RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 CFAP99D6REC4 459 aa5.92□□□□□ -1.46
CUL3-215ENST00000546102 F12P00748 615 aaPredicted RBP5.92□□□□□ -1.46
CUL3-215ENST00000546102 HELBQ8NG08 1087 aaPredicted RBP5.92□□□□□ -1.46
CUL3-215ENST00000546102 ITPKCQ96DU7 683 aa5.92□□□□□ -1.46
CUL3-215ENST00000546102 MCM6Q14566 821 aa5.91□□□□□ -1.46
CUL3-215ENST00000546102 LINC00528Q8N1L1 170 aa5.91□□□□□ -1.46
CUL3-215ENST00000546102 ZFAND3Q9H8U3 227 aa5.91□□□□□ -1.46
CUL3-215ENST00000546102 PCDHB15Q9Y5E8 787 aa5.91□□□□□ -1.46
CUL3-215ENST00000546102 RB1CC1Q8TDY2 1594 aa5.9□□□□□ -1.46
CUL3-215ENST00000546102 VSIG8P0DPA2 414 aa5.9□□□□□ -1.46
CUL3-215ENST00000546102 VASH1Q7L8A9 365 aaPredicted RBP5.9□□□□□ -1.46
CUL3-215ENST00000546102 KLF16Q9BXK1 252 aaPredicted RBP5.9□□□□□ -1.46
CUL3-215ENST00000546102 ZNF777Q9ULD5 760 aaPredicted RBP5.9□□□□□ -1.46
CUL3-215ENST00000546102 MAGEB6P1A0A0J9YX57 407 aa5.89□□□□□ -1.47
CUL3-215ENST00000546102 FSHRP23945 695 aa5.89□□□□□ -1.47
CUL3-215ENST00000546102 PROSER2Q86WR7 435 aaPredicted RBP5.89□□□□□ -1.47
CUL3-215ENST00000546102 MEIOBQ8N635 442 aa5.89□□□□□ -1.47
CUL3-215ENST00000546102 CABLES1Q8TDN4 633 aa5.89□□□□□ -1.47
CUL3-215ENST00000546102 TSEN34Q9BSV6 310 aaKnown RBP5.89□□□□□ -1.47
CUL3-215ENST00000546102 EMILIN1Q9Y6C2 1016 aa5.89□□□□□ -1.47
CUL3-215ENST00000546102 PPFIA3O75145 1194 aa5.88□□□□□ -1.47
CUL3-215ENST00000546102 NR3C2P08235 984 aa5.88□□□□□ -1.47
CUL3-215ENST00000546102 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.88□□□□□ -1.47
CUL3-215ENST00000546102 MAP4K5Q9Y4K4 846 aa5.88□□□□□ -1.47
CUL3-215ENST00000546102 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
CUL3-215ENST00000546102 GRM5P41594 1212 aa5.87□□□□□ -1.47
CUL3-215ENST00000546102 SH3D19Q5HYK7 790 aa5.87□□□□□ -1.47
CUL3-215ENST00000546102 CCDC116Q8IYX3 515 aa5.87□□□□□ -1.47
CUL3-215ENST00000546102 GPKOWQ92917 476 aaPredicted RBP eCLIP5.87□□□□□ -1.47
CUL3-215ENST00000546102 POM121Q96HA1 1249 aa5.87□□□□□ -1.47
CUL3-215ENST00000546102 PGPEP1Q9NXJ5 209 aa5.87□□□□□ -1.47
CUL3-215ENST00000546102 ATP1B4Q9UN42 357 aaPredicted RBP5.87□□□□□ -1.47
CUL3-215ENST00000546102 RNF225M0QZC1 329 aaPredicted RBP5.86□□□□□ -1.47
CUL3-215ENST00000546102 PER1O15534 1290 aaPredicted RBP5.86□□□□□ -1.47
CUL3-215ENST00000546102 C4orf48Q5BLP8 95 aa5.86□□□□□ -1.47
CUL3-215ENST00000546102 CCDC97Q96F63 343 aaPredicted RBP5.86□□□□□ -1.47
CUL3-215ENST00000546102 CARD14Q9BXL6 1004 aa5.86□□□□□ -1.47
CUL3-215ENST00000546102 SHROOM4Q9ULL8 1493 aa5.85□□□□□ -1.47
CUL3-215ENST00000546102 SOS2Q07890 1332 aaPredicted RBP5.85□□□□□ -1.47
CUL3-215ENST00000546102 TTLL8A6PVC2 850 aa5.85□□□□□ -1.47
CUL3-215ENST00000546102 RAD21O60216 631 aa5.85□□□□□ -1.47
CUL3-215ENST00000546102 TUSC1Q2TAM9 212 aa5.85□□□□□ -1.47
CUL3-215ENST00000546102 MYSM1Q5VVJ2 828 aa5.85□□□□□ -1.47
CUL3-215ENST00000546102 TRMT44Q8IYL2 757 aaKnown RBP5.85□□□□□ -1.47
CUL3-215ENST00000546102 KCTD17Q8N5Z5 321 aa5.85□□□□□ -1.47
CUL3-215ENST00000546102 TRAIPQ9BWF2 469 aa5.85□□□□□ -1.47
CUL3-215ENST00000546102 SERPINA10Q9UK55 444 aa5.85□□□□□ -1.47
CUL3-215ENST00000546102 CDV3Q9UKY7 258 aaKnown RBP5.85□□□□□ -1.47
CUL3-215ENST00000546102 SCRIBQ14160 1630 aa5.85□□□□□ -1.47
CUL3-215ENST00000546102 LILRB3O75022 631 aa5.84□□□□□ -1.47
CUL3-215ENST00000546102 CLK2P49760 499 aaKnown RBP5.84□□□□□ -1.47
CUL3-215ENST00000546102 SH3RF1Q7Z6J0 888 aa5.84□□□□□ -1.47
CUL3-215ENST00000546102 AEBP1Q8IUX7 1158 aa5.84□□□□□ -1.47
CUL3-215ENST00000546102 C1QTNF2Q9BXJ5 285 aa5.84□□□□□ -1.47
CUL3-215ENST00000546102 LIMD1Q9UGP4 676 aa5.84□□□□□ -1.47
CUL3-215ENST00000546102 DNMT3LQ9UJW3 386 aa5.84□□□□□ -1.47
CUL3-215ENST00000546102 DHX9Q08211 1270 aaKnown RBP5.83□□□□□ -1.48
CUL3-215ENST00000546102 KCNMA1Q12791 1236 aa5.83□□□□□ -1.48
CUL3-215ENST00000546102 SKIV2LQ15477 1246 aaKnown RBP5.83□□□□□ -1.48
CUL3-215ENST00000546102 QPCTQ16769 361 aa5.83□□□□□ -1.48
CUL3-215ENST00000546102 FNBP4Q8N3X1 1017 aaPredicted RBP5.83□□□□□ -1.48
CUL3-215ENST00000546102 PROCA1Q8NCQ7 364 aaPredicted RBP5.83□□□□□ -1.48
CUL3-215ENST00000546102 SLC10A4Q96EP9 437 aa5.83□□□□□ -1.48
CUL3-215ENST00000546102 FIGNL2A6NMB9 653 aa5.82□□□□□ -1.48
CUL3-215ENST00000546102 SH3BP5LQ7L8J4 393 aa5.82□□□□□ -1.48
CUL3-215ENST00000546102 ZBTB33Q86T24 672 aa5.82□□□□□ -1.48
CUL3-215ENST00000546102 CNTNAP3BQ96NU0 1288 aa5.82□□□□□ -1.48
CUL3-215ENST00000546102 ARHGAP9Q9BRR9 750 aa5.82□□□□□ -1.48
CUL3-215ENST00000546102 CNTNAP3Q9BZ76 1288 aa5.82□□□□□ -1.48
CUL3-215ENST00000546102 PTSQ03393 145 aa5.81□□□□□ -1.48
CUL3-215ENST00000546102 ERFEQ4G0M1 354 aa5.81□□□□□ -1.48
CUL3-215ENST00000546102 PPP1R26Q5T8A7 1209 aaPredicted RBP5.81□□□□□ -1.48
CUL3-215ENST00000546102 TMEM151AQ8N4L1 468 aa5.81□□□□□ -1.48
CUL3-215ENST00000546102 POLR3EQ9NVU0 708 aa5.81□□□□□ -1.48
CUL3-215ENST00000546102 RTL5Q5HYW3 569 aaPredicted RBP5.8□□□□□ -1.48
CUL3-215ENST00000546102 PDXDC2PQ6P474 469 aa5.8□□□□□ -1.48
CUL3-215ENST00000546102 SVOPQ8N4V2 548 aa5.8□□□□□ -1.48
CUL3-215ENST00000546102 RETREG2Q8NC44 543 aa5.8□□□□□ -1.48
CUL3-215ENST00000546102 PNMA1Q8ND90 353 aa5.8□□□□□ -1.48
CUL3-215ENST00000546102 TRIM52Q96A61 297 aa5.8□□□□□ -1.48
CUL3-215ENST00000546102 KCTD15Q96SI1 283 aaPredicted RBP5.8□□□□□ -1.48
CUL3-215ENST00000546102 COG6Q9Y2V7 657 aa5.8□□□□□ -1.48
CUL3-215ENST00000546102 CDC14CA4D256 554 aa5.79□□□□□ -1.48
CUL3-215ENST00000546102 SPINT1O43278 529 aa5.79□□□□□ -1.48
CUL3-215ENST00000546102 GDF11O95390 407 aa5.79□□□□□ -1.48
CUL3-215ENST00000546102 CCDC155Q8N6L0 562 aa5.79□□□□□ -1.48
CUL3-215ENST00000546102 COL25A1Q9BXS0 654 aaPredicted RBP5.79□□□□□ -1.48
CUL3-215ENST00000546102 POLMQ9NP87 494 aaPredicted RBP5.79□□□□□ -1.48
CUL3-215ENST00000546102 ZC3H4Q9UPT8 1303 aaKnown RBP5.78□□□□□ -1.48
CUL3-215ENST00000546102 PTK2Q05397 1052 aa5.78□□□□□ -1.48
CUL3-215ENST00000546102 CBLBQ13191 982 aa5.78□□□□□ -1.48
CUL3-215ENST00000546102 Q6ZVU0 165 aa5.78□□□□□ -1.48
CUL3-215ENST00000546102 SV2AQ7L0J3 742 aa5.78□□□□□ -1.48
CUL3-215ENST00000546102 FKBPLQ9UIM3 349 aa5.78□□□□□ -1.48
CUL3-215ENST00000546102 ZNF330Q9Y3S2 320 aaPredicted RBP5.78□□□□□ -1.48
CUL3-215ENST00000546102 MARSP56192 900 aaKnown RBP5.77□□□□□ -1.49
CUL3-215ENST00000546102 RASSF7Q02833 373 aa5.77□□□□□ -1.49
CUL3-215ENST00000546102 CTDSPL2Q05D32 466 aa5.77□□□□□ -1.49
CUL3-215ENST00000546102 NBPF20Q3BBV1 942 aa5.77□□□□□ -1.49
CUL3-215ENST00000546102 NANOS1Q8WY41 292 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms