RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 FBXO45P0C2W1 286 aa8.01□□□□□ -1.13
CBX5-203ENST00000547872 TRIM67Q6ZTA4 783 aa8.01□□□□□ -1.13
CBX5-203ENST00000547872 ZNF330Q9Y3S2 320 aaPredicted RBP8.01□□□□□ -1.13
CBX5-203ENST00000547872 EIF4G3O43432 1585 aaKnown RBP8.01□□□□□ -1.13
CBX5-203ENST00000547872 GFRA3O60609 400 aa8□□□□□ -1.13
CBX5-203ENST00000547872 GPR37L1O60883 481 aa8□□□□□ -1.13
CBX5-203ENST00000547872 NR1H3Q13133 447 aa8□□□□□ -1.13
CBX5-203ENST00000547872 ERFEQ4G0M1 354 aa8□□□□□ -1.13
CBX5-203ENST00000547872 SNIP1Q8TAD8 396 aaKnown RBP8□□□□□ -1.13
CBX5-203ENST00000547872 ADAM32Q8TC27 787 aa8□□□□□ -1.13
CBX5-203ENST00000547872 CLUAP1Q96AJ1 413 aa8□□□□□ -1.13
CBX5-203ENST00000547872 SLC10A4Q96EP9 437 aa8□□□□□ -1.13
CBX5-203ENST00000547872 C1QTNF2Q9BXJ5 285 aa8□□□□□ -1.13
CBX5-203ENST00000547872 IRX2Q9BZI1 471 aaPredicted RBP8□□□□□ -1.13
CBX5-203ENST00000547872 ALDH1A1P00352 501 aa7.99□□□□□ -1.13
CBX5-203ENST00000547872 ARID5BQ14865 1188 aa7.99□□□□□ -1.13
CBX5-203ENST00000547872 LAPTM4AQ15012 233 aa7.99□□□□□ -1.13
CBX5-203ENST00000547872 WASHC4Q2M389 1173 aa7.99□□□□□ -1.13
CBX5-203ENST00000547872 TLL2Q9Y6L7 1015 aa7.99□□□□□ -1.13
CBX5-203ENST00000547872 SIAH2O43255 324 aa7.98□□□□□ -1.13
CBX5-203ENST00000547872 IRF5Q13568 498 aa7.98□□□□□ -1.13
CBX5-203ENST00000547872 DZIP3Q86Y13 1208 aaKnown RBP7.98□□□□□ -1.13
CBX5-203ENST00000547872 TRMT44Q8IYL2 757 aaKnown RBP7.98□□□□□ -1.13
CBX5-203ENST00000547872 ZNF592Q92610 1267 aa7.98□□□□□ -1.13
CBX5-203ENST00000547872 OCSTAMPQ9BR26 566 aa7.98□□□□□ -1.13
CBX5-203ENST00000547872 CDV3Q9UKY7 258 aaKnown RBP7.98□□□□□ -1.13
CBX5-203ENST00000547872 PCDHB9Q9Y5E1 797 aa7.98□□□□□ -1.13
CBX5-203ENST00000547872 NRG2O14511 850 aaPredicted RBP7.97□□□□□ -1.13
CBX5-203ENST00000547872 VASH1Q7L8A9 365 aaPredicted RBP7.97□□□□□ -1.13
CBX5-203ENST00000547872 TOR4AQ9NXH8 423 aa7.97□□□□□ -1.13
CBX5-203ENST00000547872 WASF2Q9Y6W5 498 aa7.97□□□□□ -1.13
CBX5-203ENST00000547872 FAM187AA6NFU0 413 aa7.96□□□□□ -1.14
CBX5-203ENST00000547872 EIF4G2P78344 907 aaKnown RBP eCLIP7.96□□□□□ -1.14
CBX5-203ENST00000547872 VAC14Q08AM6 782 aa7.96□□□□□ -1.14
CBX5-203ENST00000547872 PROSER2Q86WR7 435 aaPredicted RBP7.96□□□□□ -1.14
CBX5-203ENST00000547872 MPNDQ8N594 471 aa7.96□□□□□ -1.14
CBX5-203ENST00000547872 MAP4K5Q9Y4K4 846 aa7.96□□□□□ -1.14
CBX5-203ENST00000547872 A6NJR5 290 aa7.95□□□□□ -1.14
CBX5-203ENST00000547872 NBPF20Q3BBV1 942 aa7.95□□□□□ -1.14
CBX5-203ENST00000547872 C14orf37Q86TY3 774 aa7.95□□□□□ -1.14
CBX5-203ENST00000547872 CDK15Q96Q40 435 aa7.95□□□□□ -1.14
CBX5-203ENST00000547872 J3QL48 77 aa7.94□□□□□ -1.14
CBX5-203ENST00000547872 ADH1CP00326 375 aa7.94□□□□□ -1.14
CBX5-203ENST00000547872 MCCD1P59942 119 aaPredicted RBP7.94□□□□□ -1.14
CBX5-203ENST00000547872 FSHRP23945 695 aa7.93□□□□□ -1.14
CBX5-203ENST00000547872 PKDCCQ504Y2 493 aa7.93□□□□□ -1.14
CBX5-203ENST00000547872 IFT140Q96RY7 1462 aa7.93□□□□□ -1.14
CBX5-203ENST00000547872 PRDM2Q13029 1718 aa7.92□□□□□ -1.14
CBX5-203ENST00000547872 SMPD1P17405 629 aa7.92□□□□□ -1.14
CBX5-203ENST00000547872 SOX11P35716 441 aa7.92□□□□□ -1.14
CBX5-203ENST00000547872 KCTD15Q96SI1 283 aaPredicted RBP7.92□□□□□ -1.14
CBX5-203ENST00000547872 CFTRP13569 1480 aa7.92□□□□□ -1.14
CBX5-203ENST00000547872 SEMA3FQ13275 785 aa7.91□□□□□ -1.14
CBX5-203ENST00000547872 NR5A1Q13285 461 aa7.91□□□□□ -1.14
CBX5-203ENST00000547872 NNTQ13423 1086 aa7.91□□□□□ -1.14
CBX5-203ENST00000547872 ERICH6Q7L0X2 663 aa7.91□□□□□ -1.14
CBX5-203ENST00000547872 ZMYND15Q9H091 742 aa7.91□□□□□ -1.14
CBX5-203ENST00000547872 AQRO60306 1485 aaKnown RBP eCLIP7.91□□□□□ -1.14
CBX5-203ENST00000547872 DGAT1O75907 488 aa7.9□□□□□ -1.14
CBX5-203ENST00000547872 RAB15P59190 212 aa7.9□□□□□ -1.14
CBX5-203ENST00000547872 GRM5P41594 1212 aa7.89□□□□□ -1.15
CBX5-203ENST00000547872 FNBP4Q8N3X1 1017 aaPredicted RBP7.89□□□□□ -1.15
CBX5-203ENST00000547872 TOPBP1Q92547 1522 aa7.88□□□□□ -1.15
CBX5-203ENST00000547872 POM121CA8CG34 1229 aa7.88□□□□□ -1.15
CBX5-203ENST00000547872 DHX9Q08211 1270 aaKnown RBP7.88□□□□□ -1.15
CBX5-203ENST00000547872 INTS6LQ5JSJ4 861 aaKnown RBP7.88□□□□□ -1.15
CBX5-203ENST00000547872 RNF20Q5VTR2 975 aa7.88□□□□□ -1.15
CBX5-203ENST00000547872 Q6ZNB5 142 aa7.88□□□□□ -1.15
CBX5-203ENST00000547872 CCDC116Q8IYX3 515 aa7.88□□□□□ -1.15
CBX5-203ENST00000547872 HPS1Q92902 700 aa7.88□□□□□ -1.15
CBX5-203ENST00000547872 RSF1Q96T23 1441 aaPredicted RBP7.87□□□□□ -1.15
CBX5-203ENST00000547872 TRAK2O60296 914 aa7.87□□□□□ -1.15
CBX5-203ENST00000547872 GIGYF1O75420 1035 aaPredicted RBP7.87□□□□□ -1.15
CBX5-203ENST00000547872 NR3C2P08235 984 aa7.87□□□□□ -1.15
CBX5-203ENST00000547872 SEPT12Q8IYM1 358 aa7.87□□□□□ -1.15
CBX5-203ENST00000547872 CEP126Q9P2H0 1117 aa7.87□□□□□ -1.15
CBX5-203ENST00000547872 ESPNB1AK53 854 aa7.86□□□□□ -1.15
CBX5-203ENST00000547872 WDR4P57081 412 aaKnown RBP7.86□□□□□ -1.15
CBX5-203ENST00000547872 SLFNL1Q499Z3 407 aa7.86□□□□□ -1.15
CBX5-203ENST00000547872 PGPEP1Q9NXJ5 209 aa7.86□□□□□ -1.15
CBX5-203ENST00000547872 EMILIN1Q9Y6C2 1016 aa7.86□□□□□ -1.15
CBX5-203ENST00000547872 AVPP01185 164 aa7.85□□□□□ -1.15
CBX5-203ENST00000547872 PPP1R26Q5T8A7 1209 aaPredicted RBP7.85□□□□□ -1.15
CBX5-203ENST00000547872 TRIM52Q96A61 297 aa7.85□□□□□ -1.15
CBX5-203ENST00000547872 TOP2AP11388 1531 aaKnown RBP7.84□□□□□ -1.15
CBX5-203ENST00000547872 SNAPC4Q5SXM2 1469 aa7.84□□□□□ -1.15
CBX5-203ENST00000547872 CTC1Q2NKJ3 1217 aa7.84□□□□□ -1.15
CBX5-203ENST00000547872 HDGFL1Q5TGJ6 251 aa7.84□□□□□ -1.15
CBX5-203ENST00000547872 CCDC125Q86Z20 511 aa7.84□□□□□ -1.15
CBX5-203ENST00000547872 RNF135Q8IUD6 432 aa7.84□□□□□ -1.15
CBX5-203ENST00000547872 GLMNQ92990 594 aa7.84□□□□□ -1.15
CBX5-203ENST00000547872 ALG2Q9H553 416 aa7.84□□□□□ -1.15
CBX5-203ENST00000547872 SYNJ1O43426 1573 aa7.84□□□□□ -1.15
CBX5-203ENST00000547872 TARBP1Q13395 1621 aaKnown RBP7.83□□□□□ -1.16
CBX5-203ENST00000547872 ERVH48-1M5A8F1 160 aa7.83□□□□□ -1.16
CBX5-203ENST00000547872 AXIN1O15169 862 aa7.83□□□□□ -1.16
CBX5-203ENST00000547872 ZIC2O95409 532 aaPredicted RBP7.83□□□□□ -1.16
CBX5-203ENST00000547872 CALR3Q96L12 384 aaKnown RBP7.83□□□□□ -1.16
CBX5-203ENST00000547872 ZNF777Q9ULD5 760 aaPredicted RBP7.83□□□□□ -1.16
CBX5-203ENST00000547872 PCDHB11Q9Y5F2 797 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms