RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 NEURL4Q96JN8 1562 aa9.3□□□□□ -0.92
PRKDC-211ENST00000546304 PTGDRQ13258 359 aa9.3□□□□□ -0.92
PRKDC-211ENST00000546304 FAM98CQ17RN3 349 aaKnown RBP9.3□□□□□ -0.92
PRKDC-211ENST00000546304 WNT2BQ93097 391 aa9.3□□□□□ -0.92
PRKDC-211ENST00000546304 IFT172Q9UG01 1749 aa9.3□□□□□ -0.92
PRKDC-211ENST00000546304 THSD4Q6ZMP0 1018 aa9.29□□□□□ -0.92
PRKDC-211ENST00000546304 SLIT1O75093 1534 aa9.29□□□□□ -0.92
PRKDC-211ENST00000546304 PPLO60437 1756 aa9.29□□□□□ -0.92
PRKDC-211ENST00000546304 ANKRD30BQ9BXX2 1392 aa9.28□□□□□ -0.92
PRKDC-211ENST00000546304 NUTM2FA1L443 756 aa9.28□□□□□ -0.92
PRKDC-211ENST00000546304 ANKK1Q8NFD2 765 aa9.28□□□□□ -0.92
PRKDC-211ENST00000546304 ZFRQ96KR1 1074 aaKnown RBP9.28□□□□□ -0.92
PRKDC-211ENST00000546304 SLC52A1Q9NWF4 448 aa9.28□□□□□ -0.92
PRKDC-211ENST00000546304 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
PRKDC-211ENST00000546304 ARHGAP23Q9P227 1491 aa9.28□□□□□ -0.92
PRKDC-211ENST00000546304 STRCQ7RTU9 1775 aa9.27□□□□□ -0.92
PRKDC-211ENST00000546304 NEXMIFQ5QGS0 1516 aa9.27□□□□□ -0.93
PRKDC-211ENST00000546304 NBPF26B4DH59 902 aa9.27□□□□□ -0.93
PRKDC-211ENST00000546304 PADI6Q6TGC4 694 aa9.27□□□□□ -0.93
PRKDC-211ENST00000546304 SPATA31E1Q6ZUB1 1445 aa9.26□□□□□ -0.93
PRKDC-211ENST00000546304 TATDN2Q93075 761 aa9.26□□□□□ -0.93
PRKDC-211ENST00000546304 IQGAP1P46940 1657 aa9.26□□□□□ -0.93
PRKDC-211ENST00000546304 ZFYVE9O95405 1425 aa9.25□□□□□ -0.93
PRKDC-211ENST00000546304 C3orf80F5H4A9 247 aa9.25□□□□□ -0.93
PRKDC-211ENST00000546304 FCHSD2O94868 740 aa9.25□□□□□ -0.93
PRKDC-211ENST00000546304 IDI1Q13907 227 aa9.25□□□□□ -0.93
PRKDC-211ENST00000546304 RBM26Q5T8P6 1007 aaKnown RBP9.25□□□□□ -0.93
PRKDC-211ENST00000546304 SCAF11Q99590 1463 aaKnown RBP9.25□□□□□ -0.93
PRKDC-211ENST00000546304 TMEM2Q9UHN6 1383 aa9.24□□□□□ -0.93
PRKDC-211ENST00000546304 SOWAHBA6NEL2 793 aa9.24□□□□□ -0.93
PRKDC-211ENST00000546304 RIMS2Q9UQ26 1411 aa9.23□□□□□ -0.93
PRKDC-211ENST00000546304 HSPA2P54652 639 aa9.23□□□□□ -0.93
PRKDC-211ENST00000546304 PNMA3Q9UL41 463 aa9.23□□□□□ -0.93
PRKDC-211ENST00000546304 NRXN3Q9Y4C0 1643 aa9.23□□□□□ -0.93
PRKDC-211ENST00000546304 MYOM2P54296 1465 aa9.22□□□□□ -0.93
PRKDC-211ENST00000546304 SMAPO00193 183 aa9.22□□□□□ -0.93
PRKDC-211ENST00000546304 NUDT18Q6ZVK8 323 aa9.22□□□□□ -0.93
PRKDC-211ENST00000546304 MED14O60244 1454 aa9.21□□□□□ -0.93
PRKDC-211ENST00000546304 DIP2AQ14689 1571 aa9.21□□□□□ -0.93
PRKDC-211ENST00000546304 SETBP1Q9Y6X0 1596 aa9.21□□□□□ -0.93
PRKDC-211ENST00000546304 LAMC1P11047 1609 aa9.21□□□□□ -0.93
PRKDC-211ENST00000546304 PTPN5P54829 565 aa9.21□□□□□ -0.94
PRKDC-211ENST00000546304 HIC1Q14526 733 aa9.21□□□□□ -0.94
PRKDC-211ENST00000546304 THEMISQ8N1K5 641 aaPredicted RBP9.21□□□□□ -0.94
PRKDC-211ENST00000546304 SETD1AO15047 1707 aaKnown RBP9.21□□□□□ -0.94
PRKDC-211ENST00000546304 GPR37O15354 613 aa9.2□□□□□ -0.94
PRKDC-211ENST00000546304 BCAMP50895 628 aa9.2□□□□□ -0.94
PRKDC-211ENST00000546304 LRCH3Q96II8 777 aa9.2□□□□□ -0.94
PRKDC-211ENST00000546304 EYA1Q99502 592 aa9.2□□□□□ -0.94
PRKDC-211ENST00000546304 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.2□□□□□ -0.94
PRKDC-211ENST00000546304 TULP1O00294 542 aaPredicted RBP9.19□□□□□ -0.94
PRKDC-211ENST00000546304 ZNF326Q5BKZ1 582 aaKnown RBP9.19□□□□□ -0.94
PRKDC-211ENST00000546304 CLSPNQ9HAW4 1339 aa9.19□□□□□ -0.94
PRKDC-211ENST00000546304 NPHP4O75161 1426 aaPredicted RBP9.19□□□□□ -0.94
PRKDC-211ENST00000546304 NYAP1Q6ZVC0 841 aa9.18□□□□□ -0.94
PRKDC-211ENST00000546304 NRXN1Q9ULB1 1477 aa9.18□□□□□ -0.94
PRKDC-211ENST00000546304 PLEKHG1Q9ULL1 1385 aa9.18□□□□□ -0.94
PRKDC-211ENST00000546304 ADGRG1Q9Y653 693 aa9.18□□□□□ -0.94
PRKDC-211ENST00000546304 PIK3C2GO75747 1445 aa9.17□□□□□ -0.94
PRKDC-211ENST00000546304 PPP1R15AO75807 674 aaPredicted RBP9.17□□□□□ -0.94
PRKDC-211ENST00000546304 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
PRKDC-211ENST00000546304 CCER1Q8TC90 406 aaPredicted RBP9.17□□□□□ -0.94
PRKDC-211ENST00000546304 EID1Q9Y6B2 187 aa9.17□□□□□ -0.94
PRKDC-211ENST00000546304 KIAA1210Q9ULL0 1709 aa9.17□□□□□ -0.94
PRKDC-211ENST00000546304 NWD1Q149M9 1564 aa9.16□□□□□ -0.94
PRKDC-211ENST00000546304 RPGRIP1LQ68CZ1 1315 aa9.16□□□□□ -0.94
PRKDC-211ENST00000546304 LTKP29376 864 aa9.16□□□□□ -0.94
PRKDC-211ENST00000546304 ANKLE2Q86XL3 938 aa9.16□□□□□ -0.94
PRKDC-211ENST00000546304 GPIHBP1Q8IV16 184 aa9.16□□□□□ -0.94
PRKDC-211ENST00000546304 RBM46Q8TBY0 533 aaKnown RBP9.16□□□□□ -0.94
PRKDC-211ENST00000546304 TSR3Q9UJK0 312 aaKnown RBP9.16□□□□□ -0.94
PRKDC-211ENST00000546304 ASXL1Q8IXJ9 1541 aa9.15□□□□□ -0.94
PRKDC-211ENST00000546304 ADAMTS13Q76LX8 1427 aa9.15□□□□□ -0.94
PRKDC-211ENST00000546304 TONSLQ96HA7 1378 aa9.15□□□□□ -0.94
PRKDC-211ENST00000546304 XRN1Q8IZH2 1706 aaKnown RBP9.15□□□□□ -0.94
PRKDC-211ENST00000546304 GNPATO15228 680 aa9.15□□□□□ -0.94
PRKDC-211ENST00000546304 RGL3Q3MIN7 710 aa9.15□□□□□ -0.94
PRKDC-211ENST00000546304 TXNDC2Q86VQ3 553 aa9.15□□□□□ -0.94
PRKDC-211ENST00000546304 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.15□□□□□ -0.94
PRKDC-211ENST00000546304 SIN3AQ96ST3 1273 aa9.15□□□□□ -0.94
PRKDC-211ENST00000546304 WBP1LQ9NX94 342 aa9.15□□□□□ -0.94
PRKDC-211ENST00000546304 ALKQ9UM73 1620 aa9.15□□□□□ -0.94
PRKDC-211ENST00000546304 STRCP1A6NGW2 1772 aa9.14□□□□□ -0.95
PRKDC-211ENST00000546304 KNDC1Q76NI1 1749 aa9.14□□□□□ -0.95
PRKDC-211ENST00000546304 TRPM1Q7Z4N2 1603 aa9.14□□□□□ -0.95
PRKDC-211ENST00000546304 HDGFP51858 240 aaKnown RBP9.14□□□□□ -0.95
PRKDC-211ENST00000546304 NUTM2DQ5VT03 806 aaPredicted RBP9.14□□□□□ -0.95
PRKDC-211ENST00000546304 PLA2G2EQ9NZK7 142 aa9.14□□□□□ -0.95
PRKDC-211ENST00000546304 HPS5Q9UPZ3 1129 aa9.14□□□□□ -0.95
PRKDC-211ENST00000546304 CHD2O14647 1828 aaKnown RBP9.14□□□□□ -0.95
PRKDC-211ENST00000546304 PRAG1Q86YV5 1406 aa9.14□□□□□ -0.95
PRKDC-211ENST00000546304 NEUROD1Q13562 356 aa9.13□□□□□ -0.95
PRKDC-211ENST00000546304 ADGRF5Q8IZF2 1346 aa9.12□□□□□ -0.95
PRKDC-211ENST00000546304 OATP04181 439 aa9.12□□□□□ -0.95
PRKDC-211ENST00000546304 DNAJB2P25686 324 aa9.12□□□□□ -0.95
PRKDC-211ENST00000546304 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.12□□□□□ -0.95
PRKDC-211ENST00000546304 NKTRP30414 1462 aaKnown RBP9.12□□□□□ -0.95
PRKDC-211ENST00000546304 ADGRB1O14514 1584 aa9.12□□□□□ -0.95
PRKDC-211ENST00000546304 FECHP22830 423 aa9.11□□□□□ -0.95
PRKDC-211ENST00000546304 PPP4CP60510 307 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms