RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZC3H6P61129 1189 aaKnown RBP21.14■□□□□ 0.97
TRAFD1-203ENST00000547063 FAM9BQ8IZU0 186 aa21.13■□□□□ 0.97
TRAFD1-203ENST00000547063 ZBTB7CA1YPR0 619 aa21.12■□□□□ 0.97
TRAFD1-203ENST00000547063 PRDM11Q9NQV5 511 aa21.12■□□□□ 0.97
TRAFD1-203ENST00000547063 KIAA0232Q92628 1395 aa21.11■□□□□ 0.97
TRAFD1-203ENST00000547063 HSPA1LP34931 641 aa21.11■□□□□ 0.97
TRAFD1-203ENST00000547063 HSP90AB2PQ58FF8 381 aa21.11■□□□□ 0.97
TRAFD1-203ENST00000547063 SPATA31A6Q5VVP1 1343 aa21.1■□□□□ 0.97
TRAFD1-203ENST00000547063 IL13P35225 146 aa21.09■□□□□ 0.97
TRAFD1-203ENST00000547063 U2SURPO15042 1029 aaKnown RBP21.08■□□□□ 0.97
TRAFD1-203ENST00000547063 EIF4A2Q14240 407 aaKnown RBP21.08■□□□□ 0.97
TRAFD1-203ENST00000547063 PNNQ9H307 717 aaKnown RBP21.08■□□□□ 0.97
TRAFD1-203ENST00000547063 U2AF1L5P0DN76 240 aaPredicted RBP21.07■□□□□ 0.96
TRAFD1-203ENST00000547063 U2AF1Q01081 240 aaKnown RBP eCLIP21.07■□□□□ 0.96
TRAFD1-203ENST00000547063 COL18A1P39060 1754 aa21.07■□□□□ 0.96
TRAFD1-203ENST00000547063 ADAMTS8Q9UP79 889 aa21.06■□□□□ 0.96
TRAFD1-203ENST00000547063 COL14A1Q05707 1796 aaKnown RBP21.05■□□□□ 0.96
TRAFD1-203ENST00000547063 FBXO41Q8TF61 875 aa21.05■□□□□ 0.96
TRAFD1-203ENST00000547063 CHRNA2Q15822 529 aa21.04■□□□□ 0.96
TRAFD1-203ENST00000547063 LMO7Q8WWI1 1683 aa21.03■□□□□ 0.96
TRAFD1-203ENST00000547063 FCHSD2O94868 740 aa21.03■□□□□ 0.96
TRAFD1-203ENST00000547063 ANKRD24Q8TF21 1146 aa21.03■□□□□ 0.96
TRAFD1-203ENST00000547063 ERBB3P21860 1342 aa21.03■□□□□ 0.96
TRAFD1-203ENST00000547063 FAM208AQ9UK61 1670 aaKnown RBP21.02■□□□□ 0.96
TRAFD1-203ENST00000547063 NUTM2BA6NNL0 878 aaPredicted RBP21.02■□□□□ 0.96
TRAFD1-203ENST00000547063 NUTM2EB1AL46 878 aaPredicted RBP21.02■□□□□ 0.96
TRAFD1-203ENST00000547063 NUTM2AQ8IVF1 878 aaPredicted RBP21.02■□□□□ 0.96
TRAFD1-203ENST00000547063 LTV1Q96GA3 475 aaPredicted RBP21.02■□□□□ 0.96
TRAFD1-203ENST00000547063 AXIN2Q9Y2T1 843 aa21.02■□□□□ 0.96
TRAFD1-203ENST00000547063 RGPD5Q99666 1765 aa21.02■□□□□ 0.96
TRAFD1-203ENST00000547063 RGPD1P0DJD0 1748 aa21.01■□□□□ 0.95
TRAFD1-203ENST00000547063 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
TRAFD1-203ENST00000547063 NEFMP07197 916 aa21.01■□□□□ 0.95
TRAFD1-203ENST00000547063 IGSF1Q8N6C5 1336 aa21.01■□□□□ 0.95
TRAFD1-203ENST00000547063 ADAMTS2O95450 1211 aa20.99■□□□□ 0.95
TRAFD1-203ENST00000547063 CSB-PGBD3P0DP91 1061 aa20.99■□□□□ 0.95
TRAFD1-203ENST00000547063 RUNDC1Q96C34 613 aa20.99■□□□□ 0.95
TRAFD1-203ENST00000547063 EYA1Q99502 592 aa20.99■□□□□ 0.95
TRAFD1-203ENST00000547063 CAMTA1Q9Y6Y1 1673 aa20.99■□□□□ 0.95
TRAFD1-203ENST00000547063 COL5A2P05997 1499 aaPredicted RBP20.97■□□□□ 0.95
TRAFD1-203ENST00000547063 EVA1CP58658 441 aa20.97■□□□□ 0.95
TRAFD1-203ENST00000547063 MAPK8IP3Q9UPT6 1336 aa20.97■□□□□ 0.95
TRAFD1-203ENST00000547063 KDRP35968 1356 aa20.97■□□□□ 0.95
TRAFD1-203ENST00000547063 SULT6B1Q6IMI4 303 aa20.96■□□□□ 0.95
TRAFD1-203ENST00000547063 NGEFQ8N5V2 710 aa20.96■□□□□ 0.95
TRAFD1-203ENST00000547063 BTG4Q9NY30 223 aa20.96■□□□□ 0.95
TRAFD1-203ENST00000547063 WDR17Q8IZU2 1322 aa20.96■□□□□ 0.95
TRAFD1-203ENST00000547063 NWD2Q9ULI1 1742 aa20.95■□□□□ 0.94
TRAFD1-203ENST00000547063 HMOX1P09601 288 aa20.95■□□□□ 0.94
TRAFD1-203ENST00000547063 RSPH6AQ9H0K4 717 aa20.95■□□□□ 0.94
TRAFD1-203ENST00000547063 NLRP2Q9NX02 1062 aa20.95■□□□□ 0.94
TRAFD1-203ENST00000547063 PLCH1Q4KWH8 1693 aa20.95■□□□□ 0.94
TRAFD1-203ENST00000547063 PRKAR2BP31323 418 aa20.94■□□□□ 0.94
TRAFD1-203ENST00000547063 HNRNPUQ00839 825 aaKnown RBP eCLIP20.94■□□□□ 0.94
TRAFD1-203ENST00000547063 NBPF6Q5VWK0 638 aa20.94■□□□□ 0.94
TRAFD1-203ENST00000547063 NBPF4Q96M43 638 aa20.94■□□□□ 0.94
TRAFD1-203ENST00000547063 NCAPD2Q15021 1401 aa20.94■□□□□ 0.94
TRAFD1-203ENST00000547063 MEX3CQ5U5Q3 659 aaKnown RBP20.93■□□□□ 0.94
TRAFD1-203ENST00000547063 YTHDC1Q96MU7 727 aaKnown RBP20.93■□□□□ 0.94
TRAFD1-203ENST00000547063 TOM1L2Q6ZVM7 507 aa20.92■□□□□ 0.94
TRAFD1-203ENST00000547063 CCDC146Q8IYE0 955 aa20.92■□□□□ 0.94
TRAFD1-203ENST00000547063 PLEKHF1Q96S99 279 aa20.92■□□□□ 0.94
TRAFD1-203ENST00000547063 PLEKHG2Q9H7P9 1386 aa20.92■□□□□ 0.94
TRAFD1-203ENST00000547063 RGPD2P0DJD1 1756 aa20.92■□□□□ 0.94
TRAFD1-203ENST00000547063 LRP6O75581 1613 aa20.91■□□□□ 0.94
TRAFD1-203ENST00000547063 SLIT2O94813 1529 aa20.91■□□□□ 0.94
TRAFD1-203ENST00000547063 NGLY1Q96IV0 654 aa20.91■□□□□ 0.94
TRAFD1-203ENST00000547063 STRN4Q9NRL3 753 aa20.91■□□□□ 0.94
TRAFD1-203ENST00000547063 CRB1P82279 1406 aa20.9■□□□□ 0.94
TRAFD1-203ENST00000547063 NCBP3Q53F19 620 aaKnown RBP20.9■□□□□ 0.94
TRAFD1-203ENST00000547063 AEBP1Q8IUX7 1158 aa20.9■□□□□ 0.94
TRAFD1-203ENST00000547063 CARD10Q9BWT7 1032 aa20.9■□□□□ 0.94
TRAFD1-203ENST00000547063 C8orf37Q96NL8 207 aa20.89■□□□□ 0.93
TRAFD1-203ENST00000547063 APAF1O14727 1248 aa20.88■□□□□ 0.93
TRAFD1-203ENST00000547063 TCP11L2Q8N4U5 519 aa20.88■□□□□ 0.93
TRAFD1-203ENST00000547063 NRAPQ86VF7 1730 aa20.87■□□□□ 0.93
TRAFD1-203ENST00000547063 LARP1Q6PKG0 1096 aaKnown RBP20.87■□□□□ 0.93
TRAFD1-203ENST00000547063 FNBP4Q8N3X1 1017 aaPredicted RBP20.87■□□□□ 0.93
TRAFD1-203ENST00000547063 USHBP1Q8N6Y0 703 aa20.87■□□□□ 0.93
TRAFD1-203ENST00000547063 RAPGEF4Q8WZA2 1011 aa20.87■□□□□ 0.93
TRAFD1-203ENST00000547063 UNC5CLQ8IV45 518 aa20.86■□□□□ 0.93
TRAFD1-203ENST00000547063 ZBED9Q6R2W3 1325 aa20.85■□□□□ 0.93
TRAFD1-203ENST00000547063 AMOTQ4VCS5 1084 aa20.85■□□□□ 0.93
TRAFD1-203ENST00000547063 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.84■□□□□ 0.93
TRAFD1-203ENST00000547063 TATP17735 454 aaPredicted RBP20.84■□□□□ 0.93
TRAFD1-203ENST00000547063 NFE2L2Q16236 605 aa20.84■□□□□ 0.93
TRAFD1-203ENST00000547063 GAS2L2Q8NHY3 880 aa20.84■□□□□ 0.93
TRAFD1-203ENST00000547063 TMPOP42166 694 aaKnown RBP20.83■□□□□ 0.93
TRAFD1-203ENST00000547063 LMOD3Q0VAK6 560 aa20.83■□□□□ 0.93
TRAFD1-203ENST00000547063 PLEKHO1Q53GL0 409 aaPredicted RBP20.83■□□□□ 0.93
TRAFD1-203ENST00000547063 PHACTR3Q96KR7 559 aa20.83■□□□□ 0.93
TRAFD1-203ENST00000547063 THRAP3Q9Y2W1 955 aaKnown RBP20.83■□□□□ 0.93
TRAFD1-203ENST00000547063 CCDC27Q2M243 656 aa20.82■□□□□ 0.92
TRAFD1-203ENST00000547063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.82■□□□□ 0.924e-6■□□□□ 11.2
TRAFD1-203ENST00000547063 USP21Q9UK80 565 aa20.82■□□□□ 0.92
TRAFD1-203ENST00000547063 BCL9LQ86UU0 1499 aa20.81■□□□□ 0.92
TRAFD1-203ENST00000547063 PARP4Q9UKK3 1724 aaKnown RBP20.81■□□□□ 0.92
TRAFD1-203ENST00000547063 IL2RBP14784 551 aa20.8■□□□□ 0.92
TRAFD1-203ENST00000547063 RIPK4P57078 832 aa20.8■□□□□ 0.92
TRAFD1-203ENST00000547063 VPS72Q15906 364 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms