RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 LMO7Q8WWI1 1683 aa25.07■■□□□ 1.6
CCDC189-212ENST00000546006 PPM1GO15355 546 aaPredicted RBP25.07■■□□□ 1.6
CCDC189-212ENST00000546006 HOXC9P31274 260 aa25.07■■□□□ 1.6
CCDC189-212ENST00000546006 FLT4P35916 1363 aa25.07■■□□□ 1.6
CCDC189-212ENST00000546006 PEAK1Q9H792 1746 aa25.07■■□□□ 1.6
CCDC189-212ENST00000546006 MTHFSP49914 203 aa25.07■■□□□ 1.6
CCDC189-212ENST00000546006 AXIN2Q9Y2T1 843 aa25.07■■□□□ 1.6
CCDC189-212ENST00000546006 SLIT2O94813 1529 aa25.06■■□□□ 1.6
CCDC189-212ENST00000546006 MYBBP1AQ9BQG0 1328 aaKnown RBP25.05■■□□□ 1.6
CCDC189-212ENST00000546006 PLCH1Q4KWH8 1693 aa25.05■■□□□ 1.6
CCDC189-212ENST00000546006 CAMTA1Q9Y6Y1 1673 aa25.05■■□□□ 1.6
CCDC189-212ENST00000546006 FNBP4Q8N3X1 1017 aaPredicted RBP25.05■■□□□ 1.6
CCDC189-212ENST00000546006 BTG4Q9NY30 223 aa25.05■■□□□ 1.6
CCDC189-212ENST00000546006 BLMP54132 1417 aaPredicted RBP25.05■■□□□ 1.6
CCDC189-212ENST00000546006 CDK12Q9NYV4 1490 aaPredicted RBP25.03■■□□□ 1.6
CCDC189-212ENST00000546006 HSP90AB2PQ58FF8 381 aa25.02■■□□□ 1.6
CCDC189-212ENST00000546006 NWD2Q9ULI1 1742 aa25.02■■□□□ 1.6
CCDC189-212ENST00000546006 AFF2P51816 1311 aa25.02■■□□□ 1.6
CCDC189-212ENST00000546006 INSRP06213 1382 aa25.02■■□□□ 1.6
CCDC189-212ENST00000546006 COL5A2P05997 1499 aaPredicted RBP25.01■■□□□ 1.59
CCDC189-212ENST00000546006 BCL9LQ86UU0 1499 aa25■■□□□ 1.59
CCDC189-212ENST00000546006 RGPD5Q99666 1765 aa25■■□□□ 1.59
CCDC189-212ENST00000546006 UNC5CLQ8IV45 518 aa24.99■■□□□ 1.59
CCDC189-212ENST00000546006 USP21Q9UK80 565 aa24.99■■□□□ 1.59
CCDC189-212ENST00000546006 EVA1CP58658 441 aa24.98■■□□□ 1.59
CCDC189-212ENST00000546006 ANKRD24Q8TF21 1146 aa24.98■■□□□ 1.59
CCDC189-212ENST00000546006 ERBB3P21860 1342 aa24.98■■□□□ 1.59
CCDC189-212ENST00000546006 NRAPQ86VF7 1730 aa24.98■■□□□ 1.59
CCDC189-212ENST00000546006 PHF23Q9BUL5 403 aaPredicted RBP24.97■■□□□ 1.59
CCDC189-212ENST00000546006 STRN4Q9NRL3 753 aa24.97■■□□□ 1.59
CCDC189-212ENST00000546006 RGS17Q9UGC6 210 aaPredicted RBP24.97■■□□□ 1.59
CCDC189-212ENST00000546006 LTV1Q96GA3 475 aaPredicted RBP24.96■■□□□ 1.59
CCDC189-212ENST00000546006 CFAP53Q96M91 514 aa24.96■■□□□ 1.59
CCDC189-212ENST00000546006 WDR17Q8IZU2 1322 aa24.95■■□□□ 1.58
CCDC189-212ENST00000546006 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.95■■□□□ 1.58
CCDC189-212ENST00000546006 CSB-PGBD3P0DP91 1061 aa24.94■■□□□ 1.58
CCDC189-212ENST00000546006 EIF4A2Q14240 407 aaKnown RBP24.94■■□□□ 1.58
CCDC189-212ENST00000546006 COL3A1P02461 1466 aaPredicted RBP24.93■■□□□ 1.58
CCDC189-212ENST00000546006 ZNF772Q68DY9 489 aaPredicted RBP24.93■■□□□ 1.58
CCDC189-212ENST00000546006 LARP1Q6PKG0 1096 aaKnown RBP24.93■■□□□ 1.58
CCDC189-212ENST00000546006 VPS72Q15906 364 aa24.91■■□□□ 1.58
CCDC189-212ENST00000546006 DIAPH1O60610 1272 aaKnown RBP24.91■■□□□ 1.58
CCDC189-212ENST00000546006 IL13P35225 146 aa24.91■■□□□ 1.58
CCDC189-212ENST00000546006 TRPC5Q9UL62 973 aaPredicted RBP24.91■■□□□ 1.58
CCDC189-212ENST00000546006 CRB1P82279 1406 aa24.9■■□□□ 1.58
CCDC189-212ENST00000546006 TOM1L2Q6ZVM7 507 aa24.9■■□□□ 1.58
CCDC189-212ENST00000546006 ATRNO75882 1429 aa24.9■■□□□ 1.58
CCDC189-212ENST00000546006 FAM208AQ9UK61 1670 aaKnown RBP24.89■■□□□ 1.58
CCDC189-212ENST00000546006 NLRP2Q9NX02 1062 aa24.88■■□□□ 1.57
CCDC189-212ENST00000546006 ILDR2Q71H61 639 aa24.87■■□□□ 1.57
CCDC189-212ENST00000546006 CARD10Q9BWT7 1032 aa24.87■■□□□ 1.57
CCDC189-212ENST00000546006 QTRT2Q9H974 415 aaKnown RBP24.87■■□□□ 1.57
CCDC189-212ENST00000546006 SPATA31A5Q5VU36 1347 aa24.87■■□□□ 1.57
CCDC189-212ENST00000546006 SPATA31A7Q8IWB4 1347 aa24.87■■□□□ 1.57
CCDC189-212ENST00000546006 NBPF6Q5VWK0 638 aa24.86■■□□□ 1.57
CCDC189-212ENST00000546006 NBPF4Q96M43 638 aa24.86■■□□□ 1.57
CCDC189-212ENST00000546006 EYA1Q99502 592 aa24.86■■□□□ 1.57
CCDC189-212ENST00000546006 CCDC9Q9Y3X0 531 aaKnown RBP24.86■■□□□ 1.57
CCDC189-212ENST00000546006 SPATA31A1Q5TZJ5 1347 aa24.85■■□□□ 1.57
CCDC189-212ENST00000546006 MIER1Q8N108 512 aa24.85■■□□□ 1.57
CCDC189-212ENST00000546006 CCDC184Q52MB2 194 aa24.84■■□□□ 1.57
CCDC189-212ENST00000546006 POTEAQ6S8J7 498 aa24.84■■□□□ 1.57
CCDC189-212ENST00000546006 GJD4Q96KN9 370 aaPredicted RBP24.84■■□□□ 1.57
CCDC189-212ENST00000546006 NUDCQ9Y266 331 aa24.84■■□□□ 1.57
CCDC189-212ENST00000546006 IGSF1Q8N6C5 1336 aa24.84■■□□□ 1.57
CCDC189-212ENST00000546006 RGPD2P0DJD1 1756 aa24.83■■□□□ 1.57
CCDC189-212ENST00000546006 USP35Q9P2H5 1018 aa24.83■■□□□ 1.57
CCDC189-212ENST00000546006 RGPD1P0DJD0 1748 aa24.82■■□□□ 1.56
CCDC189-212ENST00000546006 U2SURPO15042 1029 aaKnown RBP24.81■■□□□ 1.56
CCDC189-212ENST00000546006 TCP11L2Q8N4U5 519 aa24.81■■□□□ 1.56
CCDC189-212ENST00000546006 USHBP1Q8N6Y0 703 aa24.81■■□□□ 1.56
CCDC189-212ENST00000546006 THRAP3Q9Y2W1 955 aaKnown RBP24.81■■□□□ 1.56
CCDC189-212ENST00000546006 NCAPD2Q15021 1401 aa24.81■■□□□ 1.56
CCDC189-212ENST00000546006 MRS2Q9HD23 443 aa24.81■■□□□ 1.56
CCDC189-212ENST00000546006 GLI3P10071 1580 aa24.79■■□□□ 1.56
CCDC189-212ENST00000546006 CCER2I3L3R5 266 aa24.79■■□□□ 1.56
CCDC189-212ENST00000546006 RBM6P78332 1123 aaKnown RBP24.77■■□□□ 1.56
CCDC189-212ENST00000546006 SULT6B1Q6IMI4 303 aa24.77■■□□□ 1.56
CCDC189-212ENST00000546006 BARGINQ6ZT62 677 aa24.77■■□□□ 1.56
CCDC189-212ENST00000546006 U2AF1L5P0DN76 240 aaPredicted RBP24.76■■□□□ 1.55
CCDC189-212ENST00000546006 U2AF1Q01081 240 aaKnown RBP eCLIP24.76■■□□□ 1.55
CCDC189-212ENST00000546006 AEBP1Q8IUX7 1158 aa24.76■■□□□ 1.55
CCDC189-212ENST00000546006 KDRP35968 1356 aa24.75■■□□□ 1.55
CCDC189-212ENST00000546006 HMOX1P09601 288 aa24.75■■□□□ 1.55
CCDC189-212ENST00000546006 RXRBP28702 533 aa24.75■■□□□ 1.55
CCDC189-212ENST00000546006 FAM98CQ17RN3 349 aaKnown RBP24.75■■□□□ 1.55
CCDC189-212ENST00000546006 WDR43Q15061 677 aaKnown RBP eCLIP24.74■■□□□ 1.55
CCDC189-212ENST00000546006 DISP2A7MBM2 1401 aa24.73■■□□□ 1.55
CCDC189-212ENST00000546006 IL2RBP14784 551 aa24.73■■□□□ 1.55
CCDC189-212ENST00000546006 ONECUT3O60422 494 aaPredicted RBP24.72■■□□□ 1.55
CCDC189-212ENST00000546006 RAPGEF4Q8WZA2 1011 aa24.72■■□□□ 1.55
CCDC189-212ENST00000546006 CDCA7Q9BWT1 371 aaPredicted RBP24.72■■□□□ 1.55
CCDC189-212ENST00000546006 PNISRQ8TF01 805 aaKnown RBP24.71■■□□□ 1.55
CCDC189-212ENST00000546006 WNK3Q9BYP7 1800 aa24.71■■□□□ 1.55
CCDC189-212ENST00000546006 MEGF6O75095 1541 aa24.71■■□□□ 1.55
CCDC189-212ENST00000546006 TATP17735 454 aaPredicted RBP24.71■■□□□ 1.55
CCDC189-212ENST00000546006 FCHSD2O94868 740 aa24.7■■□□□ 1.54
CCDC189-212ENST00000546006 RSPH6AQ9H0K4 717 aa24.7■■□□□ 1.54
CCDC189-212ENST00000546006 ADAMTS8Q9UP79 889 aa24.68■■□□□ 1.54
CCDC189-212ENST00000546006 THSD7AQ9UPZ6 1657 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms