17.73■□□□□ 0.43
GCN1-204ENST00000548132 USP47Q96K76 1375 aa17.72■□□□□ 0.43
GCN1-204ENST00000548132 TCP11L2Q8N4U5 519 aa17.72■□□□□ 0.43
GCN1-204ENST00000548132 ANKRD26Q9UPS8 1709 aa17.72■□□□□ 0.43
GCN1-204ENST00000548132 WDR17Q8IZU2 1322 aa17.72■□□□□ 0.43
GCN1-204ENST00000548132 ZNF692Q9BU19 519 aaPredicted RBP17.71■□□□□ 0.43
GCN1-204ENST00000548132 NME9Q86XW9 330 aa17.7■□□□□ 0.42
GCN1-204ENST00000548132 OVOS2A0A0G2JMS6 1433 aa17.7■□□□□ 0.42
GCN1-204ENST00000548132 TNS2Q63HR2 1409 aa17.7■□□□□ 0.42
GCN1-204ENST00000548132 NINLQ9Y2I6 1382 aa17.69■□□□□ 0.42
GCN1-204ENST00000548132 SLC12A5Q9H2X9 1139 aa17.69■□□□□ 0.42
GCN1-204ENST00000548132 ST20-MTHFSA0A0A6YYL1 179 aa17.68■□□□□ 0.42
GCN1-204ENST00000548132 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
GCN1-204ENST00000548132 THRAP3Q9Y2W1 955 aaKnown RBP17.68■□□□□ 0.42
GCN1-204ENST00000548132 CASZ1Q86V15 1759 aa17.68■□□□□ 0.42
GCN1-204ENST00000548132 BAG6P46379 1132 aa17.67■□□□□ 0.42
GCN1-204ENST00000548132 EN1Q05925 392 aaPredicted RBP17.67■□□□□ 0.42
GCN1-204ENST00000548132 PUS7Q96PZ0 661 aaKnown RBP17.67■□□□□ 0.42
GCN1-204ENST00000548132 SOX12O15370 315 aa17.66■□□□□ 0.42
GCN1-204ENST00000548132 EVA1CP58658 441 aa17.66■□□□□ 0.42
GCN1-204ENST00000548132 SF3B2Q13435 895 aaKnown RBP17.66■□□□□ 0.42
GCN1-204ENST00000548132 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.66■□□□□ 0.42
GCN1-204ENST00000548132 ANKRD36BQ8N2N9 1353 aa17.66■□□□□ 0.42
GCN1-204ENST00000548132 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
GCN1-204ENST00000548132 BCL9O00512 1426 aa17.65■□□□□ 0.42
GCN1-204ENST00000548132 KCNH5Q8NCM2 988 aa17.65■□□□□ 0.42
GCN1-204ENST00000548132 ERBB3P21860 1342 aa17.65■□□□□ 0.42
GCN1-204ENST00000548132 BTAF1O14981 1849 aa17.65■□□□□ 0.42
GCN1-204ENST00000548132 PARD3Q8TEW0 1356 aa17.65■□□□□ 0.42
GCN1-204ENST00000548132 DOT1LQ8TEK3 1739 aa17.64■□□□□ 0.41
GCN1-204ENST00000548132 TRIM37O94972 964 aa17.64■□□□□ 0.41
GCN1-204ENST00000548132 FAM196AQ6ZSG2 479 aa17.64■□□□□ 0.41
GCN1-204ENST00000548132 CAMKK2Q96RR4 588 aa17.64■□□□□ 0.41
GCN1-204ENST00000548132 TMC1Q8TDI8 760 aa17.63■□□□□ 0.41
GCN1-204ENST00000548132 EZH2Q15910 746 aaKnown RBP17.62■□□□□ 0.41
GCN1-204ENST00000548132 PSDA5PKW4 1024 aaPredicted RBP17.61■□□□□ 0.41
GCN1-204ENST00000548132 TOM1L2Q6ZVM7 507 aa17.61■□□□□ 0.41
GCN1-204ENST00000548132 CCDC7Q96M83 1385 aa17.61■□□□□ 0.41
GCN1-204ENST00000548132 PTF1AQ7RTS3 328 aa17.6■□□□□ 0.41
GCN1-204ENST00000548132 HDGFL2Q7Z4V5 671 aaPredicted RBP17.6■□□□□ 0.41
GCN1-204ENST00000548132 CARD10Q9BWT7 1032 aa17.6■□□□□ 0.41
GCN1-204ENST00000548132 CLSPNQ9HAW4 1339 aa17.59■□□□□ 0.41
GCN1-204ENST00000548132 PDE3BQ13370 1112 aa17.59■□□□□ 0.41
GCN1-204ENST00000548132 MARCH10Q8NA82 808 aaPredicted RBP17.58■□□□□ 0.4
GCN1-204ENST00000548132 TERF2IPQ9NYB0 399 aa17.58■□□□□ 0.4
GCN1-204ENST00000548132 TUBGCP6Q96RT7 1819 aa17.58■□□□□ 0.4
GCN1-204ENST00000548132 MEGF6O75095 1541 aa17.57■□□□□ 0.4
GCN1-204ENST00000548132 PKD1L3Q7Z443 1732 aa17.56■□□□□ 0.4
GCN1-204ENST00000548132 TOGARAM1Q9Y4F4 1720 aa17.56■□□□□ 0.4
GCN1-204ENST00000548132 DDB1Q16531 1140 aa17.56■□□□□ 0.4
GCN1-204ENST00000548132 RTL1A6NKG5 1358 aa17.55■□□□□ 0.4
GCN1-204ENST00000548132 APBA3O96018 575 aa17.55■□□□□ 0.4
GCN1-204ENST00000548132 MAP3K19Q56UN5 1328 aa17.54■□□□□ 0.4
GCN1-204ENST00000548132 R3HDM1Q15032 1099 aaKnown RBP17.54■□□□□ 0.4
GCN1-204ENST00000548132 LY75O60449 1722 aa17.54■□□□□ 0.4
GCN1-204ENST00000548132 QSER1Q2KHR3 1735 aa17.53■□□□□ 0.4
GCN1-204ENST00000548132 NSD3Q9BZ95 1437 aa17.53■□□□□ 0.4
GCN1-204ENST00000548132 CSB-PGBD3P0DP91 1061 aa17.52■□□□□ 0.4
GCN1-204ENST00000548132 FBLN1P23142 703 aa17.52■□□□□ 0.4
GCN1-204ENST00000548132 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.4
GCN1-204ENST00000548132 CDCA7Q9BWT1 371 aaPredicted RBP17.52■□□□□ 0.4
GCN1-204ENST00000548132 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
GCN1-204ENST00000548132 TMF1P82094 1093 aa17.51■□□□□ 0.39
GCN1-204ENST00000548132 ANO8Q9HCE9 1232 aaPredicted RBP17.51■□□□□ 0.39
GCN1-204ENST00000548132 TIMELESSQ9UNS1 1208 aa17.5■□□□□ 0.39
GCN1-204ENST00000548132 NCAPD2Q15021 1401 aa17.49■□□□□ 0.39
GCN1-204ENST00000548132 IP6K1Q92551 441 aa17.49■□□□□ 0.39
GCN1-204ENST00000548132 COL24A1Q17RW2 1714 aa17.48■□□□□ 0.39
GCN1-204ENST00000548132 FYB1O15117 783 aa17.48■□□□□ 0.39
GCN1-204ENST00000548132 HOXC9P31274 260 aa17.48■□□□□ 0.39
GCN1-204ENST00000548132 PCGF6Q9BYE7 350 aa17.48■□□□□ 0.39
GCN1-204ENST00000548132 C11orf95C9JLR9 678 aaPredicted RBP17.47■□□□□ 0.39
GCN1-204ENST00000548132 COG3Q96JB2 828 aa17.47■□□□□ 0.39
GCN1-204ENST00000548132 CARD14Q9BXL6 1004 aa17.47■□□□□ 0.39
GCN1-204ENST00000548132 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
GCN1-204ENST00000548132 NLRP2Q9NX02 1062 aa17.47■□□□□ 0.39
GCN1-204ENST00000548132 NSD2O96028 1365 aa17.46■□□□□ 0.39
GCN1-204ENST00000548132 PROM2Q8N271 834 aa17.46■□□□□ 0.39
GCN1-204ENST00000548132 GGNBP2Q9H3C7 697 aa17.46■□□□□ 0.39
GCN1-204ENST00000548132 ITGB4P16144 1822 aa17.46■□□□□ 0.39
GCN1-204ENST00000548132 PLSCR1O15162 318 aa17.45■□□□□ 0.38
GCN1-204ENST00000548132 SLC24A1O60721 1099 aa17.45■□□□□ 0.38
GCN1-204ENST00000548132 IL2RBP14784 551 aa17.45■□□□□ 0.38
GCN1-204ENST00000548132 RRS1Q15050 365 aaKnown RBP17.45■□□□□ 0.38
GCN1-204ENST00000548132 KCNQ2O43526 872 aa17.44■□□□□ 0.38
GCN1-204ENST00000548132 FLT4P35916 1363 aa17.43■□□□□ 0.38
GCN1-204ENST00000548132 KAT6BQ8WYB5 2073 aa17.43■□□□□ 0.38
GCN1-204ENST00000548132 TAF1LQ8IZX4 1826 aa17.43■□□□□ 0.38
GCN1-204ENST00000548132 C5P01031 1676 aa17.42■□□□□ 0.38
GCN1-204ENST00000548132 INSRP06213 1382 aa17.41■□□□□ 0.38
GCN1-204ENST00000548132 KIF24Q5T7B8 1368 aa17.41■□□□□ 0.38
GCN1-204ENST00000548132 SMG6Q86US8 1419 aaKnown RBP17.41■□□□□ 0.38
GCN1-204ENST00000548132 EXOC5O00471 708 aa17.41■□□□□ 0.38
GCN1-204ENST00000548132 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms