RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 NUTM2AQ8IVF1 878 aaPredicted RBP22.89■■□□□ 1.25
CADM1-220ENST00000546000 RTL1A6NKG5 1358 aa22.89■■□□□ 1.25
CADM1-220ENST00000546000 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
CADM1-220ENST00000546000 LRP6O75581 1613 aa22.88■■□□□ 1.25
CADM1-220ENST00000546000 RGPD5Q99666 1765 aa22.88■■□□□ 1.25
CADM1-220ENST00000546000 CPDO75976 1380 aa22.88■■□□□ 1.25
CADM1-220ENST00000546000 CFAP53Q96M91 514 aa22.87■■□□□ 1.25
CADM1-220ENST00000546000 LMO7Q8WWI1 1683 aa22.87■■□□□ 1.25
CADM1-220ENST00000546000 INSRP06213 1382 aa22.86■■□□□ 1.25
CADM1-220ENST00000546000 LTV1Q96GA3 475 aaPredicted RBP22.85■■□□□ 1.25
CADM1-220ENST00000546000 PRDM11Q9NQV5 511 aa22.85■■□□□ 1.25
CADM1-220ENST00000546000 AXIN2Q9Y2T1 843 aa22.85■■□□□ 1.25
CADM1-220ENST00000546000 ADAMTS2O95450 1211 aa22.84■■□□□ 1.25
CADM1-220ENST00000546000 EIF4A2Q14240 407 aaKnown RBP22.84■■□□□ 1.25
CADM1-220ENST00000546000 PNISRQ8TF01 805 aaKnown RBP22.84■■□□□ 1.25
CADM1-220ENST00000546000 IP6K1Q92551 441 aa22.84■■□□□ 1.25
CADM1-220ENST00000546000 FAM9BQ8IZU0 186 aa22.83■■□□□ 1.25
CADM1-220ENST00000546000 KIF24Q5T7B8 1368 aa22.83■■□□□ 1.25
CADM1-220ENST00000546000 CAMTA1Q9Y6Y1 1673 aa22.82■■□□□ 1.24
CADM1-220ENST00000546000 DIAPH1O60610 1272 aaKnown RBP22.82■■□□□ 1.24
CADM1-220ENST00000546000 IL13P35225 146 aa22.82■■□□□ 1.24
CADM1-220ENST00000546000 ABCC6O95255 1503 aa22.82■■□□□ 1.24
CADM1-220ENST00000546000 PLCH1Q4KWH8 1693 aa22.81■■□□□ 1.24
CADM1-220ENST00000546000 RGPD1P0DJD0 1748 aa22.81■■□□□ 1.24
CADM1-220ENST00000546000 COL14A1Q05707 1796 aaKnown RBP22.81■■□□□ 1.24
CADM1-220ENST00000546000 FAM83GA6ND36 823 aa22.8■■□□□ 1.24
CADM1-220ENST00000546000 RGPD2P0DJD1 1756 aa22.8■■□□□ 1.24
CADM1-220ENST00000546000 BLMP54132 1417 aaPredicted RBP22.8■■□□□ 1.24
CADM1-220ENST00000546000 U2SURPO15042 1029 aaKnown RBP22.79■■□□□ 1.24
CADM1-220ENST00000546000 WDR43Q15061 677 aaKnown RBP eCLIP22.78■■□□□ 1.24
CADM1-220ENST00000546000 ANKRD24Q8TF21 1146 aa22.78■■□□□ 1.24
CADM1-220ENST00000546000 COL5A2P05997 1499 aaPredicted RBP22.77■■□□□ 1.24
CADM1-220ENST00000546000 SPATA31A6Q5VVP1 1343 aa22.77■■□□□ 1.24
CADM1-220ENST00000546000 SENP3-EIF4A1A0A087X0R7 540 aa22.76■■□□□ 1.23
CADM1-220ENST00000546000 ADAMTS8Q9UP79 889 aa22.76■■□□□ 1.23
CADM1-220ENST00000546000 NRAPQ86VF7 1730 aa22.75■■□□□ 1.23
CADM1-220ENST00000546000 U2AF1L5P0DN76 240 aaPredicted RBP22.75■■□□□ 1.23
CADM1-220ENST00000546000 U2AF1Q01081 240 aaKnown RBP eCLIP22.75■■□□□ 1.23
CADM1-220ENST00000546000 USHBP1Q8N6Y0 703 aa22.75■■□□□ 1.23
CADM1-220ENST00000546000 ERBB3P21860 1342 aa22.75■■□□□ 1.23
CADM1-220ENST00000546000 AEBP1Q8IUX7 1158 aa22.74■■□□□ 1.23
CADM1-220ENST00000546000 HMOX1P09601 288 aa22.73■■□□□ 1.23
CADM1-220ENST00000546000 CCDC146Q8IYE0 955 aa22.73■■□□□ 1.23
CADM1-220ENST00000546000 EYA1Q99502 592 aa22.73■■□□□ 1.23
CADM1-220ENST00000546000 BTG4Q9NY30 223 aa22.72■■□□□ 1.23
CADM1-220ENST00000546000 NUDCQ9Y266 331 aa22.72■■□□□ 1.23
CADM1-220ENST00000546000 YTHDC1Q96MU7 727 aaKnown RBP22.71■■□□□ 1.23
CADM1-220ENST00000546000 C8orf37Q96NL8 207 aa22.71■■□□□ 1.23
CADM1-220ENST00000546000 STRN4Q9NRL3 753 aa22.71■■□□□ 1.23
CADM1-220ENST00000546000 IGSF1Q8N6C5 1336 aa22.71■■□□□ 1.23
CADM1-220ENST00000546000 FAM208AQ9UK61 1670 aaKnown RBP22.71■■□□□ 1.23
CADM1-220ENST00000546000 CSB-PGBD3P0DP91 1061 aa22.7■■□□□ 1.22
CADM1-220ENST00000546000 NBPF6Q5VWK0 638 aa22.7■■□□□ 1.22
CADM1-220ENST00000546000 NBPF4Q96M43 638 aa22.7■■□□□ 1.22
CADM1-220ENST00000546000 SLIT2O94813 1529 aa22.69■■□□□ 1.22
CADM1-220ENST00000546000 SULT6B1Q6IMI4 303 aa22.68■■□□□ 1.22
CADM1-220ENST00000546000 LARP1Q6PKG0 1096 aaKnown RBP22.68■■□□□ 1.22
CADM1-220ENST00000546000 RSPH6AQ9H0K4 717 aa22.68■■□□□ 1.22
CADM1-220ENST00000546000 NWD2Q9ULI1 1742 aa22.68■■□□□ 1.22
CADM1-220ENST00000546000 MEX3CQ5U5Q3 659 aaKnown RBP22.67■■□□□ 1.22
CADM1-220ENST00000546000 NCAPD2Q15021 1401 aa22.66■■□□□ 1.22
CADM1-220ENST00000546000 WDR17Q8IZU2 1322 aa22.66■■□□□ 1.22
CADM1-220ENST00000546000 NLRP2Q9NX02 1062 aa22.66■■□□□ 1.22
CADM1-220ENST00000546000 PRKAR2BP31323 418 aa22.65■■□□□ 1.22
CADM1-220ENST00000546000 RGS17Q9UGC6 210 aaPredicted RBP22.65■■□□□ 1.22
CADM1-220ENST00000546000 KDRP35968 1356 aa22.63■■□□□ 1.21
CADM1-220ENST00000546000 EVA1CP58658 441 aa22.63■■□□□ 1.21
CADM1-220ENST00000546000 TOM1L2Q6ZVM7 507 aa22.63■■□□□ 1.21
CADM1-220ENST00000546000 NGLY1Q96IV0 654 aa22.63■■□□□ 1.21
CADM1-220ENST00000546000 BCL9LQ86UU0 1499 aa22.62■■□□□ 1.21
CADM1-220ENST00000546000 PLEKHF1Q96S99 279 aa22.62■■□□□ 1.21
CADM1-220ENST00000546000 MEGF6O75095 1541 aa22.62■■□□□ 1.21
CADM1-220ENST00000546000 CRB1P82279 1406 aa22.61■■□□□ 1.21
CADM1-220ENST00000546000 AFF2P51816 1311 aa22.6■■□□□ 1.21
CADM1-220ENST00000546000 RUNDC1Q96C34 613 aa22.59■■□□□ 1.21
CADM1-220ENST00000546000 PHACTR3Q96KR7 559 aa22.59■■□□□ 1.21
CADM1-220ENST00000546000 USP35Q9P2H5 1018 aa22.59■■□□□ 1.21
CADM1-220ENST00000546000 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.59■■□□□ 1.21
CADM1-220ENST00000546000 FCHSD2O94868 740 aa22.58■■□□□ 1.21
CADM1-220ENST00000546000 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.21
CADM1-220ENST00000546000 FNBP4Q8N3X1 1017 aaPredicted RBP22.58■■□□□ 1.21
CADM1-220ENST00000546000 RRP7AQ9Y3A4 280 aaKnown RBP22.58■■□□□ 1.21
CADM1-220ENST00000546000 WNK3Q9BYP7 1800 aa22.57■■□□□ 1.2
CADM1-220ENST00000546000 APAF1O14727 1248 aa22.57■■□□□ 1.2
CADM1-220ENST00000546000 UNC5CLQ8IV45 518 aa22.57■■□□□ 1.2
CADM1-220ENST00000546000 SALL2Q9Y467 1007 aaPredicted RBP22.57■■□□□ 1.2
CADM1-220ENST00000546000 CARD10Q9BWT7 1032 aa22.56■■□□□ 1.2
CADM1-220ENST00000546000 USP21Q9UK80 565 aa22.56■■□□□ 1.2
CADM1-220ENST00000546000 MAPK8IP3Q9UPT6 1336 aa22.56■■□□□ 1.2
CADM1-220ENST00000546000 TCP11L2Q8N4U5 519 aa22.54■■□□□ 1.2
CADM1-220ENST00000546000 CCDC9Q9Y3X0 531 aaKnown RBP22.53■■□□□ 1.2
CADM1-220ENST00000546000 PARP4Q9UKK3 1724 aaKnown RBP22.53■■□□□ 1.2
CADM1-220ENST00000546000 SPATA31A1Q5TZJ5 1347 aa22.53■■□□□ 1.2
CADM1-220ENST00000546000 DISP2A7MBM2 1401 aa22.52■■□□□ 1.2
CADM1-220ENST00000546000 NEUROD2Q15784 382 aa22.52■■□□□ 1.2
CADM1-220ENST00000546000 SPATA31A5Q5VU36 1347 aa22.52■■□□□ 1.2
CADM1-220ENST00000546000 SPATA31A7Q8IWB4 1347 aa22.52■■□□□ 1.2
CADM1-220ENST00000546000 OVOS2A0A0G2JMS6 1433 aa22.51■■□□□ 1.19
CADM1-220ENST00000546000 ATRNO75882 1429 aa22.51■■□□□ 1.19
CADM1-220ENST00000546000 PKD1L3Q7Z443 1732 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms