RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 SOX12O15370 315 aa32.8■■■□□ 2.84
SMARCD1-204ENST00000547637 CPSF1Q10570 1443 aaKnown RBP32.79■■■□□ 2.84
SMARCD1-204ENST00000547637 AXIN2Q9Y2T1 843 aa32.79■■■□□ 2.84
SMARCD1-204ENST00000547637 CARD11Q9BXL7 1154 aa32.78■■■□□ 2.84
SMARCD1-204ENST00000547637 AKAP12Q02952 1782 aa32.76■■■□□ 2.84
SMARCD1-204ENST00000547637 PLSCR1O15162 318 aa32.76■■■□□ 2.83
SMARCD1-204ENST00000547637 CARD10Q9BWT7 1032 aa32.76■■■□□ 2.83
SMARCD1-204ENST00000547637 SBNO2Q9Y2G9 1366 aa32.74■■■□□ 2.83
SMARCD1-204ENST00000547637 COL18A1P39060 1754 aa32.74■■■□□ 2.83
SMARCD1-204ENST00000547637 RREB1Q92766 1687 aa32.74■■■□□ 2.83
SMARCD1-204ENST00000547637 BCL11BQ9C0K0 894 aaPredicted RBP32.73■■■□□ 2.83
SMARCD1-204ENST00000547637 EXOC5O00471 708 aa32.72■■■□□ 2.83
SMARCD1-204ENST00000547637 HDGFL2Q7Z4V5 671 aaPredicted RBP32.72■■■□□ 2.83
SMARCD1-204ENST00000547637 TMC1Q8TDI8 760 aa32.72■■■□□ 2.83
SMARCD1-204ENST00000547637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.7■■■□□ 2.83
SMARCD1-204ENST00000547637 NUP188Q5SRE5 1749 aa32.7■■■□□ 2.83
SMARCD1-204ENST00000547637 TONSLQ96HA7 1378 aa32.69■■■□□ 2.82
SMARCD1-204ENST00000547637 CCDC7Q96M83 1385 aa32.69■■■□□ 2.82
SMARCD1-204ENST00000547637 SPON1Q9HCB6 807 aa32.68■■■□□ 2.82
SMARCD1-204ENST00000547637 PPP1R1BQ9UD71 204 aaPredicted RBP32.68■■■□□ 2.82
SMARCD1-204ENST00000547637 LRRC37A3O60309 1634 aa32.68■■■□□ 2.82
SMARCD1-204ENST00000547637 MARCH10Q8NA82 808 aaPredicted RBP32.67■■■□□ 2.82
SMARCD1-204ENST00000547637 PEAK1Q9H792 1746 aa32.65■■■□□ 2.82
SMARCD1-204ENST00000547637 TERF2IPQ9NYB0 399 aa32.65■■■□□ 2.82
SMARCD1-204ENST00000547637 RGPD5Q99666 1765 aa32.65■■■□□ 2.82
SMARCD1-204ENST00000547637 BCL9O00512 1426 aa32.64■■■□□ 2.82
SMARCD1-204ENST00000547637 ABCC6O95255 1503 aa32.64■■■□□ 2.82
SMARCD1-204ENST00000547637 USP31Q70CQ4 1352 aa32.64■■■□□ 2.82
SMARCD1-204ENST00000547637 SBF2Q86WG5 1849 aa32.64■■■□□ 2.82
SMARCD1-204ENST00000547637 KCNQ2O43526 872 aa32.63■■■□□ 2.81
SMARCD1-204ENST00000547637 DCAF8L1A6NGE4 600 aa32.62■■■□□ 2.81
SMARCD1-204ENST00000547637 SLC24A1O60721 1099 aa32.62■■■□□ 2.81
SMARCD1-204ENST00000547637 PUS7Q96PZ0 661 aaKnown RBP32.62■■■□□ 2.81
SMARCD1-204ENST00000547637 RGPD3A6NKT7 1758 aaPredicted RBP32.62■■■□□ 2.81
SMARCD1-204ENST00000547637 RGPD4Q7Z3J3 1758 aa32.62■■■□□ 2.81
SMARCD1-204ENST00000547637 NFAT5O94916 1531 aa32.61■■■□□ 2.81
SMARCD1-204ENST00000547637 WNK3Q9BYP7 1800 aa32.61■■■□□ 2.81
SMARCD1-204ENST00000547637 MON2Q7Z3U7 1717 aa32.61■■■□□ 2.81
SMARCD1-204ENST00000547637 NLRP2Q9NX02 1062 aa32.6■■■□□ 2.81
SMARCD1-204ENST00000547637 NME9Q86XW9 330 aa32.59■■■□□ 2.81
SMARCD1-204ENST00000547637 SLC12A5Q9H2X9 1139 aa32.59■■■□□ 2.81
SMARCD1-204ENST00000547637 EDC4Q6P2E9 1401 aaKnown RBP32.55■■■□□ 2.8
SMARCD1-204ENST00000547637 ERBB3P21860 1342 aa32.54■■■□□ 2.8
SMARCD1-204ENST00000547637 IL2RBP14784 551 aa32.53■■■□□ 2.8
SMARCD1-204ENST00000547637 PTF1AQ7RTS3 328 aa32.53■■■□□ 2.8
SMARCD1-204ENST00000547637 STK32BQ9NY57 414 aa32.53■■■□□ 2.8
SMARCD1-204ENST00000547637 CD163L1Q9NR16 1453 aa32.51■■■□□ 2.79
SMARCD1-204ENST00000547637 TXNRD1Q16881 649 aa32.51■■■□□ 2.79
SMARCD1-204ENST00000547637 ANKRD24Q8TF21 1146 aa32.51■■■□□ 2.79
SMARCD1-204ENST00000547637 TNS2Q63HR2 1409 aa32.51■■■□□ 2.79
SMARCD1-204ENST00000547637 USP54Q70EL1 1684 aa32.5■■■□□ 2.79
SMARCD1-204ENST00000547637 NINLQ9Y2I6 1382 aa32.49■■■□□ 2.79
SMARCD1-204ENST00000547637 PROM2Q8N271 834 aa32.49■■■□□ 2.79
SMARCD1-204ENST00000547637 ANO8Q9HCE9 1232 aaPredicted RBP32.47■■■□□ 2.79
SMARCD1-204ENST00000547637 LTN1O94822 1766 aa32.47■■■□□ 2.79
SMARCD1-204ENST00000547637 A0A1W2PP64 1363 aa32.46■■■□□ 2.79
SMARCD1-204ENST00000547637 KAT6BQ8WYB5 2073 aa32.46■■■□□ 2.79
SMARCD1-204ENST00000547637 COG3Q96JB2 828 aa32.44■■■□□ 2.78
SMARCD1-204ENST00000547637 ST20-MTHFSA0A0A6YYL1 179 aa32.43■■■□□ 2.78
SMARCD1-204ENST00000547637 SLC15A2Q16348 729 aa32.43■■■□□ 2.78
SMARCD1-204ENST00000547637 IP6K1Q92551 441 aa32.43■■■□□ 2.78
SMARCD1-204ENST00000547637 ACSBG1Q96GR2 724 aa32.43■■■□□ 2.78
SMARCD1-204ENST00000547637 ZBTB7AO95365 584 aa32.39■■■□□ 2.78
SMARCD1-204ENST00000547637 YY1P25490 414 aa32.39■■■□□ 2.78
SMARCD1-204ENST00000547637 AMPHP49418 695 aa32.37■■■□□ 2.77
SMARCD1-204ENST00000547637 LTV1Q96GA3 475 aaPredicted RBP32.37■■■□□ 2.77
SMARCD1-204ENST00000547637 TESK2Q96S53 571 aa32.37■■■□□ 2.77
SMARCD1-204ENST00000547637 NHSQ6T4R5 1651 aa32.35■■■□□ 2.77
SMARCD1-204ENST00000547637 ATF5Q9Y2D1 282 aaPredicted RBP32.34■■■□□ 2.77
SMARCD1-204ENST00000547637 CASZ1Q86V15 1759 aa32.34■■■□□ 2.77
SMARCD1-204ENST00000547637 TMF1P82094 1093 aa32.33■■■□□ 2.77
SMARCD1-204ENST00000547637 DDX54Q8TDD1 881 aaKnown RBP32.33■■■□□ 2.77
SMARCD1-204ENST00000547637 PDGFDQ9GZP0 370 aaPredicted RBP32.33■■■□□ 2.77
SMARCD1-204ENST00000547637 MTFR1LQ9H019 292 aa32.33■■■□□ 2.77
SMARCD1-204ENST00000547637 HOXC9P31274 260 aa32.29■■■□□ 2.76
SMARCD1-204ENST00000547637 CDCA8Q53HL2 280 aa32.29■■■□□ 2.76
SMARCD1-204ENST00000547637 FAM208AQ9UK61 1670 aaKnown RBP32.29■■■□□ 2.76
SMARCD1-204ENST00000547637 MAP3K19Q56UN5 1328 aa32.28■■■□□ 2.76
SMARCD1-204ENST00000547637 ANKRD36BQ8N2N9 1353 aa32.28■■■□□ 2.76
SMARCD1-204ENST00000547637 PTGER2P43116 358 aa32.27■■■□□ 2.76
SMARCD1-204ENST00000547637 TRIM26Q12899 539 aaPredicted RBP32.27■■■□□ 2.76
SMARCD1-204ENST00000547637 SLC27A3Q5K4L6 730 aa32.25■■■□□ 2.75
SMARCD1-204ENST00000547637 BTAF1O14981 1849 aa32.24■■■□□ 2.75
SMARCD1-204ENST00000547637 SYTL4Q96C24 671 aaPredicted RBP32.23■■■□□ 2.75
SMARCD1-204ENST00000547637 ZCRB1Q8TBF4 217 aaKnown RBP32.22■■■□□ 2.75
SMARCD1-204ENST00000547637 RTL1A6NKG5 1358 aa32.2■■■□□ 2.75
SMARCD1-204ENST00000547637 SMG6Q86US8 1419 aaKnown RBP32.19■■■□□ 2.74
SMARCD1-204ENST00000547637 FYB1O15117 783 aa32.19■■■□□ 2.74
SMARCD1-204ENST00000547637 SYT17Q9BSW7 474 aa32.19■■■□□ 2.74
SMARCD1-204ENST00000547637 FHDC1Q9C0D6 1143 aaPredicted RBP32.19■■■□□ 2.74
SMARCD1-204ENST00000547637 USP47Q96K76 1375 aa32.19■■■□□ 2.74
SMARCD1-204ENST00000547637 ARXQ96QS3 562 aa32.18■■■□□ 2.74
SMARCD1-204ENST00000547637 GGNBP2Q9H3C7 697 aa32.18■■■□□ 2.74
SMARCD1-204ENST00000547637 CGNL1Q0VF96 1302 aa32.18■■■□□ 2.74
SMARCD1-204ENST00000547637 FBLN1P23142 703 aa32.17■■■□□ 2.74
SMARCD1-204ENST00000547637 PRIM1P49642 420 aaKnown RBP32.17■■■□□ 2.74
SMARCD1-204ENST00000547637 SLC16A10Q8TF71 515 aa32.17■■■□□ 2.74
SMARCD1-204ENST00000547637 MYOM1P52179 1685 aa32.16■■■□□ 2.74
SMARCD1-204ENST00000547637 RRS1Q15050 365 aaKnown RBP32.16■■■□□ 2.74
SMARCD1-204ENST00000547637 RAPGEF4Q8WZA2 1011 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms