RNA–Protein interactions for RNA: ENST00000546884.1

ERBB3-205, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-205ENST00000546884 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
ERBB3-205ENST00000546884 NSD2O96028 1365 aa20.3■□□□□ 0.84
ERBB3-205ENST00000546884 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
ERBB3-205ENST00000546884 ILDR2Q71H61 639 aa20.29■□□□□ 0.84
ERBB3-205ENST00000546884 TRPC5Q9UL62 973 aaPredicted RBP20.29■□□□□ 0.84
ERBB3-205ENST00000546884 COL5A2P05997 1499 aaPredicted RBP20.29■□□□□ 0.84
ERBB3-205ENST00000546884 GLI3P10071 1580 aa20.29■□□□□ 0.84
ERBB3-205ENST00000546884 VPS72Q15906 364 aa20.28■□□□□ 0.84
ERBB3-205ENST00000546884 NPC1L1Q9UHC9 1359 aa20.27■□□□□ 0.84
ERBB3-205ENST00000546884 CC2D1BQ5T0F9 858 aaKnown RBP20.27■□□□□ 0.84
ERBB3-205ENST00000546884 IP6K1Q92551 441 aa20.27■□□□□ 0.84
ERBB3-205ENST00000546884 STRN4Q9NRL3 753 aa20.27■□□□□ 0.84
ERBB3-205ENST00000546884 TNNT2P45379 298 aaPredicted RBP20.26■□□□□ 0.83
ERBB3-205ENST00000546884 LARP1Q6PKG0 1096 aaKnown RBP20.26■□□□□ 0.83
ERBB3-205ENST00000546884 GJD4Q96KN9 370 aaPredicted RBP20.26■□□□□ 0.83
ERBB3-205ENST00000546884 POLKQ9UBT6 870 aa20.26■□□□□ 0.83
ERBB3-205ENST00000546884 EMILIN1Q9Y6C2 1016 aa20.26■□□□□ 0.83
ERBB3-205ENST00000546884 ABCC6O95255 1503 aa20.26■□□□□ 0.83
ERBB3-205ENST00000546884 HOXC9P31274 260 aa20.25■□□□□ 0.83
ERBB3-205ENST00000546884 MORC1Q86VD1 984 aa20.25■□□□□ 0.83
ERBB3-205ENST00000546884 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
ERBB3-205ENST00000546884 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
ERBB3-205ENST00000546884 RXRBP28702 533 aa20.23■□□□□ 0.83
ERBB3-205ENST00000546884 RBM6P78332 1123 aaKnown RBP20.23■□□□□ 0.83
ERBB3-205ENST00000546884 CNGB1Q14028 1251 aaPredicted RBP20.23■□□□□ 0.83
ERBB3-205ENST00000546884 EVA1CP58658 441 aa20.22■□□□□ 0.83
ERBB3-205ENST00000546884 HSP90AB2PQ58FF8 381 aa20.22■□□□□ 0.83
ERBB3-205ENST00000546884 SPATA31A1Q5TZJ5 1347 aa20.22■□□□□ 0.83
ERBB3-205ENST00000546884 AMPHP49418 695 aa20.21■□□□□ 0.83
ERBB3-205ENST00000546884 ERBB3P21860 1342 aa20.21■□□□□ 0.83
ERBB3-205ENST00000546884 RGPD2P0DJD1 1756 aa20.21■□□□□ 0.83
ERBB3-205ENST00000546884 BLMP54132 1417 aaPredicted RBP20.2■□□□□ 0.82
ERBB3-205ENST00000546884 ONECUT3O60422 494 aaPredicted RBP20.2■□□□□ 0.82
ERBB3-205ENST00000546884 ANKRD24Q8TF21 1146 aa20.2■□□□□ 0.82
ERBB3-205ENST00000546884 WDR17Q8IZU2 1322 aa20.2■□□□□ 0.82
ERBB3-205ENST00000546884 RTL1A6NKG5 1358 aa20.2■□□□□ 0.82
ERBB3-205ENST00000546884 SMG6Q86US8 1419 aaKnown RBP20.19■□□□□ 0.82
ERBB3-205ENST00000546884 KIF24Q5T7B8 1368 aa20.19■□□□□ 0.82
ERBB3-205ENST00000546884 CRB1P82279 1406 aa20.19■□□□□ 0.82
ERBB3-205ENST00000546884 CCDC9Q9Y3X0 531 aaKnown RBP20.18■□□□□ 0.82
ERBB3-205ENST00000546884 FLT4P35916 1363 aa20.18■□□□□ 0.82
ERBB3-205ENST00000546884 RGS12O14924 1447 aa20.18■□□□□ 0.82
ERBB3-205ENST00000546884 LTV1Q96GA3 475 aaPredicted RBP20.17■□□□□ 0.82
ERBB3-205ENST00000546884 INSRP06213 1382 aa20.17■□□□□ 0.82
ERBB3-205ENST00000546884 PPM1GO15355 546 aaPredicted RBP20.16■□□□□ 0.82
ERBB3-205ENST00000546884 USP35Q9P2H5 1018 aa20.16■□□□□ 0.82
ERBB3-205ENST00000546884 CDK12Q9NYV4 1490 aaPredicted RBP20.16■□□□□ 0.82
ERBB3-205ENST00000546884 FAM98CQ17RN3 349 aaKnown RBP20.15■□□□□ 0.82
ERBB3-205ENST00000546884 TOM1L2Q6ZVM7 507 aa20.15■□□□□ 0.82
ERBB3-205ENST00000546884 CARD10Q9BWT7 1032 aa20.15■□□□□ 0.82
ERBB3-205ENST00000546884 BRWD3Q6RI45 1802 aa20.14■□□□□ 0.81
ERBB3-205ENST00000546884 THSD7AQ9UPZ6 1657 aa20.14■□□□□ 0.81
ERBB3-205ENST00000546884 PARD3Q8TEW0 1356 aa20.13■□□□□ 0.81
ERBB3-205ENST00000546884 CSB-PGBD3P0DP91 1061 aa20.13■□□□□ 0.81
ERBB3-205ENST00000546884 MTHFSP49914 203 aa20.13■□□□□ 0.81
ERBB3-205ENST00000546884 NBPF6Q5VWK0 638 aa20.13■□□□□ 0.81
ERBB3-205ENST00000546884 NBPF4Q96M43 638 aa20.13■□□□□ 0.81
ERBB3-205ENST00000546884 FAM208AQ9UK61 1670 aaKnown RBP20.13■□□□□ 0.81
ERBB3-205ENST00000546884 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
ERBB3-205ENST00000546884 TCP11L2Q8N4U5 519 aa20.12■□□□□ 0.81
ERBB3-205ENST00000546884 WNK3Q9BYP7 1800 aa20.11■□□□□ 0.81
ERBB3-205ENST00000546884 PPP2R1AP30153 589 aa20.11■□□□□ 0.81
ERBB3-205ENST00000546884 EIF4A2Q14240 407 aaKnown RBP20.11■□□□□ 0.81
ERBB3-205ENST00000546884 SEPT12Q8IYM1 358 aa20.11■□□□□ 0.81
ERBB3-205ENST00000546884 NLRP2Q9NX02 1062 aa20.11■□□□□ 0.81
ERBB3-205ENST00000546884 THRAP3Q9Y2W1 955 aaKnown RBP20.11■□□□□ 0.81
ERBB3-205ENST00000546884 EP400Q96L91 3159 aa20.11■□□□□ 0.81
ERBB3-205ENST00000546884 DISP2A7MBM2 1401 aa20.1■□□□□ 0.81
ERBB3-205ENST00000546884 COL3A1P02461 1466 aaPredicted RBP20.08■□□□□ 0.81
ERBB3-205ENST00000546884 USHBP1Q8N6Y0 703 aa20.08■□□□□ 0.81
ERBB3-205ENST00000546884 PARP4Q9UKK3 1724 aaKnown RBP20.07■□□□□ 0.8
ERBB3-205ENST00000546884 EYA1Q99502 592 aa20.07■□□□□ 0.8
ERBB3-205ENST00000546884 NCAPD2Q15021 1401 aa20.07■□□□□ 0.8
ERBB3-205ENST00000546884 IL13P35225 146 aa20.06■□□□□ 0.8
ERBB3-205ENST00000546884 RGPD1P0DJD0 1748 aa20.05■□□□□ 0.8
ERBB3-205ENST00000546884 LRRC37A3O60309 1634 aa20.04■□□□□ 0.8
ERBB3-205ENST00000546884 RALBP1Q15311 655 aa20.03■□□□□ 0.8
ERBB3-205ENST00000546884 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
ERBB3-205ENST00000546884 MEGF6O75095 1541 aa20.02■□□□□ 0.8
ERBB3-205ENST00000546884 IGSF1Q8N6C5 1336 aa20.02■□□□□ 0.79
ERBB3-205ENST00000546884 IL2RBP14784 551 aa20.01■□□□□ 0.79
ERBB3-205ENST00000546884 FAM182BQ5T319 152 aa20.01■□□□□ 0.79
ERBB3-205ENST00000546884 A0A0G2JS52 829 aa20■□□□□ 0.79
ERBB3-205ENST00000546884 MYT1Q01538 1121 aa20■□□□□ 0.79
ERBB3-205ENST00000546884 KRT27Q7Z3Y8 459 aa20■□□□□ 0.79
ERBB3-205ENST00000546884 SHANK3Q9BYB0 1731 aa19.99■□□□□ 0.79
ERBB3-205ENST00000546884 AEBP1Q8IUX7 1158 aa19.99■□□□□ 0.79
ERBB3-205ENST00000546884 CDCA7Q9BWT1 371 aaPredicted RBP19.99■□□□□ 0.79
ERBB3-205ENST00000546884 DIAPH1O60610 1272 aaKnown RBP19.98■□□□□ 0.79
ERBB3-205ENST00000546884 DDB1Q16531 1140 aa19.97■□□□□ 0.79
ERBB3-205ENST00000546884 MARCH10Q8NA82 808 aaPredicted RBP19.97■□□□□ 0.79
ERBB3-205ENST00000546884 OVOS2A0A0G2JMS6 1433 aa19.96■□□□□ 0.79
ERBB3-205ENST00000546884 EXOC5O00471 708 aa19.95■□□□□ 0.78
ERBB3-205ENST00000546884 MYBBP1AQ9BQG0 1328 aaKnown RBP19.95■□□□□ 0.78
ERBB3-205ENST00000546884 KDRP35968 1356 aa19.95■□□□□ 0.78
ERBB3-205ENST00000546884 TNS2Q63HR2 1409 aa19.94■□□□□ 0.78
ERBB3-205ENST00000546884 SULT6B1Q6IMI4 303 aa19.94■□□□□ 0.78
ERBB3-205ENST00000546884 PDE3BQ13370 1112 aa19.93■□□□□ 0.78
ERBB3-205ENST00000546884 PKD1L3Q7Z443 1732 aa19.93■□□□□ 0.78
ERBB3-205ENST00000546884 RAPGEF4Q8WZA2 1011 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms