RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 QTRT2Q9H974 415 aaKnown RBP28.38■■■□□ 2.13
SCARB1-211ENST00000546215 NRAPQ86VF7 1730 aa28.38■■■□□ 2.13
SCARB1-211ENST00000546215 ABCC6O95255 1503 aa28.36■■■□□ 2.13
SCARB1-211ENST00000546215 TNNT2P45379 298 aaPredicted RBP28.36■■■□□ 2.13
SCARB1-211ENST00000546215 TRPC5Q9UL62 973 aaPredicted RBP28.36■■■□□ 2.13
SCARB1-211ENST00000546215 ATRNO75882 1429 aa28.36■■■□□ 2.13
SCARB1-211ENST00000546215 IP6K1Q92551 441 aa28.34■■■□□ 2.13
SCARB1-211ENST00000546215 RGPD5Q99666 1765 aa28.34■■■□□ 2.13
SCARB1-211ENST00000546215 COL5A2P05997 1499 aaPredicted RBP28.33■■■□□ 2.13
SCARB1-211ENST00000546215 VPS72Q15906 364 aa28.33■■■□□ 2.12
SCARB1-211ENST00000546215 STRN4Q9NRL3 753 aa28.33■■■□□ 2.12
SCARB1-211ENST00000546215 MAP2P11137 1827 aaKnown RBP28.32■■■□□ 2.12
SCARB1-211ENST00000546215 AMPHP49418 695 aa28.32■■■□□ 2.12
SCARB1-211ENST00000546215 EVA1CP58658 441 aa28.32■■■□□ 2.12
SCARB1-211ENST00000546215 CNGB1Q14028 1251 aaPredicted RBP28.32■■■□□ 2.12
SCARB1-211ENST00000546215 EMILIN1Q9Y6C2 1016 aa28.32■■■□□ 2.12
SCARB1-211ENST00000546215 HOXC9P31274 260 aa28.31■■■□□ 2.12
SCARB1-211ENST00000546215 POLKQ9UBT6 870 aa28.31■■■□□ 2.12
SCARB1-211ENST00000546215 RTL1A6NKG5 1358 aa28.29■■■□□ 2.12
SCARB1-211ENST00000546215 KIF24Q5T7B8 1368 aa28.29■■■□□ 2.12
SCARB1-211ENST00000546215 GJD4Q96KN9 370 aaPredicted RBP28.28■■■□□ 2.12
SCARB1-211ENST00000546215 PEAK1Q9H792 1746 aa28.28■■■□□ 2.12
SCARB1-211ENST00000546215 BLMP54132 1417 aaPredicted RBP28.28■■■□□ 2.12
SCARB1-211ENST00000546215 LARP1Q6PKG0 1096 aaKnown RBP28.28■■■□□ 2.12
SCARB1-211ENST00000546215 FLT4P35916 1363 aa28.26■■■□□ 2.11
SCARB1-211ENST00000546215 RXRBP28702 533 aa28.26■■■□□ 2.11
SCARB1-211ENST00000546215 RBM6P78332 1123 aaKnown RBP28.26■■■□□ 2.11
SCARB1-211ENST00000546215 ERBB3P21860 1342 aa28.25■■■□□ 2.11
SCARB1-211ENST00000546215 SPATA31A5Q5VU36 1347 aa28.25■■■□□ 2.11
SCARB1-211ENST00000546215 SPATA31A7Q8IWB4 1347 aa28.25■■■□□ 2.11
SCARB1-211ENST00000546215 CCDC9Q9Y3X0 531 aaKnown RBP28.25■■■□□ 2.11
SCARB1-211ENST00000546215 WDR17Q8IZU2 1322 aa28.25■■■□□ 2.11
SCARB1-211ENST00000546215 PPM1GO15355 546 aaPredicted RBP28.24■■■□□ 2.11
SCARB1-211ENST00000546215 HSP90AB2PQ58FF8 381 aa28.24■■■□□ 2.11
SCARB1-211ENST00000546215 ANKRD24Q8TF21 1146 aa28.24■■■□□ 2.11
SCARB1-211ENST00000546215 SMG6Q86US8 1419 aaKnown RBP28.23■■■□□ 2.11
SCARB1-211ENST00000546215 GLI3P10071 1580 aa28.23■■■□□ 2.11
SCARB1-211ENST00000546215 INSRP06213 1382 aa28.22■■■□□ 2.11
SCARB1-211ENST00000546215 SPATA31A1Q5TZJ5 1347 aa28.22■■■□□ 2.11
SCARB1-211ENST00000546215 CRB1P82279 1406 aa28.22■■■□□ 2.11
SCARB1-211ENST00000546215 CSB-PGBD3P0DP91 1061 aa28.2■■■□□ 2.11
SCARB1-211ENST00000546215 TOM1L2Q6ZVM7 507 aa28.2■■■□□ 2.1
SCARB1-211ENST00000546215 LTV1Q96GA3 475 aaPredicted RBP28.2■■■□□ 2.1
SCARB1-211ENST00000546215 USP35Q9P2H5 1018 aa28.19■■■□□ 2.1
SCARB1-211ENST00000546215 PARD3Q8TEW0 1356 aa28.17■■■□□ 2.1
SCARB1-211ENST00000546215 MTHFSP49914 203 aa28.17■■■□□ 2.1
SCARB1-211ENST00000546215 CARD10Q9BWT7 1032 aa28.17■■■□□ 2.1
SCARB1-211ENST00000546215 ONECUT3O60422 494 aaPredicted RBP28.16■■■□□ 2.1
SCARB1-211ENST00000546215 CDK12Q9NYV4 1490 aaPredicted RBP28.15■■■□□ 2.1
SCARB1-211ENST00000546215 TCP11L2Q8N4U5 519 aa28.15■■■□□ 2.1
SCARB1-211ENST00000546215 NLRP2Q9NX02 1062 aa28.15■■■□□ 2.1
SCARB1-211ENST00000546215 THRAP3Q9Y2W1 955 aaKnown RBP28.15■■■□□ 2.1
SCARB1-211ENST00000546215 FAM98CQ17RN3 349 aaKnown RBP28.14■■■□□ 2.1
SCARB1-211ENST00000546215 PPP2R1AP30153 589 aa28.13■■■□□ 2.09
SCARB1-211ENST00000546215 ILDR2Q71H61 639 aa28.13■■■□□ 2.09
SCARB1-211ENST00000546215 FAM208AQ9UK61 1670 aaKnown RBP28.12■■■□□ 2.09
SCARB1-211ENST00000546215 BARGINQ6ZT62 677 aa28.12■■■□□ 2.09
SCARB1-211ENST00000546215 RALBP1Q15311 655 aa28.11■■■□□ 2.09
SCARB1-211ENST00000546215 RGS12O14924 1447 aa28.11■■■□□ 2.09
SCARB1-211ENST00000546215 EIF4A2Q14240 407 aaKnown RBP28.11■■■□□ 2.09
SCARB1-211ENST00000546215 RGPD2P0DJD1 1756 aa28.1■■■□□ 2.09
SCARB1-211ENST00000546215 NBPF6Q5VWK0 638 aa28.1■■■□□ 2.09
SCARB1-211ENST00000546215 NBPF4Q96M43 638 aa28.1■■■□□ 2.09
SCARB1-211ENST00000546215 SEPT12Q8IYM1 358 aa28.07■■■□□ 2.08
SCARB1-211ENST00000546215 THSD7AQ9UPZ6 1657 aa28.06■■■□□ 2.08
SCARB1-211ENST00000546215 PRKRIP1Q9H875 184 aaPredicted RBP28.06■■■□□ 2.08
SCARB1-211ENST00000546215 IL13P35225 146 aa28.04■■■□□ 2.08
SCARB1-211ENST00000546215 EYA1Q99502 592 aa28.04■■■□□ 2.08
SCARB1-211ENST00000546215 DISP2A7MBM2 1401 aa28.03■■■□□ 2.08
SCARB1-211ENST00000546215 A0A0G2JS52 829 aa28.03■■■□□ 2.08
SCARB1-211ENST00000546215 MYT1Q01538 1121 aa28.03■■■□□ 2.08
SCARB1-211ENST00000546215 USHBP1Q8N6Y0 703 aa28.03■■■□□ 2.08
SCARB1-211ENST00000546215 COL3A1P02461 1466 aaPredicted RBP28.02■■■□□ 2.08
SCARB1-211ENST00000546215 WNK3Q9BYP7 1800 aa28.02■■■□□ 2.08
SCARB1-211ENST00000546215 CDCA7Q9BWT1 371 aaPredicted RBP28.02■■■□□ 2.08
SCARB1-211ENST00000546215 NCAPD2Q15021 1401 aa28.01■■■□□ 2.07
SCARB1-211ENST00000546215 BRWD3Q6RI45 1802 aa28■■■□□ 2.07
SCARB1-211ENST00000546215 DIAPH1O60610 1272 aaKnown RBP27.99■■■□□ 2.07
SCARB1-211ENST00000546215 IL2RBP14784 551 aa27.99■■■□□ 2.07
SCARB1-211ENST00000546215 IGSF1Q8N6C5 1336 aa27.99■■■□□ 2.07
SCARB1-211ENST00000546215 MYBBP1AQ9BQG0 1328 aaKnown RBP27.99■■■□□ 2.07
SCARB1-211ENST00000546215 CFAP53Q96M91 514 aa27.99■■■□□ 2.07
SCARB1-211ENST00000546215 PARP4Q9UKK3 1724 aaKnown RBP27.98■■■□□ 2.07
SCARB1-211ENST00000546215 RGPD1P0DJD0 1748 aa27.96■■■□□ 2.07
SCARB1-211ENST00000546215 EP400Q96L91 3159 aa27.96■■■□□ 2.07
SCARB1-211ENST00000546215 KRT27Q7Z3Y8 459 aa27.94■■■□□ 2.06
SCARB1-211ENST00000546215 MEGF6O75095 1541 aa27.94■■■□□ 2.06
SCARB1-211ENST00000546215 DDB1Q16531 1140 aa27.94■■■□□ 2.06
SCARB1-211ENST00000546215 LRRC37A3O60309 1634 aa27.93■■■□□ 2.06
SCARB1-211ENST00000546215 RAPGEF4Q8WZA2 1011 aa27.93■■■□□ 2.06
SCARB1-211ENST00000546215 ANP32CO43423 234 aa27.92■■■□□ 2.06
SCARB1-211ENST00000546215 EXOC5O00471 708 aa27.91■■■□□ 2.06
SCARB1-211ENST00000546215 PDE3BQ13370 1112 aa27.9■■■□□ 2.06
SCARB1-211ENST00000546215 AEBP1Q8IUX7 1158 aa27.9■■■□□ 2.06
SCARB1-211ENST00000546215 OVOS2A0A0G2JMS6 1433 aa27.9■■■□□ 2.06
SCARB1-211ENST00000546215 TATP17735 454 aaPredicted RBP27.9■■■□□ 2.06
SCARB1-211ENST00000546215 SULT6B1Q6IMI4 303 aa27.9■■■□□ 2.06
SCARB1-211ENST00000546215 KDRP35968 1356 aa27.89■■■□□ 2.06
SCARB1-211ENST00000546215 TNS2Q63HR2 1409 aa27.89■■■□□ 2.06
SCARB1-211ENST00000546215 U2SURPO15042 1029 aaKnown RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms