RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 RGPD3A6NKT7 1758 aaPredicted RBP13.59□□□□□ -0.23
SSH1-205ENST00000546812 RGPD4Q7Z3J3 1758 aa13.59□□□□□ -0.23
SSH1-205ENST00000546812 TOM1L2Q6ZVM7 507 aa13.59□□□□□ -0.23
SSH1-205ENST00000546812 CDCA7Q9BWT1 371 aaPredicted RBP13.59□□□□□ -0.23
SSH1-205ENST00000546812 ARXQ96QS3 562 aa13.58□□□□□ -0.24
SSH1-205ENST00000546812 MYOM1P52179 1685 aa13.58□□□□□ -0.24
SSH1-205ENST00000546812 ZBTB7CA1YPR0 619 aa13.57□□□□□ -0.24
SSH1-205ENST00000546812 GIGYF1O75420 1035 aaPredicted RBP13.57□□□□□ -0.24
SSH1-205ENST00000546812 GOLGB1Q14789 3259 aaKnown RBP13.57□□□□□ -0.24
SSH1-205ENST00000546812 MAP3K5Q99683 1374 aa13.57□□□□□ -0.24
SSH1-205ENST00000546812 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
SSH1-205ENST00000546812 NLRP6P59044 892 aa13.55□□□□□ -0.24
SSH1-205ENST00000546812 GPR162Q16538 588 aa13.55□□□□□ -0.24
SSH1-205ENST00000546812 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
SSH1-205ENST00000546812 WDR17Q8IZU2 1322 aa13.55□□□□□ -0.24
SSH1-205ENST00000546812 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
SSH1-205ENST00000546812 EXOC5O00471 708 aa13.53□□□□□ -0.24
SSH1-205ENST00000546812 LRRC37A3O60309 1634 aa13.53□□□□□ -0.24
SSH1-205ENST00000546812 CARD10Q9BWT7 1032 aa13.52□□□□□ -0.25
SSH1-205ENST00000546812 SBF2Q86WG5 1849 aa13.52□□□□□ -0.25
SSH1-205ENST00000546812 PPIP5K1Q6PFW1 1433 aa13.51□□□□□ -0.25
SSH1-205ENST00000546812 SRPK2P78362 688 aaKnown RBP13.51□□□□□ -0.25
SSH1-205ENST00000546812 ARHGEF25Q86VW2 580 aa13.5□□□□□ -0.25
SSH1-205ENST00000546812 CHD4Q14839 1912 aa13.5□□□□□ -0.25
SSH1-205ENST00000546812 TOPAZ1Q8N9V7 1692 aa13.5□□□□□ -0.25
SSH1-205ENST00000546812 CSB-PGBD3P0DP91 1061 aa13.49□□□□□ -0.25
SSH1-205ENST00000546812 CABP2Q9NPB3 220 aa13.49□□□□□ -0.25
SSH1-205ENST00000546812 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
SSH1-205ENST00000546812 ARHGEF28Q8N1W1 1705 aaKnown RBP13.49□□□□□ -0.25
SSH1-205ENST00000546812 ZNF827Q17R98 1081 aa13.48□□□□□ -0.25
SSH1-205ENST00000546812 SLC16A10Q8TF71 515 aa13.48□□□□□ -0.25
SSH1-205ENST00000546812 SLIT3O75094 1523 aa13.48□□□□□ -0.25
SSH1-205ENST00000546812 USP6P35125 1406 aa13.47□□□□□ -0.25
SSH1-205ENST00000546812 KCNH5Q8NCM2 988 aa13.47□□□□□ -0.25
SSH1-205ENST00000546812 CPSF1Q10570 1443 aaKnown RBP13.47□□□□□ -0.25
SSH1-205ENST00000546812 POLD1P28340 1107 aa13.46□□□□□ -0.25
SSH1-205ENST00000546812 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.25
SSH1-205ENST00000546812 KLHL34Q8N239 644 aa13.46□□□□□ -0.25
SSH1-205ENST00000546812 ACSBG1Q96GR2 724 aa13.46□□□□□ -0.25
SSH1-205ENST00000546812 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
SSH1-205ENST00000546812 LRRC4BQ9NT99 713 aa13.45□□□□□ -0.26
SSH1-205ENST00000546812 CENPJQ9HC77 1338 aaPredicted RBP13.44□□□□□ -0.26
SSH1-205ENST00000546812 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
SSH1-205ENST00000546812 NBPF1Q3BBV0 1214 aa13.44□□□□□ -0.26
SSH1-205ENST00000546812 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
SSH1-205ENST00000546812 COL18A1P39060 1754 aa13.44□□□□□ -0.26
SSH1-205ENST00000546812 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
SSH1-205ENST00000546812 RAB3GAP2Q9H2M9 1393 aa13.44□□□□□ -0.26
SSH1-205ENST00000546812 SOX12O15370 315 aa13.43□□□□□ -0.26
SSH1-205ENST00000546812 NLGN2Q8NFZ4 835 aa13.43□□□□□ -0.26
SSH1-205ENST00000546812 TTC21BQ7Z4L5 1316 aa13.41□□□□□ -0.26
SSH1-205ENST00000546812 SLC27A3Q5K4L6 730 aa13.41□□□□□ -0.26
SSH1-205ENST00000546812 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
SSH1-205ENST00000546812 PAPPAQ13219 1627 aa13.41□□□□□ -0.26
SSH1-205ENST00000546812 PNPLA7Q6ZV29 1317 aa13.4□□□□□ -0.26
SSH1-205ENST00000546812 IL2RBP14784 551 aa13.4□□□□□ -0.26
SSH1-205ENST00000546812 YBX3P16989 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
SSH1-205ENST00000546812 TFCP2L1Q9NZI6 479 aa13.4□□□□□ -0.26
SSH1-205ENST00000546812 AKAP12Q02952 1782 aa13.4□□□□□ -0.26
SSH1-205ENST00000546812 HSPA6P17066 643 aa13.39□□□□□ -0.27
SSH1-205ENST00000546812 NLRP2Q9NX02 1062 aa13.39□□□□□ -0.27
SSH1-205ENST00000546812 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
SSH1-205ENST00000546812 SHANK3Q9BYB0 1731 aa13.39□□□□□ -0.27
SSH1-205ENST00000546812 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
SSH1-205ENST00000546812 NHSQ6T4R5 1651 aa13.38□□□□□ -0.27
SSH1-205ENST00000546812 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
SSH1-205ENST00000546812 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
SSH1-205ENST00000546812 GPBP1L1Q9HC44 474 aaPredicted RBP13.37□□□□□ -0.27
SSH1-205ENST00000546812 ABCC6O95255 1503 aa13.37□□□□□ -0.27
SSH1-205ENST00000546812 PIK3C2AO00443 1686 aa13.37□□□□□ -0.27
SSH1-205ENST00000546812 ERBB3P21860 1342 aa13.37□□□□□ -0.27
SSH1-205ENST00000546812 EVC2Q86UK5 1308 aa13.37□□□□□ -0.27
SSH1-205ENST00000546812 NFAT5O94916 1531 aa13.34□□□□□ -0.27
SSH1-205ENST00000546812 KCNQ4P56696 695 aa13.34□□□□□ -0.27
SSH1-205ENST00000546812 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.27
SSH1-205ENST00000546812 DDX54Q8TDD1 881 aaKnown RBP13.33□□□□□ -0.28
SSH1-205ENST00000546812 ANKRD24Q8TF21 1146 aa13.33□□□□□ -0.28
SSH1-205ENST00000546812 CD2APQ9Y5K6 639 aa13.32□□□□□ -0.28
SSH1-205ENST00000546812 USP31Q70CQ4 1352 aa13.32□□□□□ -0.28
SSH1-205ENST00000546812 COL24A1Q17RW2 1714 aa13.31□□□□□ -0.28
SSH1-205ENST00000546812 MSH5O43196 834 aa13.31□□□□□ -0.28
SSH1-205ENST00000546812 PRIM1P49642 420 aaKnown RBP13.31□□□□□ -0.28
SSH1-205ENST00000546812 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
SSH1-205ENST00000546812 SYTL4Q96C24 671 aaPredicted RBP13.31□□□□□ -0.28
SSH1-205ENST00000546812 BTAF1O14981 1849 aa13.31□□□□□ -0.28
SSH1-205ENST00000546812 ADCY9O60503 1353 aa13.31□□□□□ -0.28
SSH1-205ENST00000546812 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
SSH1-205ENST00000546812 RGPD5Q99666 1765 aa13.3□□□□□ -0.28
SSH1-205ENST00000546812 ZNF526Q8TF50 670 aaPredicted RBP13.3□□□□□ -0.28
SSH1-205ENST00000546812 QRICH2Q9H0J4 1663 aa13.3□□□□□ -0.28
SSH1-205ENST00000546812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
SSH1-205ENST00000546812 CCNL1Q9UK58 526 aaPredicted RBP13.29□□□□□ -0.28
SSH1-205ENST00000546812 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
SSH1-205ENST00000546812 ANKRD36BQ8N2N9 1353 aa13.28□□□□□ -0.28
SSH1-205ENST00000546812 QSER1Q2KHR3 1735 aa13.27□□□□□ -0.28
SSH1-205ENST00000546812 NME9Q86XW9 330 aa13.27□□□□□ -0.29
SSH1-205ENST00000546812 KIF3CO14782 793 aa13.26□□□□□ -0.29
SSH1-205ENST00000546812 NSD2O96028 1365 aa13.26□□□□□ -0.29
SSH1-205ENST00000546812 APLP1P51693 650 aa13.26□□□□□ -0.29
SSH1-205ENST00000546812 KAT6BQ8WYB5 2073 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms