RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 USP17L18D6R9N7 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 USP17L22D6RA61 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 USP17L17D6RBQ6 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 USP17L19D6RCP7 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 USP17L20D6RJB6 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 USP17L24Q0WX57 530 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 MAP7D1Q3KQU3 841 aa12.2□□□□□ -0.46
HIF1A-205ENST00000547430 ATP5J2-PTCD1G3V325 749 aa12.19□□□□□ -0.46
HIF1A-205ENST00000547430 S1PR4O95977 384 aa12.19□□□□□ -0.46
HIF1A-205ENST00000547430 CRTC2Q53ET0 693 aaPredicted RBP12.19□□□□□ -0.46
HIF1A-205ENST00000547430 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
HIF1A-205ENST00000547430 BAP1Q92560 729 aa12.18□□□□□ -0.46
HIF1A-205ENST00000547430 CARD14Q9BXL6 1004 aa12.18□□□□□ -0.46
HIF1A-205ENST00000547430 FCF1Q9Y324 198 aaKnown RBP12.18□□□□□ -0.46
HIF1A-205ENST00000547430 PTK7Q13308 1070 aa12.17□□□□□ -0.46
HIF1A-205ENST00000547430 EML3Q32P44 896 aa12.17□□□□□ -0.46
HIF1A-205ENST00000547430 BPHLQ86WA6 291 aaPredicted RBP12.17□□□□□ -0.46
HIF1A-205ENST00000547430 ZNF511Q8NB15 262 aa12.17□□□□□ -0.46
HIF1A-205ENST00000547430 NKX2-3Q8TAU0 364 aa12.17□□□□□ -0.46
HIF1A-205ENST00000547430 MAGEB6P1A0A0J9YX57 407 aa12.16□□□□□ -0.46
HIF1A-205ENST00000547430 ERFEQ4G0M1 354 aa12.16□□□□□ -0.46
HIF1A-205ENST00000547430 LARP1Q6PKG0 1096 aaKnown RBP12.16□□□□□ -0.46
HIF1A-205ENST00000547430 FOXJ1Q92949 421 aa12.16□□□□□ -0.46
HIF1A-205ENST00000547430 RASA1P20936 1047 aa12.15□□□□□ -0.46
HIF1A-205ENST00000547430 LINC01559Q495D7 138 aa12.15□□□□□ -0.46
HIF1A-205ENST00000547430 C4orf48Q5BLP8 95 aa12.15□□□□□ -0.46
HIF1A-205ENST00000547430 B4GALNT3Q6L9W6 998 aa12.15□□□□□ -0.46
HIF1A-205ENST00000547430 NPM2Q86SE8 214 aaKnown RBP12.15□□□□□ -0.46
HIF1A-205ENST00000547430 TSGA10IPQ3SY00 556 aa12.14□□□□□ -0.47
HIF1A-205ENST00000547430 CCDC85AQ96PX6 553 aaPredicted RBP12.14□□□□□ -0.47
HIF1A-205ENST00000547430 C1QTNF2Q9BXJ5 285 aa12.14□□□□□ -0.47
HIF1A-205ENST00000547430 IVNS1ABPQ9Y6Y0 642 aa12.14□□□□□ -0.47
HIF1A-205ENST00000547430 MFAP1P55081 439 aaKnown RBP12.13□□□□□ -0.47
HIF1A-205ENST00000547430 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
HIF1A-205ENST00000547430 DOLKQ9UPQ8 538 aa12.12□□□□□ -0.47
HIF1A-205ENST00000547430 GNEQ9Y223 722 aaKnown RBP12.12□□□□□ -0.47
HIF1A-205ENST00000547430 GIGYF1O75420 1035 aaPredicted RBP12.11□□□□□ -0.47
HIF1A-205ENST00000547430 CLDN10P78369 228 aa12.11□□□□□ -0.47
HIF1A-205ENST00000547430 FAM69CQ0P6D2 419 aa12.11□□□□□ -0.47
HIF1A-205ENST00000547430 AGERQ15109 404 aa12.11□□□□□ -0.47
HIF1A-205ENST00000547430 TRIM50Q86XT4 487 aa12.11□□□□□ -0.47
HIF1A-205ENST00000547430 ANKMY2Q8IV38 441 aa12.11□□□□□ -0.47
HIF1A-205ENST00000547430 OGFOD1Q8N543 542 aa12.11□□□□□ -0.47
HIF1A-205ENST00000547430 RGS22Q8NE09 1264 aa12.11□□□□□ -0.47
HIF1A-205ENST00000547430 FAM200AQ8TCP9 573 aa12.11□□□□□ -0.47
HIF1A-205ENST00000547430 SLC10A4Q96EP9 437 aa12.11□□□□□ -0.47
HIF1A-205ENST00000547430 CDCA7Q9BWT1 371 aaPredicted RBP12.11□□□□□ -0.47
HIF1A-205ENST00000547430 NOD1Q9Y239 953 aa12.11□□□□□ -0.47
HIF1A-205ENST00000547430 TRMT44Q8IYL2 757 aaKnown RBP12.1□□□□□ -0.47
HIF1A-205ENST00000547430 ESPNB1AK53 854 aa12.09□□□□□ -0.47
HIF1A-205ENST00000547430 ATP1A2P50993 1020 aa12.09□□□□□ -0.47
HIF1A-205ENST00000547430 SH3BP2P78314 561 aa12.09□□□□□ -0.47
HIF1A-205ENST00000547430 RNF20Q5VTR2 975 aa12.09□□□□□ -0.47
HIF1A-205ENST00000547430 PHLDB3Q6NSJ2 640 aa12.09□□□□□ -0.47
HIF1A-205ENST00000547430 CLP1Q92989 425 aaKnown RBP12.09□□□□□ -0.47
HIF1A-205ENST00000547430 SLAIN2Q9P270 581 aa12.09□□□□□ -0.47
HIF1A-205ENST00000547430 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
HIF1A-205ENST00000547430 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
HIF1A-205ENST00000547430 DNAAF2Q9NVR5 837 aaKnown RBP12.08□□□□□ -0.48
HIF1A-205ENST00000547430 CDV3Q9UKY7 258 aaKnown RBP12.08□□□□□ -0.48
HIF1A-205ENST00000547430 DKK1O94907 266 aa12.07□□□□□ -0.48
HIF1A-205ENST00000547430 DPYDQ12882 1025 aa12.07□□□□□ -0.48
HIF1A-205ENST00000547430 SIX5Q8N196 739 aa12.07□□□□□ -0.48
HIF1A-205ENST00000547430 LARGE2Q8N3Y3 721 aa12.07□□□□□ -0.48
HIF1A-205ENST00000547430 PCDH10Q9P2E7 1040 aa12.07□□□□□ -0.48
HIF1A-205ENST00000547430 SSFA2P28290 1259 aa12.06□□□□□ -0.48
HIF1A-205ENST00000547430 SWI5Q1ZZU3 235 aa12.06□□□□□ -0.48
HIF1A-205ENST00000547430 OXLD1Q5BKU9 147 aa12.06□□□□□ -0.48
HIF1A-205ENST00000547430 POTEGQ6S5H5 508 aa12.06□□□□□ -0.48
HIF1A-205ENST00000547430 SND1Q7KZF4 910 aaKnown RBP eCLIP12.06□□□□□ -0.48
HIF1A-205ENST00000547430 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
HIF1A-205ENST00000547430 ZNF594Q96JF6 807 aaPredicted RBP12.06□□□□□ -0.48
HIF1A-205ENST00000547430 PPEF1O14829 653 aaPredicted RBP12.05□□□□□ -0.48
HIF1A-205ENST00000547430 ITGBL1O95965 494 aaPredicted RBP12.05□□□□□ -0.48
HIF1A-205ENST00000547430 TXNDC2Q86VQ3 553 aa12.05□□□□□ -0.48
HIF1A-205ENST00000547430 CCDC125Q86Z20 511 aa12.05□□□□□ -0.48
HIF1A-205ENST00000547430 KIAA1024Q9UPX6 916 aa12.05□□□□□ -0.48
HIF1A-205ENST00000547430 ZBTB7BO15156 539 aaPredicted RBP12.04□□□□□ -0.48
HIF1A-205ENST00000547430 GTF2IP78347 998 aa12.04□□□□□ -0.48
HIF1A-205ENST00000547430 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
HIF1A-205ENST00000547430 KCNC4Q03721 635 aa12.03□□□□□ -0.48
HIF1A-205ENST00000547430 RNF223E7ERA6 249 aa12.02□□□□□ -0.49
HIF1A-205ENST00000547430 TRIM32Q13049 653 aa12.02□□□□□ -0.49
HIF1A-205ENST00000547430 ANKLE1Q8NAG6 615 aa12.02□□□□□ -0.49
HIF1A-205ENST00000547430 CCER1Q8TC90 406 aaPredicted RBP12.02□□□□□ -0.49
HIF1A-205ENST00000547430 ZBTB24O43167 697 aaPredicted RBP12.01□□□□□ -0.49
HIF1A-205ENST00000547430 PLA2G2CQ5R387 149 aa12.01□□□□□ -0.49
HIF1A-205ENST00000547430 SIRT1Q96EB6 747 aa12.01□□□□□ -0.49
HIF1A-205ENST00000547430 PCDHB11Q9Y5F2 797 aa12.01□□□□□ -0.49
HIF1A-205ENST00000547430 PCDHGA11Q9Y5H2 935 aa12.01□□□□□ -0.49
HIF1A-205ENST00000547430 ATP2B4P23634 1241 aa12□□□□□ -0.49
HIF1A-205ENST00000547430 WNT7BP56706 349 aa12□□□□□ -0.49
HIF1A-205ENST00000547430 MAP4K5Q9Y4K4 846 aa12□□□□□ -0.49
HIF1A-205ENST00000547430 VARSP26640 1264 aaKnown RBP11.99□□□□□ -0.49
HIF1A-205ENST00000547430 SKOR1P84550 965 aa11.99□□□□□ -0.49
HIF1A-205ENST00000547430 USP4Q13107 963 aa11.99□□□□□ -0.49
HIF1A-205ENST00000547430 CCDC27Q2M243 656 aa11.99□□□□□ -0.49
HIF1A-205ENST00000547430 CCDC102BQ68D86 513 aa11.99□□□□□ -0.49
HIF1A-205ENST00000547430 KCTD15Q96SI1 283 aaPredicted RBP11.99□□□□□ -0.49
HIF1A-205ENST00000547430 HCSTQ9UBK5 93 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms