RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 STRN4Q9NRL3 753 aa23.59■■□□□ 1.37
RBFOX1-207ENST00000547338 OVOS2A0A0J9YW53 1432 aa23.58■■□□□ 1.37
RBFOX1-207ENST00000547338 OVOS2Q6IE36 1432 aa23.58■■□□□ 1.37
RBFOX1-207ENST00000547338 LARP1Q6PKG0 1096 aaKnown RBP23.58■■□□□ 1.36
RBFOX1-207ENST00000547338 ARHGEF25Q86VW2 580 aa23.58■■□□□ 1.36
RBFOX1-207ENST00000547338 ANKRD36BQ8N2N9 1353 aa23.58■■□□□ 1.36
RBFOX1-207ENST00000547338 AXIN2Q9Y2T1 843 aa23.57■■□□□ 1.36
RBFOX1-207ENST00000547338 RGPD5Q99666 1765 aa23.55■■□□□ 1.36
RBFOX1-207ENST00000547338 SOX12O15370 315 aa23.54■■□□□ 1.36
RBFOX1-207ENST00000547338 KCNH5Q8NCM2 988 aa23.54■■□□□ 1.36
RBFOX1-207ENST00000547338 ZBTB7CA1YPR0 619 aa23.53■■□□□ 1.36
RBFOX1-207ENST00000547338 ABCC6O95255 1503 aa23.51■■□□□ 1.35
RBFOX1-207ENST00000547338 LTN1O94822 1766 aa23.51■■□□□ 1.35
RBFOX1-207ENST00000547338 EVA1CP58658 441 aa23.5■■□□□ 1.35
RBFOX1-207ENST00000547338 KRT27Q7Z3Y8 459 aa23.5■■□□□ 1.35
RBFOX1-207ENST00000547338 USP35Q9P2H5 1018 aa23.49■■□□□ 1.35
RBFOX1-207ENST00000547338 CRB1P82279 1406 aa23.49■■□□□ 1.35
RBFOX1-207ENST00000547338 CDCA8Q53HL2 280 aa23.49■■□□□ 1.35
RBFOX1-207ENST00000547338 BARGINQ6ZT62 677 aa23.49■■□□□ 1.35
RBFOX1-207ENST00000547338 CARD14Q9BXL6 1004 aa23.48■■□□□ 1.35
RBFOX1-207ENST00000547338 KIF7Q2M1P5 1343 aa23.47■■□□□ 1.35
RBFOX1-207ENST00000547338 A0A0G2JS52 829 aa23.46■■□□□ 1.35
RBFOX1-207ENST00000547338 MYT1Q01538 1121 aa23.46■■□□□ 1.35
RBFOX1-207ENST00000547338 TCP11L2Q8N4U5 519 aa23.46■■□□□ 1.35
RBFOX1-207ENST00000547338 FAM182BQ5T319 152 aa23.45■■□□□ 1.34
RBFOX1-207ENST00000547338 WDR17Q8IZU2 1322 aa23.45■■□□□ 1.34
RBFOX1-207ENST00000547338 C11orf95C9JLR9 678 aaPredicted RBP23.44■■□□□ 1.34
RBFOX1-207ENST00000547338 FYB1O15117 783 aa23.44■■□□□ 1.34
RBFOX1-207ENST00000547338 WNK3Q9BYP7 1800 aa23.44■■□□□ 1.34
RBFOX1-207ENST00000547338 PARP4Q9UKK3 1724 aaKnown RBP23.44■■□□□ 1.34
RBFOX1-207ENST00000547338 KIF20BQ96Q89 1820 aa23.43■■□□□ 1.34
RBFOX1-207ENST00000547338 BLMP54132 1417 aaPredicted RBP23.43■■□□□ 1.34
RBFOX1-207ENST00000547338 FBLN1P23142 703 aa23.43■■□□□ 1.34
RBFOX1-207ENST00000547338 THRAP3Q9Y2W1 955 aaKnown RBP23.42■■□□□ 1.34
RBFOX1-207ENST00000547338 NSD3Q9BZ95 1437 aa23.41■■□□□ 1.34
RBFOX1-207ENST00000547338 LRRC37A3O60309 1634 aa23.41■■□□□ 1.34
RBFOX1-207ENST00000547338 COG3Q96JB2 828 aa23.4■■□□□ 1.34
RBFOX1-207ENST00000547338 GGNBP2Q9H3C7 697 aa23.4■■□□□ 1.34
RBFOX1-207ENST00000547338 TOM1L2Q6ZVM7 507 aa23.39■■□□□ 1.34
RBFOX1-207ENST00000547338 CCDC125Q86Z20 511 aa23.39■■□□□ 1.34
RBFOX1-207ENST00000547338 ERBB3P21860 1342 aa23.39■■□□□ 1.33
RBFOX1-207ENST00000547338 PRKRIP1Q9H875 184 aaPredicted RBP23.38■■□□□ 1.33
RBFOX1-207ENST00000547338 DISP2A7MBM2 1401 aa23.38■■□□□ 1.33
RBFOX1-207ENST00000547338 MAP3K19Q56UN5 1328 aa23.37■■□□□ 1.33
RBFOX1-207ENST00000547338 CARD10Q9BWT7 1032 aa23.37■■□□□ 1.33
RBFOX1-207ENST00000547338 PEAK1Q9H792 1746 aa23.36■■□□□ 1.33
RBFOX1-207ENST00000547338 TNS1Q9HBL0 1735 aaKnown RBP23.36■■□□□ 1.33
RBFOX1-207ENST00000547338 PELP1Q8IZL8 1130 aaKnown RBP23.34■■□□□ 1.33
RBFOX1-207ENST00000547338 IP6K1Q92551 441 aa23.34■■□□□ 1.33
RBFOX1-207ENST00000547338 DEFB132Q7Z7B7 95 aa23.33■■□□□ 1.33
RBFOX1-207ENST00000547338 POLR3GLQ9BT43 218 aa23.33■■□□□ 1.33
RBFOX1-207ENST00000547338 RGPD1P0DJD0 1748 aa23.33■■□□□ 1.32
RBFOX1-207ENST00000547338 CSB-PGBD3P0DP91 1061 aa23.33■■□□□ 1.32
RBFOX1-207ENST00000547338 ANKRD24Q8TF21 1146 aa23.33■■□□□ 1.32
RBFOX1-207ENST00000547338 RRS1Q15050 365 aaKnown RBP23.32■■□□□ 1.32
RBFOX1-207ENST00000547338 HOXC9P31274 260 aa23.31■■□□□ 1.32
RBFOX1-207ENST00000547338 FAM208AQ9UK61 1670 aaKnown RBP23.29■■□□□ 1.32
RBFOX1-207ENST00000547338 PDE3BQ13370 1112 aa23.28■■□□□ 1.32
RBFOX1-207ENST00000547338 FAM196AQ6ZSG2 479 aa23.28■■□□□ 1.32
RBFOX1-207ENST00000547338 RGPD2P0DJD1 1756 aa23.28■■□□□ 1.32
RBFOX1-207ENST00000547338 RTL1A6NKG5 1358 aa23.28■■□□□ 1.32
RBFOX1-207ENST00000547338 PANK3Q9H999 370 aa23.28■■□□□ 1.32
RBFOX1-207ENST00000547338 NLRP2Q9NX02 1062 aa23.28■■□□□ 1.32
RBFOX1-207ENST00000547338 ANKRD26Q9UPS8 1709 aa23.27■■□□□ 1.32
RBFOX1-207ENST00000547338 DDB1Q16531 1140 aa23.26■■□□□ 1.31
RBFOX1-207ENST00000547338 CDCA7Q9BWT1 371 aaPredicted RBP23.26■■□□□ 1.31
RBFOX1-207ENST00000547338 CGNL1Q0VF96 1302 aa23.26■■□□□ 1.31
RBFOX1-207ENST00000547338 SBF2Q86WG5 1849 aa23.25■■□□□ 1.31
RBFOX1-207ENST00000547338 TRIM37O94972 964 aa23.25■■□□□ 1.31
RBFOX1-207ENST00000547338 MARCH10Q8NA82 808 aaPredicted RBP23.25■■□□□ 1.31
RBFOX1-207ENST00000547338 AMPHP49418 695 aa23.24■■□□□ 1.31
RBFOX1-207ENST00000547338 LTV1Q96GA3 475 aaPredicted RBP23.24■■□□□ 1.31
RBFOX1-207ENST00000547338 OVOS2A0A0G2JMS6 1433 aa23.24■■□□□ 1.31
RBFOX1-207ENST00000547338 TNS2Q63HR2 1409 aa23.24■■□□□ 1.31
RBFOX1-207ENST00000547338 SF3B2Q13435 895 aaKnown RBP23.23■■□□□ 1.31
RBFOX1-207ENST00000547338 EMILIN1Q9Y6C2 1016 aa23.23■■□□□ 1.31
RBFOX1-207ENST00000547338 BCL9O00512 1426 aa23.21■■□□□ 1.31
RBFOX1-207ENST00000547338 HSP90AB2PQ58FF8 381 aa23.21■■□□□ 1.31
RBFOX1-207ENST00000547338 INSRP06213 1382 aa23.2■■□□□ 1.31
RBFOX1-207ENST00000547338 FLT4P35916 1363 aa23.2■■□□□ 1.31
RBFOX1-207ENST00000547338 KIF24Q5T7B8 1368 aa23.2■■□□□ 1.31
RBFOX1-207ENST00000547338 EN1Q05925 392 aaPredicted RBP23.2■■□□□ 1.3
RBFOX1-207ENST00000547338 MAP2P11137 1827 aaKnown RBP23.19■■□□□ 1.3
RBFOX1-207ENST00000547338 IL2RBP14784 551 aa23.19■■□□□ 1.3
RBFOX1-207ENST00000547338 BAG6P46379 1132 aa23.19■■□□□ 1.3
RBFOX1-207ENST00000547338 PTF1AQ7RTS3 328 aa23.19■■□□□ 1.3
RBFOX1-207ENST00000547338 SUPT16HQ9Y5B9 1047 aaKnown RBP23.18■■□□□ 1.3
RBFOX1-207ENST00000547338 RALBP1Q15311 655 aa23.18■■□□□ 1.3
RBFOX1-207ENST00000547338 NBPF6Q5VWK0 638 aa23.18■■□□□ 1.3
RBFOX1-207ENST00000547338 NBPF4Q96M43 638 aa23.18■■□□□ 1.3
RBFOX1-207ENST00000547338 CAMKK2Q96RR4 588 aa23.18■■□□□ 1.3
RBFOX1-207ENST00000547338 MRS2Q9HD23 443 aa23.18■■□□□ 1.3
RBFOX1-207ENST00000547338 MEGF6O75095 1541 aa23.17■■□□□ 1.3
RBFOX1-207ENST00000547338 EXOC5O00471 708 aa23.17■■□□□ 1.3
RBFOX1-207ENST00000547338 SHANK3Q9BYB0 1731 aa23.17■■□□□ 1.3
RBFOX1-207ENST00000547338 POLKQ9UBT6 870 aa23.16■■□□□ 1.3
RBFOX1-207ENST00000547338 RREB1Q92766 1687 aa23.15■■□□□ 1.3
RBFOX1-207ENST00000547338 HNRNPUQ00839 825 aaKnown RBP eCLIP23.15■■□□□ 1.3
RBFOX1-207ENST00000547338 EZH2Q15910 746 aaKnown RBP23.15■■□□□ 1.3
RBFOX1-207ENST00000547338 SRCAPQ6ZRS2 3230 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms