RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 AXIN2Q9Y2T1 843 aa28.14■■■□□ 2.1
C12orf49-203ENST00000547630 ANKRD26Q9UPS8 1709 aa28.13■■■□□ 2.09
C12orf49-203ENST00000547630 NSD2O96028 1365 aa28.13■■■□□ 2.09
C12orf49-203ENST00000547630 AMER1Q5JTC6 1135 aaPredicted RBP28.12■■■□□ 2.09
C12orf49-203ENST00000547630 GJD4Q96KN9 370 aaPredicted RBP28.12■■■□□ 2.09
C12orf49-203ENST00000547630 MAP3K19Q56UN5 1328 aa28.12■■■□□ 2.09
C12orf49-203ENST00000547630 RRS1Q15050 365 aaKnown RBP28.11■■■□□ 2.09
C12orf49-203ENST00000547630 COL5A2P05997 1499 aaPredicted RBP28.1■■■□□ 2.09
C12orf49-203ENST00000547630 RGPD5Q99666 1765 aa28.1■■■□□ 2.09
C12orf49-203ENST00000547630 ABCC6O95255 1503 aa28.09■■■□□ 2.09
C12orf49-203ENST00000547630 GLI3P10071 1580 aa28.08■■■□□ 2.09
C12orf49-203ENST00000547630 TNNT2P45379 298 aaPredicted RBP28.08■■■□□ 2.09
C12orf49-203ENST00000547630 AMPHP49418 695 aa28.08■■■□□ 2.09
C12orf49-203ENST00000547630 LARP1Q6PKG0 1096 aaKnown RBP28.08■■■□□ 2.09
C12orf49-203ENST00000547630 MORC1Q86VD1 984 aa28.08■■■□□ 2.09
C12orf49-203ENST00000547630 IP6K1Q92551 441 aa28.07■■■□□ 2.08
C12orf49-203ENST00000547630 SPATA31A5Q5VU36 1347 aa28.06■■■□□ 2.08
C12orf49-203ENST00000547630 SPATA31A7Q8IWB4 1347 aa28.06■■■□□ 2.08
C12orf49-203ENST00000547630 CNGB1Q14028 1251 aaPredicted RBP28.05■■■□□ 2.08
C12orf49-203ENST00000547630 CC2D1BQ5T0F9 858 aaKnown RBP28.05■■■□□ 2.08
C12orf49-203ENST00000547630 HOXC9P31274 260 aa28.04■■■□□ 2.08
C12orf49-203ENST00000547630 CSB-PGBD3P0DP91 1061 aa28.03■■■□□ 2.08
C12orf49-203ENST00000547630 EMILIN1Q9Y6C2 1016 aa28.03■■■□□ 2.08
C12orf49-203ENST00000547630 SPATA31A1Q5TZJ5 1347 aa28.03■■■□□ 2.08
C12orf49-203ENST00000547630 DDX10Q13206 875 aaKnown RBP28.02■■■□□ 2.08
C12orf49-203ENST00000547630 USP35Q9P2H5 1018 aa28.02■■■□□ 2.08
C12orf49-203ENST00000547630 BLMP54132 1417 aaPredicted RBP28.02■■■□□ 2.08
C12orf49-203ENST00000547630 WDR17Q8IZU2 1322 aa28.02■■■□□ 2.08
C12orf49-203ENST00000547630 CDK12Q9NYV4 1490 aaPredicted RBP28.01■■■□□ 2.08
C12orf49-203ENST00000547630 RTL1A6NKG5 1358 aa28.01■■■□□ 2.08
C12orf49-203ENST00000547630 TOM1L2Q6ZVM7 507 aa28.01■■■□□ 2.07
C12orf49-203ENST00000547630 MAP2P11137 1827 aaKnown RBP28.01■■■□□ 2.07
C12orf49-203ENST00000547630 RGS12O14924 1447 aa28.01■■■□□ 2.07
C12orf49-203ENST00000547630 CRB1P82279 1406 aa28.01■■■□□ 2.07
C12orf49-203ENST00000547630 NPC1L1Q9UHC9 1359 aa28■■■□□ 2.07
C12orf49-203ENST00000547630 ANKRD24Q8TF21 1146 aa28■■■□□ 2.07
C12orf49-203ENST00000547630 ERBB3P21860 1342 aa28■■■□□ 2.07
C12orf49-203ENST00000547630 PEAK1Q9H792 1746 aa28■■■□□ 2.07
C12orf49-203ENST00000547630 ZNF316A6NFI3 1004 aaPredicted RBP27.99■■■□□ 2.07
C12orf49-203ENST00000547630 PPM1GO15355 546 aaPredicted RBP27.99■■■□□ 2.07
C12orf49-203ENST00000547630 POLKQ9UBT6 870 aa27.99■■■□□ 2.07
C12orf49-203ENST00000547630 FAM98CQ17RN3 349 aaKnown RBP27.99■■■□□ 2.07
C12orf49-203ENST00000547630 LTV1Q96GA3 475 aaPredicted RBP27.99■■■□□ 2.07
C12orf49-203ENST00000547630 FLT4P35916 1363 aa27.98■■■□□ 2.07
C12orf49-203ENST00000547630 KIF24Q5T7B8 1368 aa27.97■■■□□ 2.07
C12orf49-203ENST00000547630 HSP90AB2PQ58FF8 381 aa27.96■■■□□ 2.07
C12orf49-203ENST00000547630 TCP11L2Q8N4U5 519 aa27.96■■■□□ 2.07
C12orf49-203ENST00000547630 ONECUT3O60422 494 aaPredicted RBP27.95■■■□□ 2.06
C12orf49-203ENST00000547630 A0A0G2JS52 829 aa27.94■■■□□ 2.06
C12orf49-203ENST00000547630 MYT1Q01538 1121 aa27.94■■■□□ 2.06
C12orf49-203ENST00000547630 SEPT12Q8IYM1 358 aa27.94■■■□□ 2.06
C12orf49-203ENST00000547630 CARD10Q9BWT7 1032 aa27.94■■■□□ 2.06
C12orf49-203ENST00000547630 NLRP2Q9NX02 1062 aa27.94■■■□□ 2.06
C12orf49-203ENST00000547630 INSRP06213 1382 aa27.94■■■□□ 2.06
C12orf49-203ENST00000547630 THRAP3Q9Y2W1 955 aaKnown RBP27.93■■■□□ 2.06
C12orf49-203ENST00000547630 BARGINQ6ZT62 677 aa27.91■■■□□ 2.06
C12orf49-203ENST00000547630 SMG6Q86US8 1419 aaKnown RBP27.89■■■□□ 2.06
C12orf49-203ENST00000547630 FAM208AQ9UK61 1670 aaKnown RBP27.87■■■□□ 2.05
C12orf49-203ENST00000547630 THSD7AQ9UPZ6 1657 aa27.87■■■□□ 2.05
C12orf49-203ENST00000547630 RGPD2P0DJD1 1756 aa27.86■■■□□ 2.05
C12orf49-203ENST00000547630 BRWD3Q6RI45 1802 aa27.86■■■□□ 2.05
C12orf49-203ENST00000547630 MTHFSP49914 203 aa27.85■■■□□ 2.05
C12orf49-203ENST00000547630 NBPF6Q5VWK0 638 aa27.84■■■□□ 2.05
C12orf49-203ENST00000547630 NBPF4Q96M43 638 aa27.84■■■□□ 2.05
C12orf49-203ENST00000547630 WNK3Q9BYP7 1800 aa27.82■■■□□ 2.04
C12orf49-203ENST00000547630 EIF4A2Q14240 407 aaKnown RBP27.82■■■□□ 2.04
C12orf49-203ENST00000547630 USHBP1Q8N6Y0 703 aa27.81■■■□□ 2.04
C12orf49-203ENST00000547630 DISP2A7MBM2 1401 aa27.8■■■□□ 2.04
C12orf49-203ENST00000547630 KRT27Q7Z3Y8 459 aa27.8■■■□□ 2.04
C12orf49-203ENST00000547630 CDCA7Q9BWT1 371 aaPredicted RBP27.79■■■□□ 2.04
C12orf49-203ENST00000547630 PARP4Q9UKK3 1724 aaKnown RBP27.79■■■□□ 2.04
C12orf49-203ENST00000547630 PARD3Q8TEW0 1356 aa27.77■■■□□ 2.04
C12orf49-203ENST00000547630 IL2RBP14784 551 aa27.77■■■□□ 2.04
C12orf49-203ENST00000547630 PPP2R1AP30153 589 aa27.77■■■□□ 2.04
C12orf49-203ENST00000547630 EYA1Q99502 592 aa27.76■■■□□ 2.03
C12orf49-203ENST00000547630 PDE3BQ13370 1112 aa27.75■■■□□ 2.03
C12orf49-203ENST00000547630 DDB1Q16531 1140 aa27.75■■■□□ 2.03
C12orf49-203ENST00000547630 LRRC37A3O60309 1634 aa27.75■■■□□ 2.03
C12orf49-203ENST00000547630 SOCS7O14512 581 aa27.73■■■□□ 2.03
C12orf49-203ENST00000547630 FAM182BQ5T319 152 aa27.73■■■□□ 2.03
C12orf49-203ENST00000547630 EXOC5O00471 708 aa27.73■■■□□ 2.03
C12orf49-203ENST00000547630 IL13P35225 146 aa27.72■■■□□ 2.03
C12orf49-203ENST00000547630 RALBP1Q15311 655 aa27.71■■■□□ 2.03
C12orf49-203ENST00000547630 RAPGEF4Q8WZA2 1011 aa27.7■■■□□ 2.02
C12orf49-203ENST00000547630 NCAPD2Q15021 1401 aa27.69■■■□□ 2.02
C12orf49-203ENST00000547630 MEGF6O75095 1541 aa27.69■■■□□ 2.02
C12orf49-203ENST00000547630 DIAPH1O60610 1272 aaKnown RBP27.69■■■□□ 2.02
C12orf49-203ENST00000547630 IGSF1Q8N6C5 1336 aa27.69■■■□□ 2.02
C12orf49-203ENST00000547630 TATP17735 454 aaPredicted RBP27.68■■■□□ 2.02
C12orf49-203ENST00000547630 TNS2Q63HR2 1409 aa27.68■■■□□ 2.02
C12orf49-203ENST00000547630 COL3A1P02461 1466 aaPredicted RBP27.68■■■□□ 2.02
C12orf49-203ENST00000547630 CFAP53Q96M91 514 aa27.67■■■□□ 2.02
C12orf49-203ENST00000547630 OVOS2A0A0G2JMS6 1433 aa27.65■■■□□ 2.02
C12orf49-203ENST00000547630 MARCH10Q8NA82 808 aaPredicted RBP27.65■■■□□ 2.02
C12orf49-203ENST00000547630 UPF1Q92900 1129 aaKnown RBP eCLIP27.64■■■□□ 2.02
C12orf49-203ENST00000547630 RGPD1P0DJD0 1748 aa27.63■■■□□ 2.01
C12orf49-203ENST00000547630 ZCRB1Q8TBF4 217 aaKnown RBP27.63■■■□□ 2.01
C12orf49-203ENST00000547630 PRKRIP1Q9H875 184 aaPredicted RBP27.63■■■□□ 2.01
C12orf49-203ENST00000547630 SULT6B1Q6IMI4 303 aa27.61■■■□□ 2.01
C12orf49-203ENST00000547630 FAM196AQ6ZSG2 479 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms