RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ZNF445P59923 1031 aa13.28□□□□□ -0.28
NPAS3-205ENST00000547068 PHF23Q9BUL5 403 aaPredicted RBP13.28□□□□□ -0.28
NPAS3-205ENST00000547068 C14orf93Q9H972 538 aaKnown RBP13.28□□□□□ -0.28
NPAS3-205ENST00000547068 ARHGAP23Q9P227 1491 aa13.27□□□□□ -0.28
NPAS3-205ENST00000547068 NRXN1Q9ULB1 1477 aa13.27□□□□□ -0.28
NPAS3-205ENST00000547068 BAG4O95429 457 aaKnown RBP13.27□□□□□ -0.29
NPAS3-205ENST00000547068 CLEC17AQ6ZS10 378 aa13.27□□□□□ -0.29
NPAS3-205ENST00000547068 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.29
NPAS3-205ENST00000547068 CSPP1Q1MSJ5 1256 aa13.27□□□□□ -0.29
NPAS3-205ENST00000547068 ITPRIPQ8IWB1 547 aa13.27□□□□□ -0.29
NPAS3-205ENST00000547068 KIF2CQ99661 725 aa13.27□□□□□ -0.29
NPAS3-205ENST00000547068 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.29
NPAS3-205ENST00000547068 DDX19BQ9UMR2 479 aa13.27□□□□□ -0.29
NPAS3-205ENST00000547068 NCLP19338 710 aaKnown RBP13.26□□□□□ -0.29
NPAS3-205ENST00000547068 PDLIM2Q96JY6 352 aa13.26□□□□□ -0.29
NPAS3-205ENST00000547068 CAVIN1Q6NZI2 390 aaKnown RBP13.25□□□□□ -0.29
NPAS3-205ENST00000547068 IQSEC2Q5JU85 1478 aa13.25□□□□□ -0.29
NPAS3-205ENST00000547068 CCDC27Q2M243 656 aa13.24□□□□□ -0.29
NPAS3-205ENST00000547068 ZSCAN23Q3MJ62 389 aa13.24□□□□□ -0.29
NPAS3-205ENST00000547068 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
NPAS3-205ENST00000547068 ZKSCAN5Q9Y2L8 839 aa13.24□□□□□ -0.29
NPAS3-205ENST00000547068 KIAA1210Q9ULL0 1709 aa13.24□□□□□ -0.29
NPAS3-205ENST00000547068 PLEKHG1Q9ULL1 1385 aa13.24□□□□□ -0.29
NPAS3-205ENST00000547068 TRIM27P14373 513 aa13.24□□□□□ -0.29
NPAS3-205ENST00000547068 RBSNQ9H1K0 784 aa13.24□□□□□ -0.29
NPAS3-205ENST00000547068 PRDM10Q9NQV6 1147 aa13.24□□□□□ -0.29
NPAS3-205ENST00000547068 SMC4Q9NTJ3 1288 aa13.24□□□□□ -0.29
NPAS3-205ENST00000547068 MCTP1Q6DN14 999 aa13.23□□□□□ -0.29
NPAS3-205ENST00000547068 LNPKQ9C0E8 428 aa13.23□□□□□ -0.29
NPAS3-205ENST00000547068 SHPRHQ149N8 1683 aa13.23□□□□□ -0.29
NPAS3-205ENST00000547068 TNNT2P45379 298 aaPredicted RBP13.23□□□□□ -0.29
NPAS3-205ENST00000547068 NUCB1Q02818 461 aa13.23□□□□□ -0.29
NPAS3-205ENST00000547068 SASS6Q6UVJ0 657 aa13.23□□□□□ -0.29
NPAS3-205ENST00000547068 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
NPAS3-205ENST00000547068 ZHX1Q9UKY1 873 aaPredicted RBP13.23□□□□□ -0.29
NPAS3-205ENST00000547068 MCM5P33992 734 aa13.22□□□□□ -0.29
NPAS3-205ENST00000547068 HSPA2P54652 639 aa13.22□□□□□ -0.29
NPAS3-205ENST00000547068 TMEM132EQ6IEE7 984 aa13.22□□□□□ -0.29
NPAS3-205ENST00000547068 MORC1Q86VD1 984 aa13.22□□□□□ -0.29
NPAS3-205ENST00000547068 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
NPAS3-205ENST00000547068 PRIM1P49642 420 aaKnown RBP13.21□□□□□ -0.29
NPAS3-205ENST00000547068 BMP2KLQ5H9B9 411 aa13.21□□□□□ -0.29
NPAS3-205ENST00000547068 AK9Q5TCS8 1911 aa13.21□□□□□ -0.29
NPAS3-205ENST00000547068 SLC24A1O60721 1099 aa13.21□□□□□ -0.29
NPAS3-205ENST00000547068 ATF7IPQ6VMQ6 1270 aa13.21□□□□□ -0.29
NPAS3-205ENST00000547068 CHD1LQ86WJ1 897 aa13.21□□□□□ -0.29
NPAS3-205ENST00000547068 CCDC94Q9BW85 323 aaPredicted RBP13.21□□□□□ -0.29
NPAS3-205ENST00000547068 ALKQ9UM73 1620 aa13.21□□□□□ -0.29
NPAS3-205ENST00000547068 LMTK3Q96Q04 1460 aa13.21□□□□□ -0.3
NPAS3-205ENST00000547068 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.3
NPAS3-205ENST00000547068 SLC26A8Q96RN1 970 aa13.2□□□□□ -0.3
NPAS3-205ENST00000547068 LMBRD1Q9NUN5 540 aa13.2□□□□□ -0.3
NPAS3-205ENST00000547068 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
NPAS3-205ENST00000547068 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
NPAS3-205ENST00000547068 DMTNQ08495 405 aa13.19□□□□□ -0.3
NPAS3-205ENST00000547068 UTP14CQ5TAP6 766 aaKnown RBP13.19□□□□□ -0.3
NPAS3-205ENST00000547068 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
NPAS3-205ENST00000547068 TSR2Q969E8 191 aaKnown RBP13.19□□□□□ -0.3
NPAS3-205ENST00000547068 ZBTB40Q9NUA8 1239 aa13.19□□□□□ -0.3
NPAS3-205ENST00000547068 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
NPAS3-205ENST00000547068 NUCB2P80303 420 aa13.19□□□□□ -0.3
NPAS3-205ENST00000547068 KIF16BQ96L93 1317 aa13.19□□□□□ -0.3
NPAS3-205ENST00000547068 TMEM57Q8N5G2 664 aa13.18□□□□□ -0.3
NPAS3-205ENST00000547068 SSH1Q8WYL5 1049 aa13.18□□□□□ -0.3
NPAS3-205ENST00000547068 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
NPAS3-205ENST00000547068 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
NPAS3-205ENST00000547068 TBC1D9Q6ZT07 1266 aa13.18□□□□□ -0.3
NPAS3-205ENST00000547068 STK26Q9P289 416 aa13.18□□□□□ -0.3
NPAS3-205ENST00000547068 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
NPAS3-205ENST00000547068 NPHP4O75161 1426 aaPredicted RBP13.17□□□□□ -0.3
NPAS3-205ENST00000547068 ADAMTS13Q76LX8 1427 aa13.17□□□□□ -0.3
NPAS3-205ENST00000547068 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
NPAS3-205ENST00000547068 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
NPAS3-205ENST00000547068 MED14O60244 1454 aa13.16□□□□□ -0.3
NPAS3-205ENST00000547068 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
NPAS3-205ENST00000547068 ZSCAN20P17040 1043 aaPredicted RBP13.16□□□□□ -0.3
NPAS3-205ENST00000547068 MTHFSP49914 203 aa13.16□□□□□ -0.3
NPAS3-205ENST00000547068 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
NPAS3-205ENST00000547068 ANKRD45Q5TZF3 282 aa13.16□□□□□ -0.3
NPAS3-205ENST00000547068 RBM27Q9P2N5 1060 aaKnown RBP13.16□□□□□ -0.3
NPAS3-205ENST00000547068 METP08581 1390 aa13.15□□□□□ -0.3
NPAS3-205ENST00000547068 NSD3Q9BZ95 1437 aa13.15□□□□□ -0.3
NPAS3-205ENST00000547068 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
NPAS3-205ENST00000547068 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
NPAS3-205ENST00000547068 CYP2E1P05181 493 aaPredicted RBP13.15□□□□□ -0.3
NPAS3-205ENST00000547068 FGD1P98174 961 aa13.15□□□□□ -0.3
NPAS3-205ENST00000547068 LRSAM1Q6UWE0 723 aa13.15□□□□□ -0.3
NPAS3-205ENST00000547068 YTHDC2Q9H6S0 1430 aaKnown RBP13.15□□□□□ -0.3
NPAS3-205ENST00000547068 U2AF1L5P0DN76 240 aaPredicted RBP13.14□□□□□ -0.31
NPAS3-205ENST00000547068 U2AF1Q01081 240 aaKnown RBP eCLIP13.14□□□□□ -0.31
NPAS3-205ENST00000547068 DNTTIP2Q5QJE6 756 aaKnown RBP13.14□□□□□ -0.31
NPAS3-205ENST00000547068 GPT2Q8TD30 523 aa13.14□□□□□ -0.31
NPAS3-205ENST00000547068 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
NPAS3-205ENST00000547068 KIAA2012Q0VF49 1180 aa13.14□□□□□ -0.31
NPAS3-205ENST00000547068 MYRIPQ8NFW9 859 aa13.14□□□□□ -0.31
NPAS3-205ENST00000547068 SYCE3A1L190 88 aa13.13□□□□□ -0.31
NPAS3-205ENST00000547068 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
NPAS3-205ENST00000547068 PKP1Q13835 747 aa13.13□□□□□ -0.31
NPAS3-205ENST00000547068 RABEP1Q15276 862 aa13.13□□□□□ -0.31
NPAS3-205ENST00000547068 SETD1AO15047 1707 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms