RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 COL5A2P05997 1499 aaPredicted RBP33.31■■■□□ 2.92
RBFOX1-209ENST00000547427 SPATA31A1Q5TZJ5 1347 aa33.3■■■□□ 2.92
RBFOX1-209ENST00000547427 ONECUT3O60422 494 aaPredicted RBP33.3■■■□□ 2.92
RBFOX1-209ENST00000547427 KIF20BQ96Q89 1820 aa33.3■■■□□ 2.92
RBFOX1-209ENST00000547427 FYB1O15117 783 aa33.27■■■□□ 2.92
RBFOX1-209ENST00000547427 GGNBP2Q9H3C7 697 aa33.27■■■□□ 2.92
RBFOX1-209ENST00000547427 AXIN2Q9Y2T1 843 aa33.27■■■□□ 2.92
RBFOX1-209ENST00000547427 NSD3Q9BZ95 1437 aa33.27■■■□□ 2.92
RBFOX1-209ENST00000547427 CARD14Q9BXL6 1004 aa33.26■■■□□ 2.91
RBFOX1-209ENST00000547427 UPF1Q92900 1129 aaKnown RBP eCLIP33.25■■■□□ 2.91
RBFOX1-209ENST00000547427 C11orf95C9JLR9 678 aaPredicted RBP33.24■■■□□ 2.91
RBFOX1-209ENST00000547427 CRB1P82279 1406 aa33.23■■■□□ 2.91
RBFOX1-209ENST00000547427 CSB-PGBD3P0DP91 1061 aa33.23■■■□□ 2.91
RBFOX1-209ENST00000547427 TOM1L2Q6ZVM7 507 aa33.23■■■□□ 2.91
RBFOX1-209ENST00000547427 ABCC6O95255 1503 aa33.23■■■□□ 2.91
RBFOX1-209ENST00000547427 TCP11L2Q8N4U5 519 aa33.22■■■□□ 2.91
RBFOX1-209ENST00000547427 KRT27Q7Z3Y8 459 aa33.21■■■□□ 2.91
RBFOX1-209ENST00000547427 WDR17Q8IZU2 1322 aa33.2■■■□□ 2.91
RBFOX1-209ENST00000547427 THSD7AQ9UPZ6 1657 aa33.19■■■□□ 2.9
RBFOX1-209ENST00000547427 BARGINQ6ZT62 677 aa33.18■■■□□ 2.9
RBFOX1-209ENST00000547427 THRAP3Q9Y2W1 955 aaKnown RBP33.18■■■□□ 2.9
RBFOX1-209ENST00000547427 CGNL1Q0VF96 1302 aa33.18■■■□□ 2.9
RBFOX1-209ENST00000547427 PANK3Q9H999 370 aa33.17■■■□□ 2.9
RBFOX1-209ENST00000547427 KIF7Q2M1P5 1343 aa33.15■■■□□ 2.9
RBFOX1-209ENST00000547427 FBLN1P23142 703 aa33.14■■■□□ 2.9
RBFOX1-209ENST00000547427 AMPHP49418 695 aa33.14■■■□□ 2.9
RBFOX1-209ENST00000547427 MAP3K19Q56UN5 1328 aa33.12■■■□□ 2.89
RBFOX1-209ENST00000547427 IP6K1Q92551 441 aa33.12■■■□□ 2.89
RBFOX1-209ENST00000547427 BLMP54132 1417 aaPredicted RBP33.1■■■□□ 2.89
RBFOX1-209ENST00000547427 ERBB3P21860 1342 aa33.09■■■□□ 2.89
RBFOX1-209ENST00000547427 RRS1Q15050 365 aaKnown RBP33.09■■■□□ 2.89
RBFOX1-209ENST00000547427 ANKRD24Q8TF21 1146 aa33.09■■■□□ 2.89
RBFOX1-209ENST00000547427 CARD10Q9BWT7 1032 aa33.09■■■□□ 2.89
RBFOX1-209ENST00000547427 NLRP2Q9NX02 1062 aa33.08■■■□□ 2.89
RBFOX1-209ENST00000547427 PDE3BQ13370 1112 aa33.07■■■□□ 2.88
RBFOX1-209ENST00000547427 HOXC9P31274 260 aa33.06■■■□□ 2.88
RBFOX1-209ENST00000547427 LTV1Q96GA3 475 aaPredicted RBP33.06■■■□□ 2.88
RBFOX1-209ENST00000547427 CCDC7Q96M83 1385 aa33.05■■■□□ 2.88
RBFOX1-209ENST00000547427 PARP4Q9UKK3 1724 aaKnown RBP33.05■■■□□ 2.88
RBFOX1-209ENST00000547427 ANKRD26Q9UPS8 1709 aa33.05■■■□□ 2.88
RBFOX1-209ENST00000547427 WNK3Q9BYP7 1800 aa33.05■■■□□ 2.88
RBFOX1-209ENST00000547427 FAM182BQ5T319 152 aa33.04■■■□□ 2.88
RBFOX1-209ENST00000547427 CCDC125Q86Z20 511 aa33.04■■■□□ 2.88
RBFOX1-209ENST00000547427 KNSTRNQ9Y448 316 aa33.04■■■□□ 2.88
RBFOX1-209ENST00000547427 RTL1A6NKG5 1358 aa33.03■■■□□ 2.88
RBFOX1-209ENST00000547427 CDCA7Q9BWT1 371 aaPredicted RBP33.02■■■□□ 2.88
RBFOX1-209ENST00000547427 EP400Q96L91 3159 aa33.01■■■□□ 2.87
RBFOX1-209ENST00000547427 FAM208AQ9UK61 1670 aaKnown RBP33.01■■■□□ 2.87
RBFOX1-209ENST00000547427 SF3B2Q13435 895 aaKnown RBP33■■■□□ 2.87
RBFOX1-209ENST00000547427 MAP2P11137 1827 aaKnown RBP33■■■□□ 2.87
RBFOX1-209ENST00000547427 DDB1Q16531 1140 aa32.99■■■□□ 2.87
RBFOX1-209ENST00000547427 WASHC2AQ641Q2 1341 aa32.98■■■□□ 2.87
RBFOX1-209ENST00000547427 NSD2O96028 1365 aa32.97■■■□□ 2.87
RBFOX1-209ENST00000547427 TNNT2P45379 298 aaPredicted RBP32.97■■■□□ 2.87
RBFOX1-209ENST00000547427 LRRC37A3O60309 1634 aa32.96■■■□□ 2.87
RBFOX1-209ENST00000547427 PPM1GO15355 546 aaPredicted RBP32.96■■■□□ 2.87
RBFOX1-209ENST00000547427 FLT4P35916 1363 aa32.96■■■□□ 2.87
RBFOX1-209ENST00000547427 FAM196AQ6ZSG2 479 aa32.95■■■□□ 2.87
RBFOX1-209ENST00000547427 EMILIN1Q9Y6C2 1016 aa32.95■■■□□ 2.87
RBFOX1-209ENST00000547427 KIF24Q5T7B8 1368 aa32.95■■■□□ 2.86
RBFOX1-209ENST00000547427 SMG6Q86US8 1419 aaKnown RBP32.94■■■□□ 2.86
RBFOX1-209ENST00000547427 PEAK1Q9H792 1746 aa32.94■■■□□ 2.86
RBFOX1-209ENST00000547427 RGPD2P0DJD1 1756 aa32.93■■■□□ 2.86
RBFOX1-209ENST00000547427 MORC1Q86VD1 984 aa32.92■■■□□ 2.86
RBFOX1-209ENST00000547427 DISP2A7MBM2 1401 aa32.92■■■□□ 2.86
RBFOX1-209ENST00000547427 EXOC5O00471 708 aa32.91■■■□□ 2.86
RBFOX1-209ENST00000547427 IL2RBP14784 551 aa32.91■■■□□ 2.86
RBFOX1-209ENST00000547427 HSP90AB2PQ58FF8 381 aa32.91■■■□□ 2.86
RBFOX1-209ENST00000547427 INSRP06213 1382 aa32.91■■■□□ 2.86
RBFOX1-209ENST00000547427 RGPD1P0DJD0 1748 aa32.9■■■□□ 2.86
RBFOX1-209ENST00000547427 POLKQ9UBT6 870 aa32.87■■■□□ 2.85
RBFOX1-209ENST00000547427 OVOS2A0A0G2JMS6 1433 aa32.85■■■□□ 2.85
RBFOX1-209ENST00000547427 TRIM37O94972 964 aa32.84■■■□□ 2.85
RBFOX1-209ENST00000547427 AMER1Q5JTC6 1135 aaPredicted RBP32.84■■■□□ 2.85
RBFOX1-209ENST00000547427 PER1O15534 1290 aaPredicted RBP32.83■■■□□ 2.85
RBFOX1-209ENST00000547427 BAG6P46379 1132 aa32.83■■■□□ 2.85
RBFOX1-209ENST00000547427 TNS2Q63HR2 1409 aa32.83■■■□□ 2.85
RBFOX1-209ENST00000547427 NBPF6Q5VWK0 638 aa32.82■■■□□ 2.84
RBFOX1-209ENST00000547427 DEFB132Q7Z7B7 95 aa32.82■■■□□ 2.84
RBFOX1-209ENST00000547427 NBPF4Q96M43 638 aa32.82■■■□□ 2.84
RBFOX1-209ENST00000547427 MARCH10Q8NA82 808 aaPredicted RBP32.81■■■□□ 2.84
RBFOX1-209ENST00000547427 USHBP1Q8N6Y0 703 aa32.8■■■□□ 2.84
RBFOX1-209ENST00000547427 CC2D1BQ5T0F9 858 aaKnown RBP32.79■■■□□ 2.84
RBFOX1-209ENST00000547427 TNS1Q9HBL0 1735 aaKnown RBP32.79■■■□□ 2.84
RBFOX1-209ENST00000547427 CNGB1Q14028 1251 aaPredicted RBP32.77■■■□□ 2.84
RBFOX1-209ENST00000547427 ZEB1P37275 1124 aaPredicted RBP32.76■■■□□ 2.83
RBFOX1-209ENST00000547427 SBF2Q86WG5 1849 aa32.76■■■□□ 2.83
RBFOX1-209ENST00000547427 RAPGEF4Q8WZA2 1011 aa32.75■■■□□ 2.83
RBFOX1-209ENST00000547427 APBA3O96018 575 aa32.74■■■□□ 2.83
RBFOX1-209ENST00000547427 EN1Q05925 392 aaPredicted RBP32.72■■■□□ 2.83
RBFOX1-209ENST00000547427 TATP17735 454 aaPredicted RBP32.71■■■□□ 2.83
RBFOX1-209ENST00000547427 DDX54Q8TDD1 881 aaKnown RBP32.71■■■□□ 2.83
RBFOX1-209ENST00000547427 KAT6BQ8WYB5 2073 aa32.71■■■□□ 2.83
RBFOX1-209ENST00000547427 MEGF6O75095 1541 aa32.71■■■□□ 2.83
RBFOX1-209ENST00000547427 EIF4A2Q14240 407 aaKnown RBP32.69■■■□□ 2.82
RBFOX1-209ENST00000547427 ZCRB1Q8TBF4 217 aaKnown RBP32.69■■■□□ 2.82
RBFOX1-209ENST00000547427 NPC1L1Q9UHC9 1359 aa32.69■■■□□ 2.82
RBFOX1-209ENST00000547427 BCL9O00512 1426 aa32.68■■■□□ 2.82
RBFOX1-209ENST00000547427 EYA1Q99502 592 aa32.67■■■□□ 2.82
RBFOX1-209ENST00000547427 BCL11BQ9C0K0 894 aaPredicted RBP32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms