RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 WDR17Q8IZU2 1322 aa16.38■□□□□ 0.21
RAB5C-203ENST00000546881 C11orf95C9JLR9 678 aaPredicted RBP16.37■□□□□ 0.21
RAB5C-203ENST00000546881 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
RAB5C-203ENST00000546881 COL18A1P39060 1754 aa16.36■□□□□ 0.21
RAB5C-203ENST00000546881 AKAP12Q02952 1782 aa16.36■□□□□ 0.21
RAB5C-203ENST00000546881 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
RAB5C-203ENST00000546881 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
RAB5C-203ENST00000546881 PEAK1Q9H792 1746 aa16.35■□□□□ 0.21
RAB5C-203ENST00000546881 RGPD5Q99666 1765 aa16.34■□□□□ 0.21
RAB5C-203ENST00000546881 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
RAB5C-203ENST00000546881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.34■□□□□ 0.21
RAB5C-203ENST00000546881 PPP1R1BQ9UD71 204 aaPredicted RBP16.34■□□□□ 0.21
RAB5C-203ENST00000546881 PTF1AQ7RTS3 328 aa16.33■□□□□ 0.2
RAB5C-203ENST00000546881 MARCH10Q8NA82 808 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-203ENST00000546881 CDCA7Q9BWT1 371 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-203ENST00000546881 SBF2Q86WG5 1849 aa16.32■□□□□ 0.2
RAB5C-203ENST00000546881 TMC1Q8TDI8 760 aa16.32■□□□□ 0.2
RAB5C-203ENST00000546881 CARD10Q9BWT7 1032 aa16.32■□□□□ 0.2
RAB5C-203ENST00000546881 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
RAB5C-203ENST00000546881 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
RAB5C-203ENST00000546881 SPON1Q9HCB6 807 aa16.31■□□□□ 0.2
RAB5C-203ENST00000546881 NFAT5O94916 1531 aa16.3■□□□□ 0.2
RAB5C-203ENST00000546881 EXOC5O00471 708 aa16.3■□□□□ 0.2
RAB5C-203ENST00000546881 PLSCR1O15162 318 aa16.3■□□□□ 0.2
RAB5C-203ENST00000546881 MON2Q7Z3U7 1717 aa16.3■□□□□ 0.2
RAB5C-203ENST00000546881 KCNQ2O43526 872 aa16.29■□□□□ 0.2
RAB5C-203ENST00000546881 NME9Q86XW9 330 aa16.29■□□□□ 0.2
RAB5C-203ENST00000546881 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
RAB5C-203ENST00000546881 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
RAB5C-203ENST00000546881 CCDC7Q96M83 1385 aa16.28■□□□□ 0.2
RAB5C-203ENST00000546881 HDGFL2Q7Z4V5 671 aaPredicted RBP16.28■□□□□ 0.2
RAB5C-203ENST00000546881 ANO8Q9HCE9 1232 aaPredicted RBP16.28■□□□□ 0.2
RAB5C-203ENST00000546881 NLRP2Q9NX02 1062 aa16.27■□□□□ 0.2
RAB5C-203ENST00000546881 TONSLQ96HA7 1378 aa16.26■□□□□ 0.19
RAB5C-203ENST00000546881 SBNO2Q9Y2G9 1366 aa16.26■□□□□ 0.19
RAB5C-203ENST00000546881 SLC12A5Q9H2X9 1139 aa16.26■□□□□ 0.19
RAB5C-203ENST00000546881 CD163L1Q9NR16 1453 aa16.25■□□□□ 0.19
RAB5C-203ENST00000546881 USP31Q70CQ4 1352 aa16.25■□□□□ 0.19
RAB5C-203ENST00000546881 ABCC6O95255 1503 aa16.24■□□□□ 0.19
RAB5C-203ENST00000546881 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
RAB5C-203ENST00000546881 PROM2Q8N271 834 aa16.24■□□□□ 0.19
RAB5C-203ENST00000546881 ACSBG1Q96GR2 724 aa16.24■□□□□ 0.19
RAB5C-203ENST00000546881 STK32BQ9NY57 414 aa16.24■□□□□ 0.19
RAB5C-203ENST00000546881 BCL9O00512 1426 aa16.24■□□□□ 0.19
RAB5C-203ENST00000546881 TNS2Q63HR2 1409 aa16.24■□□□□ 0.19
RAB5C-203ENST00000546881 LTN1O94822 1766 aa16.23■□□□□ 0.19
RAB5C-203ENST00000546881 ERBB3P21860 1342 aa16.23■□□□□ 0.19
RAB5C-203ENST00000546881 ZBTB7AO95365 584 aa16.23■□□□□ 0.19
RAB5C-203ENST00000546881 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
RAB5C-203ENST00000546881 ANKRD24Q8TF21 1146 aa16.23■□□□□ 0.19
RAB5C-203ENST00000546881 PDGFDQ9GZP0 370 aaPredicted RBP16.23■□□□□ 0.19
RAB5C-203ENST00000546881 TERF2IPQ9NYB0 399 aa16.23■□□□□ 0.19
RAB5C-203ENST00000546881 YY1P25490 414 aa16.22■□□□□ 0.19
RAB5C-203ENST00000546881 USP54Q70EL1 1684 aa16.21■□□□□ 0.19
RAB5C-203ENST00000546881 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
RAB5C-203ENST00000546881 CASZ1Q86V15 1759 aa16.21■□□□□ 0.19
RAB5C-203ENST00000546881 IL2RBP14784 551 aa16.21■□□□□ 0.19
RAB5C-203ENST00000546881 A0A1W2PP64 1363 aa16.21■□□□□ 0.19
RAB5C-203ENST00000546881 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.19
RAB5C-203ENST00000546881 LTV1Q96GA3 475 aaPredicted RBP16.2■□□□□ 0.18
RAB5C-203ENST00000546881 ATF5Q9Y2D1 282 aaPredicted RBP16.2■□□□□ 0.18
RAB5C-203ENST00000546881 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
RAB5C-203ENST00000546881 SLC15A2Q16348 729 aa16.19■□□□□ 0.18
RAB5C-203ENST00000546881 MYOM1P52179 1685 aa16.16■□□□□ 0.18
RAB5C-203ENST00000546881 ST20-MTHFSA0A0A6YYL1 179 aa16.16■□□□□ 0.18
RAB5C-203ENST00000546881 DDX54Q8TDD1 881 aaKnown RBP16.16■□□□□ 0.18
RAB5C-203ENST00000546881 TRIM26Q12899 539 aaPredicted RBP16.15■□□□□ 0.18
RAB5C-203ENST00000546881 IP6K1Q92551 441 aa16.15■□□□□ 0.18
RAB5C-203ENST00000546881 COG3Q96JB2 828 aa16.15■□□□□ 0.18
RAB5C-203ENST00000546881 PTGER2P43116 358 aa16.14■□□□□ 0.17
RAB5C-203ENST00000546881 PUS7Q96PZ0 661 aaKnown RBP16.14■□□□□ 0.17
RAB5C-203ENST00000546881 BTAF1O14981 1849 aa16.14■□□□□ 0.17
RAB5C-203ENST00000546881 AMPHP49418 695 aa16.13■□□□□ 0.17
RAB5C-203ENST00000546881 MTFR1LQ9H019 292 aa16.13■□□□□ 0.17
RAB5C-203ENST00000546881 FBLN1P23142 703 aa16.12■□□□□ 0.17
RAB5C-203ENST00000546881 SYTL4Q96C24 671 aaPredicted RBP16.12■□□□□ 0.17
RAB5C-203ENST00000546881 TESK2Q96S53 571 aa16.12■□□□□ 0.17
RAB5C-203ENST00000546881 MAP3K19Q56UN5 1328 aa16.12■□□□□ 0.17
RAB5C-203ENST00000546881 KAT6BQ8WYB5 2073 aa16.12■□□□□ 0.17
RAB5C-203ENST00000546881 FHDC1Q9C0D6 1143 aaPredicted RBP16.11■□□□□ 0.17
RAB5C-203ENST00000546881 FAM208AQ9UK61 1670 aaKnown RBP16.11■□□□□ 0.17
RAB5C-203ENST00000546881 HOXC9P31274 260 aa16.1■□□□□ 0.17
RAB5C-203ENST00000546881 ZNF827Q17R98 1081 aa16.1■□□□□ 0.17
RAB5C-203ENST00000546881 PAPPAQ13219 1627 aa16.09■□□□□ 0.17
RAB5C-203ENST00000546881 LRRC4BQ9NT99 713 aa16.09■□□□□ 0.17
RAB5C-203ENST00000546881 SLC24A1O60721 1099 aa16.08■□□□□ 0.16
RAB5C-203ENST00000546881 SYT17Q9BSW7 474 aa16.08■□□□□ 0.16
RAB5C-203ENST00000546881 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
RAB5C-203ENST00000546881 RRS1Q15050 365 aaKnown RBP16.07■□□□□ 0.16
RAB5C-203ENST00000546881 ARXQ96QS3 562 aa16.07■□□□□ 0.16
RAB5C-203ENST00000546881 GGNBP2Q9H3C7 697 aa16.07■□□□□ 0.16
RAB5C-203ENST00000546881 ANKRD36BQ8N2N9 1353 aa16.07■□□□□ 0.16
RAB5C-203ENST00000546881 RGPD2P0DJD1 1756 aa16.06■□□□□ 0.16
RAB5C-203ENST00000546881 KCNQ4P56696 695 aa16.06■□□□□ 0.16
RAB5C-203ENST00000546881 TMF1P82094 1093 aa16.06■□□□□ 0.16
RAB5C-203ENST00000546881 KLHL34Q8N239 644 aa16.06■□□□□ 0.16
RAB5C-203ENST00000546881 ZCRB1Q8TBF4 217 aaKnown RBP16.06■□□□□ 0.16
RAB5C-203ENST00000546881 SGIP1Q9BQI5 828 aa16.06■□□□□ 0.16
RAB5C-203ENST00000546881 DOT1LQ8TEK3 1739 aa16.05■□□□□ 0.16
RAB5C-203ENST00000546881 USP47Q96K76 1375 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms