RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
RAB5C-204ENST00000547517 BRWD3Q6RI45 1802 aa16.42■□□□□ 0.22
RAB5C-204ENST00000547517 LTN1O94822 1766 aa16.41■□□□□ 0.22
RAB5C-204ENST00000547517 ABCC6O95255 1503 aa16.41■□□□□ 0.22
RAB5C-204ENST00000547517 UPF1Q92900 1129 aaKnown RBP eCLIP16.4■□□□□ 0.22
RAB5C-204ENST00000547517 COG3Q96JB2 828 aa16.4■□□□□ 0.22
RAB5C-204ENST00000547517 RGPD5Q99666 1765 aa16.39■□□□□ 0.21
RAB5C-204ENST00000547517 AXIN2Q9Y2T1 843 aa16.39■□□□□ 0.21
RAB5C-204ENST00000547517 CRB1P82279 1406 aa16.38■□□□□ 0.21
RAB5C-204ENST00000547517 EP400Q96L91 3159 aa16.38■□□□□ 0.21
RAB5C-204ENST00000547517 ONECUT3O60422 494 aaPredicted RBP16.38■□□□□ 0.21
RAB5C-204ENST00000547517 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
RAB5C-204ENST00000547517 GGNBP2Q9H3C7 697 aa16.38■□□□□ 0.21
RAB5C-204ENST00000547517 C11orf95C9JLR9 678 aaPredicted RBP16.36■□□□□ 0.21
RAB5C-204ENST00000547517 FYB1O15117 783 aa16.36■□□□□ 0.21
RAB5C-204ENST00000547517 CSB-PGBD3P0DP91 1061 aa16.36■□□□□ 0.21
RAB5C-204ENST00000547517 TOM1L2Q6ZVM7 507 aa16.36■□□□□ 0.21
RAB5C-204ENST00000547517 KRT27Q7Z3Y8 459 aa16.36■□□□□ 0.21
RAB5C-204ENST00000547517 TCP11L2Q8N4U5 519 aa16.36■□□□□ 0.21
RAB5C-204ENST00000547517 WDR17Q8IZU2 1322 aa16.36■□□□□ 0.21
RAB5C-204ENST00000547517 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
RAB5C-204ENST00000547517 BARGINQ6ZT62 677 aa16.34■□□□□ 0.21
RAB5C-204ENST00000547517 KIF7Q2M1P5 1343 aa16.34■□□□□ 0.21
RAB5C-204ENST00000547517 THRAP3Q9Y2W1 955 aaKnown RBP16.33■□□□□ 0.2
RAB5C-204ENST00000547517 CGNL1Q0VF96 1302 aa16.33■□□□□ 0.2
RAB5C-204ENST00000547517 LRRC37A3O60309 1634 aa16.32■□□□□ 0.2
RAB5C-204ENST00000547517 ERBB3P21860 1342 aa16.32■□□□□ 0.2
RAB5C-204ENST00000547517 FBLN1P23142 703 aa16.32■□□□□ 0.2
RAB5C-204ENST00000547517 BLMP54132 1417 aaPredicted RBP16.32■□□□□ 0.2
RAB5C-204ENST00000547517 MAP3K19Q56UN5 1328 aa16.32■□□□□ 0.2
RAB5C-204ENST00000547517 PANK3Q9H999 370 aa16.32■□□□□ 0.2
RAB5C-204ENST00000547517 PARP4Q9UKK3 1724 aaKnown RBP16.32■□□□□ 0.2
RAB5C-204ENST00000547517 RRS1Q15050 365 aaKnown RBP16.31■□□□□ 0.2
RAB5C-204ENST00000547517 FAM182BQ5T319 152 aa16.3■□□□□ 0.2
RAB5C-204ENST00000547517 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
RAB5C-204ENST00000547517 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
RAB5C-204ENST00000547517 RTL1A6NKG5 1358 aa16.29■□□□□ 0.2
RAB5C-204ENST00000547517 HOXC9P31274 260 aa16.29■□□□□ 0.2
RAB5C-204ENST00000547517 AMPHP49418 695 aa16.29■□□□□ 0.2
RAB5C-204ENST00000547517 IP6K1Q92551 441 aa16.29■□□□□ 0.2
RAB5C-204ENST00000547517 CARD10Q9BWT7 1032 aa16.29■□□□□ 0.2
RAB5C-204ENST00000547517 FAM208AQ9UK61 1670 aaKnown RBP16.29■□□□□ 0.2
RAB5C-204ENST00000547517 CCDC7Q96M83 1385 aa16.28■□□□□ 0.2
RAB5C-204ENST00000547517 LTV1Q96GA3 475 aaPredicted RBP16.28■□□□□ 0.2
RAB5C-204ENST00000547517 NLRP2Q9NX02 1062 aa16.28■□□□□ 0.2
RAB5C-204ENST00000547517 PEAK1Q9H792 1746 aa16.28■□□□□ 0.2
RAB5C-204ENST00000547517 PDE3BQ13370 1112 aa16.27■□□□□ 0.2
RAB5C-204ENST00000547517 DISP2A7MBM2 1401 aa16.27■□□□□ 0.19
RAB5C-204ENST00000547517 NSD2O96028 1365 aa16.25■□□□□ 0.19
RAB5C-204ENST00000547517 FLT4P35916 1363 aa16.25■□□□□ 0.19
RAB5C-204ENST00000547517 WASHC2AQ641Q2 1341 aa16.24■□□□□ 0.19
RAB5C-204ENST00000547517 DDB1Q16531 1140 aa16.24■□□□□ 0.19
RAB5C-204ENST00000547517 CCDC125Q86Z20 511 aa16.24■□□□□ 0.19
RAB5C-204ENST00000547517 CDCA7Q9BWT1 371 aaPredicted RBP16.24■□□□□ 0.19
RAB5C-204ENST00000547517 EMILIN1Q9Y6C2 1016 aa16.24■□□□□ 0.19
RAB5C-204ENST00000547517 SMG6Q86US8 1419 aaKnown RBP16.24■□□□□ 0.19
RAB5C-204ENST00000547517 RGPD1P0DJD0 1748 aa16.24■□□□□ 0.19
RAB5C-204ENST00000547517 TNS2Q63HR2 1409 aa16.23■□□□□ 0.19
RAB5C-204ENST00000547517 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
RAB5C-204ENST00000547517 SF3B2Q13435 895 aaKnown RBP16.23■□□□□ 0.19
RAB5C-204ENST00000547517 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
RAB5C-204ENST00000547517 KIF24Q5T7B8 1368 aa16.23■□□□□ 0.19
RAB5C-204ENST00000547517 TNS1Q9HBL0 1735 aaKnown RBP16.22■□□□□ 0.19
RAB5C-204ENST00000547517 PPM1GO15355 546 aaPredicted RBP16.22■□□□□ 0.19
RAB5C-204ENST00000547517 RGPD2P0DJD1 1756 aa16.22■□□□□ 0.19
RAB5C-204ENST00000547517 OVOS2A0A0G2JMS6 1433 aa16.21■□□□□ 0.19
RAB5C-204ENST00000547517 HSP90AB2PQ58FF8 381 aa16.21■□□□□ 0.19
RAB5C-204ENST00000547517 FAM196AQ6ZSG2 479 aa16.21■□□□□ 0.19
RAB5C-204ENST00000547517 INSRP06213 1382 aa16.21■□□□□ 0.19
RAB5C-204ENST00000547517 IL2RBP14784 551 aa16.2■□□□□ 0.18
RAB5C-204ENST00000547517 TRIM37O94972 964 aa16.19■□□□□ 0.18
RAB5C-204ENST00000547517 DEFB132Q7Z7B7 95 aa16.19■□□□□ 0.18
RAB5C-204ENST00000547517 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
RAB5C-204ENST00000547517 MORC1Q86VD1 984 aa16.18■□□□□ 0.18
RAB5C-204ENST00000547517 EXOC5O00471 708 aa16.17■□□□□ 0.18
RAB5C-204ENST00000547517 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
RAB5C-204ENST00000547517 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
RAB5C-204ENST00000547517 POLKQ9UBT6 870 aa16.17■□□□□ 0.18
RAB5C-204ENST00000547517 MEGF6O75095 1541 aa16.17■□□□□ 0.18
RAB5C-204ENST00000547517 BAG6P46379 1132 aa16.16■□□□□ 0.18
RAB5C-204ENST00000547517 NBPF6Q5VWK0 638 aa16.16■□□□□ 0.18
RAB5C-204ENST00000547517 MARCH10Q8NA82 808 aaPredicted RBP16.16■□□□□ 0.18
RAB5C-204ENST00000547517 NBPF4Q96M43 638 aa16.16■□□□□ 0.18
RAB5C-204ENST00000547517 CC2D1BQ5T0F9 858 aaKnown RBP16.14■□□□□ 0.17
RAB5C-204ENST00000547517 SBF2Q86WG5 1849 aa16.13■□□□□ 0.17
RAB5C-204ENST00000547517 PER1O15534 1290 aaPredicted RBP16.13■□□□□ 0.17
RAB5C-204ENST00000547517 EN1Q05925 392 aaPredicted RBP16.13■□□□□ 0.17
RAB5C-204ENST00000547517 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
RAB5C-204ENST00000547517 BCL9O00512 1426 aa16.12■□□□□ 0.17
RAB5C-204ENST00000547517 SHANK3Q9BYB0 1731 aa16.12■□□□□ 0.17
RAB5C-204ENST00000547517 APBA3O96018 575 aa16.12■□□□□ 0.17
RAB5C-204ENST00000547517 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
RAB5C-204ENST00000547517 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
RAB5C-204ENST00000547517 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
RAB5C-204ENST00000547517 EIF4A2Q14240 407 aaKnown RBP16.1■□□□□ 0.17
RAB5C-204ENST00000547517 TATP17735 454 aaPredicted RBP16.09■□□□□ 0.17
RAB5C-204ENST00000547517 DDX54Q8TDD1 881 aaKnown RBP16.09■□□□□ 0.17
RAB5C-204ENST00000547517 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
RAB5C-204ENST00000547517 EZH2Q15910 746 aaKnown RBP16.08■□□□□ 0.16
RAB5C-204ENST00000547517 PTF1AQ7RTS3 328 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms